Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11005

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
2,349,341	-		RR42_RS11000	0.31	-1.7
2,349,341	-		RR42_RS11000	0.31	-1.0
2,349,382	+		RR42_RS11000	0.35	-1.2
2,349,439	+		RR42_RS11000	0.41	-0.0
2,349,439	+		RR42_RS11000	0.41	-1.2
2,349,439	+		RR42_RS11000	0.41	+0.6
2,349,440	-		RR42_RS11000	0.41	+0.3
2,349,440	-		RR42_RS11000	0.41	+2.0
2,349,440	-		RR42_RS11000	0.41	-1.4
2,349,440	-		RR42_RS11000	0.41	+0.2
2,349,646	+		RR42_RS11000	0.62	-0.9
2,349,749	-		RR42_RS11000	0.73	+0.5
2,349,796	+		RR42_RS11000	0.78	-0.6
2,349,797	-		RR42_RS11000	0.78	-0.5
2,350,175	+				+0.3
2,350,176	-				+0.0
2,350,206	-				+0.5
2,350,324	+				-0.3
2,350,324	+				+0.7
2,350,324	+				+0.2
2,350,324	+				-0.1
2,350,324	+				-2.3
2,350,324	+				+0.3
2,350,325	-				-0.5
2,350,325	-				+0.5
2,350,325	-				-1.2
2,350,325	-				-0.6
2,350,325	-				-0.3
2,350,325	-				-0.9
2,350,325	-				+1.3
2,350,509	-		RR42_RS11005	0.16	-0.9
2,350,672	+		RR42_RS11005	0.30	-1.7
2,350,672	+		RR42_RS11005	0.30	+0.5
2,350,673	-		RR42_RS11005	0.30	+0.4
2,350,844	+		RR42_RS11005	0.45	-0.6
2,350,844	+		RR42_RS11005	0.45	-0.6
2,350,844	+		RR42_RS11005	0.45	-1.0
2,350,844	+		RR42_RS11005	0.45	-1.2
2,351,001	+		RR42_RS11005	0.59	-0.8
2,351,002	-		RR42_RS11005	0.59	-0.2
2,351,473	+				-0.6
2,351,473	+				+0.3
2,351,473	+				-0.5
2,351,473	+				+1.4
2,351,473	+				+0.1
2,351,474	-				-0.2
2,351,787	+		RR42_RS11010	0.44	+0.6
2,351,787	+		RR42_RS11010	0.44	-0.6
2,351,787	+		RR42_RS11010	0.44	+0.0
2,351,788	-		RR42_RS11010	0.44	-0.9
2,351,859	+		RR42_RS11010	0.58	+0.1
2,351,918	+		RR42_RS11010	0.69	+1.0
2,351,919	-		RR42_RS11010	0.70	+1.4
2,351,934	+		RR42_RS11010	0.72	+0.6
2,351,934	+		RR42_RS11010	0.72	-0.9
2,351,934	+		RR42_RS11010	0.72	-0.1
2,351,935	-		RR42_RS11010	0.73	-0.8
2,351,935	-		RR42_RS11010	0.73	-0.9
2,351,964	-		RR42_RS11010	0.78	-1.5
2,351,964	-		RR42_RS11010	0.78	+0.3
2,352,212	-				-0.5
2,352,216	+				+0.6
2,352,216	+				+0.2
2,352,216	+				-1.0
2,352,216	+				-0.4