Experiment: R2A with Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS08570 and RR42_RS08575 are separated by 1 nucleotides RR42_RS08575 and RR42_RS08580 overlap by 8 nucleotides RR42_RS08580 and RR42_RS08585 overlap by 4 nucleotides
RR42_RS08570: RR42_RS08570 - hypothetical protein, at 1,801,344 to 1,802,915
_RS08570
RR42_RS08575: RR42_RS08575 - tail protein, at 1,802,917 to 1,803,465
_RS08575
RR42_RS08580: RR42_RS08580 - baseplate assembly protein, at 1,803,458 to 1,804,366
_RS08580
RR42_RS08585: RR42_RS08585 - baseplate assembly protein, at 1,804,363 to 1,804,707
_RS08585
Position (kb) 1802
1803
1804 Strain fitness (log2 ratio) -1
0
1 at 1802.106 kb on - strand, within RR42_RS08570 at 1802.240 kb on - strand, within RR42_RS08570 at 1802.256 kb on + strand, within RR42_RS08570 at 1802.677 kb on + strand, within RR42_RS08570 at 1802.943 kb on - strand at 1803.284 kb on + strand, within RR42_RS08575 at 1803.589 kb on - strand, within RR42_RS08580 at 1803.640 kb on - strand, within RR42_RS08580 at 1803.640 kb on - strand, within RR42_RS08580 at 1803.702 kb on + strand, within RR42_RS08580 at 1803.702 kb on + strand, within RR42_RS08580 at 1803.703 kb on - strand, within RR42_RS08580 at 1803.936 kb on + strand, within RR42_RS08580 at 1803.937 kb on - strand, within RR42_RS08580 at 1803.937 kb on - strand, within RR42_RS08580 at 1804.017 kb on - strand, within RR42_RS08580 at 1804.445 kb on - strand, within RR42_RS08585 at 1804.448 kb on + strand, within RR42_RS08585
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Thallium(I) acetate 0.001 mg/ml remove 1,802,106 - RR42_RS08570 0.48 +0.0 1,802,240 - RR42_RS08570 0.57 -0.4 1,802,256 + RR42_RS08570 0.58 +0.6 1,802,677 + RR42_RS08570 0.85 +0.8 1,802,943 - -0.2 1,803,284 + RR42_RS08575 0.67 -0.1 1,803,589 - RR42_RS08580 0.14 -0.7 1,803,640 - RR42_RS08580 0.20 +0.2 1,803,640 - RR42_RS08580 0.20 +0.5 1,803,702 + RR42_RS08580 0.27 +0.2 1,803,702 + RR42_RS08580 0.27 -0.4 1,803,703 - RR42_RS08580 0.27 +0.1 1,803,936 + RR42_RS08580 0.53 -1.4 1,803,937 - RR42_RS08580 0.53 -0.3 1,803,937 - RR42_RS08580 0.53 +0.5 1,804,017 - RR42_RS08580 0.61 +1.6 1,804,445 - RR42_RS08585 0.24 -1.3 1,804,448 + RR42_RS08585 0.25 -0.6
Or see this region's nucleotide sequence