Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07830

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
1,676,223	-		RR42_RS07825	0.51	+0.2
1,676,350	-		RR42_RS07825	0.61	+0.4
1,676,847	+				+0.5
1,676,848	-				+0.3
1,676,848	-				-0.1
1,676,911	-				-0.2
1,676,911	-				-0.3
1,676,937	+				+0.1
1,676,937	+				-0.5
1,676,938	-				-1.4
1,676,979	+				+2.0
1,677,088	+				-0.3
1,677,088	+				-0.1
1,677,108	-				-0.2
1,677,108	-				+0.8
1,677,108	-				+0.7
1,677,108	-				+0.0
1,677,108	-				+0.7
1,677,109	+				-0.1
1,677,109	+				+0.9
1,677,110	-				-0.4
1,677,110	-				-0.1
1,677,110	-				+0.7
1,677,169	+				-0.4
1,677,389	-		RR42_RS07830	0.21	-0.1
1,677,390	+		RR42_RS07830	0.22	+0.2
1,677,391	-		RR42_RS07830	0.22	-0.2
1,677,391	-		RR42_RS07830	0.22	+0.1
1,677,493	+		RR42_RS07830	0.29	+0.6
1,677,493	+		RR42_RS07830	0.29	-1.6
1,677,863	+		RR42_RS07830	0.55	+1.2
1,677,863	+		RR42_RS07830	0.55	-0.8
1,677,863	+		RR42_RS07830	0.55	-0.4
1,677,863	+		RR42_RS07830	0.55	-1.2
1,677,864	-		RR42_RS07830	0.55	-0.2
1,677,864	-		RR42_RS07830	0.55	+0.3
1,677,864	-		RR42_RS07830	0.55	-0.4
1,677,864	-		RR42_RS07830	0.55	-0.3
1,677,864	-		RR42_RS07830	0.55	-0.3
1,677,864	-		RR42_RS07830	0.55	-0.3
1,677,864	-		RR42_RS07830	0.55	-0.1
1,678,017	+		RR42_RS07830	0.66	-3.3
1,678,018	-		RR42_RS07830	0.66	-2.2
1,678,018	-		RR42_RS07830	0.66	+1.3
1,678,018	-		RR42_RS07830	0.66	-0.6
1,678,039	+		RR42_RS07830	0.68	+0.1
1,678,039	+		RR42_RS07830	0.68	+0.4
1,678,243	+		RR42_RS07830	0.82	-0.9
1,678,638	+				-0.6
1,678,638	+				-1.3
1,678,638	+				+0.9
1,678,639	-				+0.7
1,678,639	-				+0.3
1,678,639	-				-0.2
1,678,639	-				+0.0
1,678,639	-				-1.9
1,678,639	-				+0.3
1,678,639	-				-1.1
1,678,806	+		RR42_RS07835	0.18	-0.5
1,678,807	-		RR42_RS07835	0.18	+1.3
1,678,947	+		RR42_RS07835	0.29	-0.2
1,678,947	+		RR42_RS07835	0.29	+1.2
1,679,058	+		RR42_RS07835	0.38	+0.5
1,679,059	-		RR42_RS07835	0.38	+0.5
1,679,070	+		RR42_RS07835	0.38	+0.6
1,679,070	+		RR42_RS07835	0.38	+0.6
1,679,070	+		RR42_RS07835	0.38	-0.8
1,679,070	+		RR42_RS07835	0.38	+0.1
1,679,070	+		RR42_RS07835	0.38	+0.5
1,679,070	+		RR42_RS07835	0.38	+0.3
1,679,071	-		RR42_RS07835	0.39	+1.5
1,679,071	-		RR42_RS07835	0.39	+0.9
1,679,071	-		RR42_RS07835	0.39	+0.4
1,679,071	-		RR42_RS07835	0.39	-0.1
1,679,071	-		RR42_RS07835	0.39	-0.3
1,679,071	-		RR42_RS07835	0.39	+0.8
1,679,082	+		RR42_RS07835	0.39	-1.1
1,679,082	+		RR42_RS07835	0.39	-0.3
1,679,224	-		RR42_RS07835	0.50	-0.5
1,679,224	-		RR42_RS07835	0.50	+0.4
1,679,224	-		RR42_RS07835	0.50	+1.3
1,679,224	-		RR42_RS07835	0.50	+0.8
1,679,226	+		RR42_RS07835	0.50	-0.4
1,679,227	-		RR42_RS07835	0.50	+1.5
1,679,227	-		RR42_RS07835	0.50	-0.5