Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07520

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
1,605,912	+		RR42_RS07515	0.24	-0.1
1,605,912	+		RR42_RS07515	0.24	-0.6
1,605,912	+		RR42_RS07515	0.24	-1.5
1,605,913	-		RR42_RS07515	0.24	-0.1
1,605,913	-		RR42_RS07515	0.24	-1.1
1,606,050	+		RR42_RS07515	0.39	-0.6
1,606,061	+		RR42_RS07515	0.40	-1.4
1,606,062	-		RR42_RS07515	0.40	-0.9
1,606,129	+		RR42_RS07515	0.47	-1.6
1,606,130	-		RR42_RS07515	0.48	-2.9
1,606,130	-		RR42_RS07515	0.48	-0.1
1,606,189	+		RR42_RS07515	0.54	-0.9
1,606,189	+		RR42_RS07515	0.54	-0.6
1,606,679	+				-1.1
1,606,680	-				+0.4
1,606,680	-				+0.2
1,606,680	-				-0.1
1,606,680	-				-0.3
1,606,681	+				-0.7
1,606,682	-				-1.2
1,606,728	-				+1.2
1,606,728	-				-0.9
1,606,908	-				+0.1
1,606,908	-				-0.4
1,606,908	-				+0.6
1,606,913	+				+0.2
1,606,913	+				+1.1
1,606,914	-				+0.1
1,606,914	-				-0.6
1,606,914	-				-2.3
1,606,914	-				+0.5
1,606,916	+				-1.9
1,606,916	+				+0.1
1,606,917	-				+0.8
1,606,954	-				-0.1
1,607,016	+				-1.5
1,607,017	-				+0.9
1,607,232	+		RR42_RS07520	0.22	+0.8
1,607,232	+		RR42_RS07520	0.22	+0.1
1,607,233	-		RR42_RS07520	0.22	+0.8
1,607,233	-		RR42_RS07520	0.22	-0.5
1,607,233	-		RR42_RS07520	0.22	+0.2
1,607,233	-		RR42_RS07520	0.22	-0.1
1,607,233	-		RR42_RS07520	0.22	+0.2
1,607,233	-		RR42_RS07520	0.22	-0.3
1,607,303	+		RR42_RS07520	0.26	-1.6
1,607,304	-		RR42_RS07520	0.26	+0.1
1,607,457	+		RR42_RS07520	0.35	-0.1
1,607,457	+		RR42_RS07520	0.35	+1.4
1,607,533	-		RR42_RS07520	0.40	+0.7
1,607,533	-		RR42_RS07520	0.40	-0.5
1,607,740	+		RR42_RS07520	0.52	+0.6
1,607,740	+		RR42_RS07520	0.52	+1.4
1,607,740	+		RR42_RS07520	0.52	+1.5
1,607,740	+		RR42_RS07520	0.52	-0.8
1,607,741	-		RR42_RS07520	0.52	-0.6
1,607,741	-		RR42_RS07520	0.52	-0.3
1,607,741	-		RR42_RS07520	0.52	-0.4
1,607,741	-		RR42_RS07520	0.52	-1.1
1,607,741	-		RR42_RS07520	0.52	-0.1
1,607,741	-		RR42_RS07520	0.52	+1.0
1,607,743	-		RR42_RS07520	0.52	+0.9
1,607,743	-		RR42_RS07520	0.52	+0.1
1,607,743	-		RR42_RS07520	0.52	-0.2
1,608,063	+		RR42_RS07520	0.71	-1.8
1,608,129	+		RR42_RS07520	0.75	+0.0
1,608,129	+		RR42_RS07520	0.75	+0.9
1,608,129	+		RR42_RS07520	0.75	+0.0
1,608,129	+		RR42_RS07520	0.75	+0.1
1,608,129	+		RR42_RS07520	0.75	-1.5
1,608,130	-		RR42_RS07520	0.75	-0.5
1,608,130	-		RR42_RS07520	0.75	-0.9
1,608,150	+		RR42_RS07520	0.76	+0.8
1,608,160	-		RR42_RS07520	0.77	+0.0
1,608,160	-		RR42_RS07520	0.77	-0.1
1,608,179	+		RR42_RS07520	0.78	+0.0
1,608,180	-		RR42_RS07520	0.78	-0.8
1,608,180	-		RR42_RS07520	0.78	+0.2
1,608,180	-		RR42_RS07520	0.78	-2.6
1,608,201	+		RR42_RS07520	0.79	-1.0
1,608,201	+		RR42_RS07520	0.79	-2.6
1,608,201	+		RR42_RS07520	0.79	+0.5
1,608,201	+		RR42_RS07520	0.79	-0.4
1,608,201	+		RR42_RS07520	0.79	+0.5
1,608,201	+		RR42_RS07520	0.79	-1.2
1,608,202	-		RR42_RS07520	0.79	-0.4
1,608,202	-		RR42_RS07520	0.79	+0.5
1,608,202	-		RR42_RS07520	0.79	-0.7
1,608,202	-		RR42_RS07520	0.79	-1.3
1,608,202	-		RR42_RS07520	0.79	+1.1
1,608,202	-		RR42_RS07520	0.79	+0.2
1,608,202	-		RR42_RS07520	0.79	+1.5
1,608,202	-		RR42_RS07520	0.79	-0.2
1,608,205	+		RR42_RS07520	0.79	+0.4
1,608,205	+		RR42_RS07520	0.79	-0.3
1,608,205	+		RR42_RS07520	0.79	+0.5
1,608,205	+		RR42_RS07520	0.79	+1.2
1,608,206	-		RR42_RS07520	0.79	+0.4
1,608,206	-		RR42_RS07520	0.79	+0.3
1,608,395	+				-0.3
1,608,395	+				-0.5
1,608,395	+				-0.0
1,608,395	+				+0.1
1,608,396	-				-1.2
1,608,396	-				-0.2
1,608,396	-				-0.6
1,608,396	-				-0.3
1,608,396	-				+0.1
1,608,396	-				-1.6
1,608,399	+				-1.3
1,608,610	+				+0.5
1,608,618	+				-0.6
1,608,618	+				-0.1
1,608,619	-				-0.1
1,608,619	-				+0.5
1,608,710	+		RR42_RS07525	0.19	-0.2
1,608,710	+		RR42_RS07525	0.19	+0.9
1,608,770	+		RR42_RS07525	0.26	-0.1
1,608,770	+		RR42_RS07525	0.26	-0.1
1,609,126	+		RR42_RS07525	0.69	-0.1
1,609,127	-		RR42_RS07525	0.69	+1.2
1,609,282	+		RR42_RS07525	0.88	+0.1
1,609,357	-				+0.9
1,609,367	-				-0.6