Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS05725

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
1,257,800	-				+0.2
1,257,800	-				+0.0
1,257,803	+				-0.4
1,257,803	+				-0.1
1,257,803	+				-0.0
1,257,804	-				+1.7
1,257,804	-				+0.1
1,257,804	-				-0.7
1,257,804	-				-0.9
1,258,208	-		RR42_RS05720	0.49	+1.1
1,258,323	-		RR42_RS05720	0.61	+0.5
1,258,436	+		RR42_RS05720	0.73	-1.4
1,258,520	+		RR42_RS05720	0.82	-0.3
1,258,521	-		RR42_RS05720	0.82	-0.3
1,258,558	+		RR42_RS05720	0.86	+0.8
1,258,558	+		RR42_RS05720	0.86	-0.9
1,258,558	+		RR42_RS05720	0.86	+1.1
1,258,559	-		RR42_RS05720	0.86	+0.3
1,258,559	-		RR42_RS05720	0.86	+1.0
1,258,559	-		RR42_RS05720	0.86	-0.6
1,258,559	-		RR42_RS05720	0.86	+1.1
1,258,559	-		RR42_RS05720	0.86	-0.6
1,258,578	-		RR42_RS05720	0.88	+1.3
1,258,578	-		RR42_RS05720	0.88	+0.1
1,258,715	-				-0.7
1,258,715	-				-0.4
1,258,715	-				-0.4
1,258,715	-				-0.0
1,258,715	-				-0.6
1,258,790	-				+2.1
1,258,790	-				+0.3
1,259,191	-		RR42_RS05725	0.32	-1.6
1,259,191	-		RR42_RS05725	0.32	+0.0
1,259,191	-		RR42_RS05725	0.32	-0.2
1,259,408	+		RR42_RS05725	0.46	-1.3
1,259,417	+		RR42_RS05725	0.47	-0.5
1,259,417	+		RR42_RS05725	0.47	-0.8
1,260,147	+				-0.9
1,260,147	+				+0.2
1,260,280	-		RR42_RS05730	0.10	+0.1
1,260,545	-		RR42_RS05730	0.53	+0.3
1,260,545	-		RR42_RS05730	0.53	-0.3
1,260,545	-		RR42_RS05730	0.53	-0.3
1,260,684	+		RR42_RS05730	0.75	-0.6
1,260,684	+		RR42_RS05730	0.75	-0.1
1,260,684	+		RR42_RS05730	0.75	+0.8
1,260,684	+		RR42_RS05730	0.75	+1.7
1,260,684	+		RR42_RS05730	0.75	-0.1
1,260,684	+		RR42_RS05730	0.75	-1.0
1,260,685	-		RR42_RS05730	0.75	-0.0
1,260,685	-		RR42_RS05730	0.75	-2.0
1,260,690	+		RR42_RS05730	0.76	-1.8
1,260,690	+		RR42_RS05730	0.76	-0.9
1,260,691	-		RR42_RS05730	0.76	-1.2
1,260,848	+				-0.3
1,260,849	-				-0.6
1,260,849	-				-0.7
1,260,849	-				-0.2
1,260,850	+				-0.4
1,260,850	+				+0.1
1,260,850	+				+0.7
1,260,851	-				+0.6
1,260,851	-				-0.8
1,260,851	-				+0.1
1,260,851	-				+1.2
1,261,091	+		RR42_RS05735	0.10	+2.4
1,261,126	+		RR42_RS05735	0.12	+0.3