Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS05635

Experiment: R2A with Thallium(I) acetate 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.001 mg/ml
1,240,079	+		RR42_RS05630	0.42	-1.6
1,240,079	+		RR42_RS05630	0.42	+0.1
1,240,080	-		RR42_RS05630	0.42	-0.2
1,240,208	-		RR42_RS05630	0.53	-1.5
1,240,208	-		RR42_RS05630	0.53	-2.0
1,240,208	-		RR42_RS05630	0.53	+0.7
1,240,280	+		RR42_RS05630	0.58	-0.4
1,240,280	+		RR42_RS05630	0.58	-0.2
1,240,281	-		RR42_RS05630	0.58	+1.1
1,240,406	+		RR42_RS05630	0.68	+0.0
1,240,407	-		RR42_RS05630	0.68	+0.8
1,240,529	+		RR42_RS05630	0.78	-0.9
1,240,529	+		RR42_RS05630	0.78	-0.1
1,240,529	+		RR42_RS05630	0.78	-0.4
1,240,530	-		RR42_RS05630	0.78	-1.3
1,240,530	-		RR42_RS05630	0.78	+0.4
1,240,543	+		RR42_RS05630	0.79	+0.7
1,240,543	+		RR42_RS05630	0.79	-1.2
1,240,543	+		RR42_RS05630	0.79	-0.7
1,240,543	+		RR42_RS05630	0.79	-1.0
1,240,543	+		RR42_RS05630	0.79	-1.1
1,240,544	-		RR42_RS05630	0.79	+1.4
1,240,544	-		RR42_RS05630	0.79	+0.0
1,240,544	-		RR42_RS05630	0.79	-0.4
1,240,544	-		RR42_RS05630	0.79	-0.1
1,240,544	-		RR42_RS05630	0.79	+0.4
1,240,607	+		RR42_RS05630	0.84	-1.3
1,240,607	+		RR42_RS05630	0.84	+2.4
1,240,608	-		RR42_RS05630	0.84	-1.3
1,240,670	+		RR42_RS05630	0.89	-0.6
1,240,805	+				-1.5
1,240,806	-				-0.4
1,240,806	-				+0.1
1,240,991	-				+1.0
1,240,991	-				-0.5
1,241,004	+				+1.7
1,241,213	-		RR42_RS05635	0.11	-0.2
1,241,419	+		RR42_RS05635	0.24	-2.0
1,241,419	+		RR42_RS05635	0.24	+0.2
1,241,420	-		RR42_RS05635	0.24	+1.2
1,241,420	-		RR42_RS05635	0.24	+0.1
1,241,514	+		RR42_RS05635	0.30	+1.0
1,241,514	+		RR42_RS05635	0.30	-0.6
1,241,514	+		RR42_RS05635	0.30	+0.6
1,241,514	+		RR42_RS05635	0.30	-0.1
1,241,515	-		RR42_RS05635	0.30	-0.1
1,241,528	-		RR42_RS05635	0.31	+0.7
1,241,808	-		RR42_RS05635	0.48	-0.6
1,241,873	+		RR42_RS05635	0.53	+0.1
1,241,873	+		RR42_RS05635	0.53	-0.1
1,241,873	+		RR42_RS05635	0.53	+0.3
1,241,873	+		RR42_RS05635	0.53	+0.7
1,241,874	-		RR42_RS05635	0.53	-0.5
1,241,874	-		RR42_RS05635	0.53	+0.2
1,241,874	-		RR42_RS05635	0.53	-0.5
1,241,874	-		RR42_RS05635	0.53	+0.1
1,241,925	-		RR42_RS05635	0.56	+2.7
1,242,164	+		RR42_RS05635	0.71	+1.7
1,242,320	+		RR42_RS05635	0.81	+0.9
1,242,320	+		RR42_RS05635	0.81	-0.3
1,242,321	-		RR42_RS05635	0.81	-0.3
1,242,321	-		RR42_RS05635	0.81	+0.4
1,242,410	+		RR42_RS05635	0.86	+1.2
1,242,411	-		RR42_RS05635	0.86	-0.8
1,242,522	-				+0.5
1,242,880	+		RR42_RS05640	0.21	+0.3
1,242,931	+		RR42_RS05640	0.25	+0.2
1,242,946	+		RR42_RS05640	0.26	+2.1
1,242,946	+		RR42_RS05640	0.26	+1.2
1,242,947	-		RR42_RS05640	0.26	+0.1
1,242,947	-		RR42_RS05640	0.26	+0.3
1,242,979	+		RR42_RS05640	0.29	+0.2
1,242,980	-		RR42_RS05640	0.29	+0.1
1,243,150	+		RR42_RS05640	0.43	+0.4
1,243,150	+		RR42_RS05640	0.43	+0.4
1,243,151	-		RR42_RS05640	0.43	-0.5
1,243,180	+		RR42_RS05640	0.46	+1.6
1,243,181	-		RR42_RS05640	0.46	-0.4
1,243,181	-		RR42_RS05640	0.46	+0.1
1,243,348	+		RR42_RS05640	0.60	-1.1
1,243,423	+		RR42_RS05640	0.66	+0.7
1,243,423	+		RR42_RS05640	0.66	-0.2
1,243,423	+		RR42_RS05640	0.66	+0.5
1,243,562	+		RR42_RS05640	0.77	-0.3