Experiment: R2A with Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS03360 and RR42_RS03365 are separated by 103 nucleotides RR42_RS03365 and RR42_RS03370 are separated by 39 nucleotides
RR42_RS03360: RR42_RS03360 - fructose ABC transporter, ATPase component (FrcA) <small>(from data)</small>, at 746,637 to 748,250
_RS03360
RR42_RS03365: RR42_RS03365 - fructose ABC transporter, permease component (FrcC) <small>(from data)</small>, at 748,354 to 749,355
_RS03365
RR42_RS03370: RR42_RS03370 - fructose ABC transporter, substrate-binding component (FrcB) <small>(from data)</small>, at 749,395 to 750,372
_RS03370
Position (kb) 748
749
750 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 747.390 kb on + strand, within RR42_RS03360 at 747.390 kb on + strand, within RR42_RS03360 at 747.390 kb on + strand, within RR42_RS03360 at 747.675 kb on + strand, within RR42_RS03360 at 748.467 kb on - strand, within RR42_RS03365 at 748.875 kb on - strand, within RR42_RS03365 at 748.967 kb on - strand, within RR42_RS03365 at 749.038 kb on + strand, within RR42_RS03365 at 749.039 kb on - strand, within RR42_RS03365 at 749.095 kb on + strand, within RR42_RS03365 at 749.129 kb on - strand, within RR42_RS03365 at 749.278 kb on + strand at 749.278 kb on + strand at 749.278 kb on + strand at 749.554 kb on + strand, within RR42_RS03370 at 749.671 kb on - strand, within RR42_RS03370 at 750.040 kb on + strand, within RR42_RS03370 at 750.346 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Thallium(I) acetate 0.001 mg/ml remove 747,390 + RR42_RS03360 0.47 -1.3 747,390 + RR42_RS03360 0.47 -1.6 747,390 + RR42_RS03360 0.47 -0.7 747,675 + RR42_RS03360 0.64 -2.0 748,467 - RR42_RS03365 0.11 +0.7 748,875 - RR42_RS03365 0.52 -2.6 748,967 - RR42_RS03365 0.61 -0.4 749,038 + RR42_RS03365 0.68 -1.0 749,039 - RR42_RS03365 0.68 -0.0 749,095 + RR42_RS03365 0.74 -2.5 749,129 - RR42_RS03365 0.77 -1.5 749,278 + -0.1 749,278 + -1.2 749,278 + -0.3 749,554 + RR42_RS03370 0.16 -2.8 749,671 - RR42_RS03370 0.28 -0.6 750,040 + RR42_RS03370 0.66 -0.4 750,346 + -0.7
Or see this region's nucleotide sequence