Experiment: R2A with Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS02830 and RR42_RS02835 are separated by 480 nucleotides RR42_RS02835 and RR42_RS02840 overlap by 4 nucleotides
RR42_RS02830: RR42_RS02830 - glycyl-tRNA synthetase subunit alpha, at 629,777 to 630,727
_RS02830
RR42_RS02835: RR42_RS02835 - acyltransferase, at 631,208 to 632,815
_RS02835
RR42_RS02840: RR42_RS02840 - cation transporter, at 632,812 to 633,684
_RS02840
Position (kb) 631
632
633 Strain fitness (log2 ratio) -2
-1
0
1
2 at 630.739 kb on - strand at 630.742 kb on - strand at 630.742 kb on - strand at 630.879 kb on + strand at 630.880 kb on - strand at 630.880 kb on - strand at 630.880 kb on - strand at 630.880 kb on - strand at 630.880 kb on - strand at 630.880 kb on - strand at 630.880 kb on - strand at 630.880 kb on - strand at 630.963 kb on + strand at 630.963 kb on + strand at 630.999 kb on + strand at 631.007 kb on - strand at 631.010 kb on - strand at 631.096 kb on + strand at 631.097 kb on - strand at 631.204 kb on - strand at 632.816 kb on - strand at 633.183 kb on - strand, within RR42_RS02840 at 633.241 kb on - strand, within RR42_RS02840 at 633.315 kb on - strand, within RR42_RS02840 at 633.315 kb on - strand, within RR42_RS02840 at 633.318 kb on - strand, within RR42_RS02840 at 633.375 kb on - strand, within RR42_RS02840 at 633.500 kb on - strand, within RR42_RS02840 at 633.726 kb on + strand at 633.726 kb on + strand at 633.726 kb on + strand at 633.727 kb on - strand at 633.727 kb on - strand at 633.727 kb on - strand at 633.727 kb on - strand at 633.727 kb on - strand at 633.799 kb on + strand at 633.799 kb on + strand at 633.800 kb on - strand at 633.800 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Thallium(I) acetate 0.001 mg/ml remove 630,739 - +1.4 630,742 - -1.1 630,742 - +0.6 630,879 + -0.0 630,880 - -0.2 630,880 - -0.7 630,880 - -0.2 630,880 - -0.4 630,880 - +1.4 630,880 - -0.8 630,880 - -0.2 630,880 - +0.1 630,963 + -0.2 630,963 + +0.1 630,999 + -0.8 631,007 - +0.4 631,010 - -0.8 631,096 + +0.7 631,097 - -1.4 631,204 - -0.5 632,816 - +0.7 633,183 - RR42_RS02840 0.42 -0.4 633,241 - RR42_RS02840 0.49 -1.9 633,315 - RR42_RS02840 0.58 -0.2 633,315 - RR42_RS02840 0.58 -0.1 633,318 - RR42_RS02840 0.58 -1.2 633,375 - RR42_RS02840 0.64 +0.5 633,500 - RR42_RS02840 0.79 -0.1 633,726 + +1.9 633,726 + -1.1 633,726 + +0.9 633,727 - +0.0 633,727 - +0.8 633,727 - +0.1 633,727 - +0.2 633,727 - +0.4 633,799 + +0.5 633,799 + +0.0 633,800 - -0.2 633,800 - +0.3
Or see this region's nucleotide sequence