Experiment: R2A with Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS02415 and RR42_RS02420 are separated by 98 nucleotides RR42_RS02420 and RR42_RS02425 are separated by 35 nucleotides RR42_RS02425 and RR42_RS02430 are separated by 448 nucleotides
RR42_RS02415: RR42_RS02415 - ubiquinone biosynthesis protein UbiB, at 543,395 to 544,972
_RS02415
RR42_RS02420: RR42_RS02420 - SAM-dependent methyltransferase, at 545,071 to 545,706
_RS02420
RR42_RS02425: RR42_RS02425 - hypothetical protein, at 545,742 to 546,350
_RS02425
RR42_RS02430: RR42_RS02430 - sodium:solute symporter, at 546,799 to 548,235
_RS02430
Position (kb) 545
546
547 Strain fitness (log2 ratio) -2
-1
0
1
2 at 544.971 kb on - strand at 544.982 kb on + strand at 544.982 kb on + strand at 544.983 kb on - strand at 545.437 kb on + strand, within RR42_RS02420 at 545.661 kb on - strand at 545.704 kb on + strand at 545.776 kb on + strand at 545.777 kb on - strand at 545.967 kb on - strand, within RR42_RS02425 at 546.038 kb on + strand, within RR42_RS02425 at 546.038 kb on + strand, within RR42_RS02425 at 546.039 kb on - strand, within RR42_RS02425 at 546.433 kb on + strand at 546.434 kb on - strand at 546.471 kb on + strand at 546.471 kb on + strand at 546.471 kb on + strand at 546.472 kb on - strand at 546.472 kb on - strand at 546.481 kb on - strand at 546.643 kb on - strand at 546.645 kb on - strand at 546.678 kb on + strand at 546.916 kb on + strand at 546.916 kb on + strand at 546.916 kb on + strand at 546.916 kb on + strand at 546.916 kb on + strand at 546.916 kb on + strand at 546.917 kb on - strand at 546.917 kb on - strand at 546.917 kb on - strand at 546.917 kb on - strand at 546.917 kb on - strand at 546.918 kb on + strand at 546.918 kb on + strand at 547.079 kb on - strand, within RR42_RS02430 at 547.108 kb on + strand, within RR42_RS02430 at 547.111 kb on + strand, within RR42_RS02430
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Thallium(I) acetate 0.001 mg/ml remove 544,971 - -0.7 544,982 + +1.5 544,982 + +1.9 544,983 - +0.1 545,437 + RR42_RS02420 0.58 -1.3 545,661 - +1.3 545,704 + -1.5 545,776 + +0.5 545,777 - +0.5 545,967 - RR42_RS02425 0.37 -1.2 546,038 + RR42_RS02425 0.49 +1.7 546,038 + RR42_RS02425 0.49 +1.6 546,039 - RR42_RS02425 0.49 +0.1 546,433 + -1.3 546,434 - -0.5 546,471 + +0.3 546,471 + -0.2 546,471 + +0.7 546,472 - -0.9 546,472 - +1.0 546,481 - +0.3 546,643 - +1.5 546,645 - +0.9 546,678 + +1.9 546,916 + +0.1 546,916 + +0.2 546,916 + +0.2 546,916 + +1.5 546,916 + -0.2 546,916 + -0.0 546,917 - +0.2 546,917 - +0.2 546,917 - -0.5 546,917 - +0.4 546,917 - -2.0 546,918 + +1.3 546,918 + +0.7 547,079 - RR42_RS02430 0.19 -1.1 547,108 + RR42_RS02430 0.22 +0.3 547,111 + RR42_RS02430 0.22 +0.5
Or see this region's nucleotide sequence