Experiment: R2A with Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS01340 and RR42_RS01345 are separated by 1 nucleotides RR42_RS01345 and RR42_RS01350 are separated by 53 nucleotides
RR42_RS01340: RR42_RS01340 - hypothetical protein, at 304,575 to 305,597
_RS01340
RR42_RS01345: RR42_RS01345 - CoA-binding protein, at 305,599 to 307,710
_RS01345
RR42_RS01350: RR42_RS01350 - biotin carboxylase, at 307,764 to 309,137
_RS01350
Position (kb) 305
306
307
308 Strain fitness (log2 ratio) -2
-1
0
1
2 at 305.120 kb on + strand, within RR42_RS01340 at 305.120 kb on + strand, within RR42_RS01340 at 305.120 kb on + strand, within RR42_RS01340 at 305.120 kb on + strand, within RR42_RS01340 at 305.120 kb on + strand, within RR42_RS01340 at 305.121 kb on - strand, within RR42_RS01340 at 305.168 kb on + strand, within RR42_RS01340 at 305.175 kb on + strand, within RR42_RS01340 at 305.175 kb on + strand, within RR42_RS01340 at 305.176 kb on - strand, within RR42_RS01340 at 305.361 kb on + strand, within RR42_RS01340 at 305.388 kb on + strand, within RR42_RS01340 at 305.388 kb on + strand, within RR42_RS01340 at 305.388 kb on + strand, within RR42_RS01340 at 305.389 kb on - strand, within RR42_RS01340 at 305.389 kb on - strand, within RR42_RS01340 at 305.695 kb on + strand at 305.696 kb on - strand at 305.696 kb on - strand at 305.696 kb on - strand at 305.728 kb on + strand at 305.893 kb on + strand, within RR42_RS01345 at 305.893 kb on + strand, within RR42_RS01345 at 305.893 kb on + strand, within RR42_RS01345 at 305.894 kb on - strand, within RR42_RS01345 at 305.994 kb on + strand, within RR42_RS01345 at 305.995 kb on - strand, within RR42_RS01345 at 306.158 kb on - strand, within RR42_RS01345 at 306.160 kb on - strand, within RR42_RS01345 at 306.250 kb on + strand, within RR42_RS01345 at 306.251 kb on - strand, within RR42_RS01345 at 306.487 kb on - strand, within RR42_RS01345 at 306.551 kb on + strand, within RR42_RS01345 at 306.552 kb on - strand, within RR42_RS01345 at 306.699 kb on + strand, within RR42_RS01345 at 306.703 kb on + strand, within RR42_RS01345 at 306.703 kb on + strand, within RR42_RS01345 at 307.038 kb on - strand, within RR42_RS01345 at 307.309 kb on + strand, within RR42_RS01345 at 307.310 kb on - strand, within RR42_RS01345 at 307.384 kb on + strand, within RR42_RS01345 at 307.384 kb on + strand, within RR42_RS01345 at 307.385 kb on - strand, within RR42_RS01345 at 307.434 kb on - strand, within RR42_RS01345 at 307.643 kb on + strand at 307.643 kb on + strand at 307.644 kb on - strand at 307.739 kb on - strand at 307.739 kb on - strand at 307.872 kb on + strand at 307.929 kb on + strand, within RR42_RS01350
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Thallium(I) acetate 0.001 mg/ml remove 305,120 + RR42_RS01340 0.53 -0.3 305,120 + RR42_RS01340 0.53 -1.7 305,120 + RR42_RS01340 0.53 -0.1 305,120 + RR42_RS01340 0.53 -1.1 305,120 + RR42_RS01340 0.53 -0.6 305,121 - RR42_RS01340 0.53 +0.8 305,168 + RR42_RS01340 0.58 +0.9 305,175 + RR42_RS01340 0.59 -0.0 305,175 + RR42_RS01340 0.59 -1.4 305,176 - RR42_RS01340 0.59 -0.3 305,361 + RR42_RS01340 0.77 +0.5 305,388 + RR42_RS01340 0.79 -0.7 305,388 + RR42_RS01340 0.79 +0.4 305,388 + RR42_RS01340 0.79 -0.5 305,389 - RR42_RS01340 0.80 +0.3 305,389 - RR42_RS01340 0.80 +0.4 305,695 + -1.1 305,696 - -1.9 305,696 - +0.0 305,696 - -0.8 305,728 + +0.7 305,893 + RR42_RS01345 0.14 -1.0 305,893 + RR42_RS01345 0.14 -0.2 305,893 + RR42_RS01345 0.14 -0.6 305,894 - RR42_RS01345 0.14 -0.4 305,994 + RR42_RS01345 0.19 +1.2 305,995 - RR42_RS01345 0.19 +1.0 306,158 - RR42_RS01345 0.26 -0.3 306,160 - RR42_RS01345 0.27 +0.4 306,250 + RR42_RS01345 0.31 -0.2 306,251 - RR42_RS01345 0.31 -0.8 306,487 - RR42_RS01345 0.42 -0.7 306,551 + RR42_RS01345 0.45 +2.0 306,552 - RR42_RS01345 0.45 -0.8 306,699 + RR42_RS01345 0.52 -0.1 306,703 + RR42_RS01345 0.52 -0.6 306,703 + RR42_RS01345 0.52 +0.0 307,038 - RR42_RS01345 0.68 -0.8 307,309 + RR42_RS01345 0.81 +1.2 307,310 - RR42_RS01345 0.81 +0.1 307,384 + RR42_RS01345 0.85 -0.9 307,384 + RR42_RS01345 0.85 -1.0 307,385 - RR42_RS01345 0.85 -0.3 307,434 - RR42_RS01345 0.87 -2.1 307,643 + +0.2 307,643 + -0.4 307,644 - +0.6 307,739 - -0.0 307,739 - -0.7 307,872 + -0.8 307,929 + RR42_RS01350 0.12 -0.2
Or see this region's nucleotide sequence