Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5017 and Pf6N2E2_5018 are separated by 215 nucleotides Pf6N2E2_5018 and Pf6N2E2_5019 overlap by 21 nucleotides Pf6N2E2_5019 and Pf6N2E2_5020 overlap by 14 nucleotides Pf6N2E2_5020 and Pf6N2E2_5021 are separated by 185 nucleotides
Pf6N2E2_5017 - Phosphate starvation-inducible protein PhoH, predicted ATPase, at 5,783,463 to 5,784,473
_5017
Pf6N2E2_5018 - tRNA-i(6)A37 methylthiotransferase, at 5,784,689 to 5,786,053
_5018
Pf6N2E2_5019 - hypothetical protein, at 5,786,033 to 5,786,164
_5019
Pf6N2E2_5020 - FIG00955339: hypothetical protein, at 5,786,151 to 5,786,480
_5020
Pf6N2E2_5021 - FOG: TPR repeat, SEL1 subfamily, at 5,786,666 to 5,787,220
_5021
Position (kb)
5784
5785
5786
5787 Strain fitness (log2 ratio)
-2
-1
0
1 at 5783.807 kb on - strand, within Pf6N2E2_5017 at 5783.807 kb on - strand, within Pf6N2E2_5017 at 5783.807 kb on - strand, within Pf6N2E2_5017 at 5783.807 kb on - strand, within Pf6N2E2_5017 at 5783.807 kb on - strand, within Pf6N2E2_5017 at 5783.891 kb on - strand, within Pf6N2E2_5017 at 5783.906 kb on - strand, within Pf6N2E2_5017 at 5783.906 kb on - strand, within Pf6N2E2_5017 at 5784.041 kb on - strand, within Pf6N2E2_5017 at 5784.041 kb on - strand, within Pf6N2E2_5017 at 5784.041 kb on - strand, within Pf6N2E2_5017 at 5784.107 kb on - strand, within Pf6N2E2_5017 at 5784.107 kb on - strand, within Pf6N2E2_5017 at 5784.107 kb on - strand, within Pf6N2E2_5017 at 5784.502 kb on - strand at 5784.528 kb on - strand at 5784.548 kb on + strand at 5784.548 kb on + strand at 5784.634 kb on + strand at 5784.635 kb on - strand at 5784.635 kb on - strand at 5785.005 kb on + strand, within Pf6N2E2_5018 at 5785.005 kb on + strand, within Pf6N2E2_5018 at 5785.006 kb on - strand, within Pf6N2E2_5018 at 5785.006 kb on - strand, within Pf6N2E2_5018 at 5785.017 kb on + strand, within Pf6N2E2_5018 at 5785.017 kb on + strand, within Pf6N2E2_5018 at 5785.018 kb on - strand, within Pf6N2E2_5018 at 5785.018 kb on - strand, within Pf6N2E2_5018 at 5785.018 kb on - strand, within Pf6N2E2_5018 at 5785.100 kb on - strand, within Pf6N2E2_5018 at 5785.100 kb on - strand, within Pf6N2E2_5018 at 5785.161 kb on + strand, within Pf6N2E2_5018 at 5785.515 kb on + strand, within Pf6N2E2_5018 at 5785.515 kb on + strand, within Pf6N2E2_5018 at 5785.516 kb on - strand, within Pf6N2E2_5018 at 5785.539 kb on + strand, within Pf6N2E2_5018 at 5785.539 kb on + strand, within Pf6N2E2_5018 at 5785.539 kb on + strand, within Pf6N2E2_5018 at 5785.539 kb on + strand, within Pf6N2E2_5018 at 5785.569 kb on + strand, within Pf6N2E2_5018 at 5785.569 kb on + strand, within Pf6N2E2_5018 at 5785.569 kb on + strand, within Pf6N2E2_5018 at 5785.569 kb on + strand, within Pf6N2E2_5018 at 5785.569 kb on + strand, within Pf6N2E2_5018 at 5785.570 kb on - strand, within Pf6N2E2_5018 at 5785.570 kb on - strand, within Pf6N2E2_5018 at 5785.726 kb on - strand, within Pf6N2E2_5018 at 5785.839 kb on + strand, within Pf6N2E2_5018 at 5785.840 kb on - strand, within Pf6N2E2_5018 at 5785.840 kb on - strand, within Pf6N2E2_5018 at 5785.969 kb on - strand at 5786.001 kb on + strand at 5786.001 kb on + strand at 5786.001 kb on + strand at 5786.001 kb on + strand at 5786.054 kb on + strand, within Pf6N2E2_5019 at 5786.054 kb on + strand, within Pf6N2E2_5019 at 5786.055 kb on - strand, within Pf6N2E2_5019 at 5786.055 kb on - strand, within Pf6N2E2_5019 at 5786.055 kb on - strand, within Pf6N2E2_5019 at 5786.056 kb on + strand, within Pf6N2E2_5019 at 5786.056 kb on + strand, within Pf6N2E2_5019 at 5786.056 kb on + strand, within Pf6N2E2_5019 at 5786.056 kb on + strand, within Pf6N2E2_5019 at 5786.056 kb on + strand, within Pf6N2E2_5019 at 5786.056 kb on + strand, within Pf6N2E2_5019 at 5786.056 kb on + strand, within Pf6N2E2_5019 at 5786.057 kb on - strand, within Pf6N2E2_5019 at 5786.057 kb on - strand, within Pf6N2E2_5019 at 5786.100 kb on + strand, within Pf6N2E2_5019 at 5786.100 kb on + strand, within Pf6N2E2_5019 at 5786.101 kb on - strand, within Pf6N2E2_5019 at 5786.101 kb on - strand, within Pf6N2E2_5019 at 5786.105 kb on + strand, within Pf6N2E2_5019 at 5786.105 kb on + strand, within Pf6N2E2_5019 at 5786.105 kb on + strand, within Pf6N2E2_5019 at 5786.105 kb on + strand, within Pf6N2E2_5019 at 5786.105 kb on + strand, within Pf6N2E2_5019 at 5786.105 kb on + strand, within Pf6N2E2_5019 at 5786.105 kb on + strand, within Pf6N2E2_5019 at 5786.106 kb on - strand, within Pf6N2E2_5019 at 5786.106 kb on - strand, within Pf6N2E2_5019 at 5786.106 kb on - strand, within Pf6N2E2_5019 at 5786.107 kb on + strand, within Pf6N2E2_5019 at 5786.107 kb on + strand, within Pf6N2E2_5019 at 5786.107 kb on + strand, within Pf6N2E2_5019 at 5786.107 kb on + strand, within Pf6N2E2_5019 at 5786.107 kb on + strand, within Pf6N2E2_5019 at 5786.108 kb on - strand, within Pf6N2E2_5019 at 5786.108 kb on - strand, within Pf6N2E2_5019 at 5786.108 kb on - strand, within Pf6N2E2_5019 at 5786.108 kb on - strand, within Pf6N2E2_5019 at 5786.108 kb on - strand, within Pf6N2E2_5019 at 5786.108 kb on - strand, within Pf6N2E2_5019 at 5786.175 kb on + strand at 5786.175 kb on + strand at 5786.175 kb on + strand at 5786.175 kb on + strand at 5786.175 kb on + strand at 5786.175 kb on + strand at 5786.176 kb on - strand at 5786.176 kb on - strand at 5786.176 kb on - strand at 5786.218 kb on - strand, within Pf6N2E2_5020 at 5786.232 kb on + strand, within Pf6N2E2_5020 at 5786.232 kb on + strand, within Pf6N2E2_5020 at 5786.233 kb on - strand, within Pf6N2E2_5020 at 5786.233 kb on - strand, within Pf6N2E2_5020 at 5786.233 kb on - strand, within Pf6N2E2_5020 at 5786.478 kb on + strand at 5786.478 kb on + strand at 5786.478 kb on + strand at 5786.478 kb on + strand at 5786.478 kb on + strand at 5786.478 kb on + strand at 5786.478 kb on + strand at 5786.479 kb on - strand at 5786.479 kb on - strand at 5786.479 kb on - strand at 5786.479 kb on - strand at 5786.479 kb on - strand at 5786.492 kb on + strand at 5786.492 kb on + strand at 5786.527 kb on - strand at 5786.527 kb on - strand at 5786.626 kb on + strand at 5786.627 kb on - strand at 5786.689 kb on + strand at 5786.689 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 5,783,807 - Pf6N2E2_5017 0.34 +0.4 5,783,807 - Pf6N2E2_5017 0.34 +0.2 5,783,807 - Pf6N2E2_5017 0.34 -0.0 5,783,807 - Pf6N2E2_5017 0.34 -0.1 5,783,807 - Pf6N2E2_5017 0.34 +1.2 5,783,891 - Pf6N2E2_5017 0.42 -0.9 5,783,906 - Pf6N2E2_5017 0.44 +0.4 5,783,906 - Pf6N2E2_5017 0.44 +0.8 5,784,041 - Pf6N2E2_5017 0.57 +0.2 5,784,041 - Pf6N2E2_5017 0.57 +1.1 5,784,041 - Pf6N2E2_5017 0.57 +0.7 5,784,107 - Pf6N2E2_5017 0.64 -0.5 5,784,107 - Pf6N2E2_5017 0.64 +0.9 5,784,107 - Pf6N2E2_5017 0.64 +1.6 5,784,502 - -0.2 5,784,528 - +0.6 5,784,548 + +0.8 5,784,548 + +0.1 5,784,634 + +0.1 5,784,635 - -0.2 5,784,635 - +0.0 5,785,005 + Pf6N2E2_5018 0.23 +0.5 5,785,005 + Pf6N2E2_5018 0.23 +0.1 5,785,006 - Pf6N2E2_5018 0.23 -1.4 5,785,006 - Pf6N2E2_5018 0.23 -1.8 5,785,017 + Pf6N2E2_5018 0.24 +0.1 5,785,017 + Pf6N2E2_5018 0.24 +1.0 5,785,018 - Pf6N2E2_5018 0.24 +0.2 5,785,018 - Pf6N2E2_5018 0.24 -0.1 5,785,018 - Pf6N2E2_5018 0.24 -0.2 5,785,100 - Pf6N2E2_5018 0.30 +0.6 5,785,100 - Pf6N2E2_5018 0.30 +1.0 5,785,161 + Pf6N2E2_5018 0.35 +1.2 5,785,515 + Pf6N2E2_5018 0.61 -0.3 5,785,515 + Pf6N2E2_5018 0.61 -1.1 5,785,516 - Pf6N2E2_5018 0.61 -0.5 5,785,539 + Pf6N2E2_5018 0.62 -0.5 5,785,539 + Pf6N2E2_5018 0.62 -0.6 5,785,539 + Pf6N2E2_5018 0.62 -0.2 5,785,539 + Pf6N2E2_5018 0.62 -0.6 5,785,569 + Pf6N2E2_5018 0.64 -1.4 5,785,569 + Pf6N2E2_5018 0.64 -1.9 5,785,569 + Pf6N2E2_5018 0.64 +0.5 5,785,569 + Pf6N2E2_5018 0.64 +0.9 5,785,569 + Pf6N2E2_5018 0.64 +0.3 5,785,570 - Pf6N2E2_5018 0.65 +0.4 5,785,570 - Pf6N2E2_5018 0.65 -0.4 5,785,726 - Pf6N2E2_5018 0.76 -0.5 5,785,839 + Pf6N2E2_5018 0.84 +1.2 5,785,840 - Pf6N2E2_5018 0.84 -1.4 5,785,840 - Pf6N2E2_5018 0.84 -0.9 5,785,969 - -1.6 5,786,001 + +1.3 5,786,001 + +0.0 5,786,001 + +0.0 5,786,001 + -1.9 5,786,054 + Pf6N2E2_5019 0.16 +1.0 5,786,054 + Pf6N2E2_5019 0.16 -0.2 5,786,055 - Pf6N2E2_5019 0.17 -0.0 5,786,055 - Pf6N2E2_5019 0.17 -1.1 5,786,055 - Pf6N2E2_5019 0.17 +0.5 5,786,056 + Pf6N2E2_5019 0.17 -0.1 5,786,056 + Pf6N2E2_5019 0.17 +0.7 5,786,056 + Pf6N2E2_5019 0.17 +0.5 5,786,056 + Pf6N2E2_5019 0.17 -0.5 5,786,056 + Pf6N2E2_5019 0.17 +0.6 5,786,056 + Pf6N2E2_5019 0.17 -0.8 5,786,056 + Pf6N2E2_5019 0.17 -0.8 5,786,057 - Pf6N2E2_5019 0.18 -1.0 5,786,057 - Pf6N2E2_5019 0.18 +0.5 5,786,100 + Pf6N2E2_5019 0.51 +1.3 5,786,100 + Pf6N2E2_5019 0.51 +0.4 5,786,101 - Pf6N2E2_5019 0.52 +1.2 5,786,101 - Pf6N2E2_5019 0.52 +1.1 5,786,105 + Pf6N2E2_5019 0.55 -0.3 5,786,105 + Pf6N2E2_5019 0.55 -0.5 5,786,105 + Pf6N2E2_5019 0.55 -2.1 5,786,105 + Pf6N2E2_5019 0.55 -0.1 5,786,105 + Pf6N2E2_5019 0.55 -1.4 5,786,105 + Pf6N2E2_5019 0.55 -1.1 5,786,105 + Pf6N2E2_5019 0.55 +0.5 5,786,106 - Pf6N2E2_5019 0.55 +0.0 5,786,106 - Pf6N2E2_5019 0.55 +0.8 5,786,106 - Pf6N2E2_5019 0.55 -0.5 5,786,107 + Pf6N2E2_5019 0.56 -1.8 5,786,107 + Pf6N2E2_5019 0.56 -0.2 5,786,107 + Pf6N2E2_5019 0.56 +1.7 5,786,107 + Pf6N2E2_5019 0.56 -0.0 5,786,107 + Pf6N2E2_5019 0.56 +1.0 5,786,108 - Pf6N2E2_5019 0.57 -0.5 5,786,108 - Pf6N2E2_5019 0.57 +1.2 5,786,108 - Pf6N2E2_5019 0.57 -0.2 5,786,108 - Pf6N2E2_5019 0.57 -0.9 5,786,108 - Pf6N2E2_5019 0.57 -0.0 5,786,108 - Pf6N2E2_5019 0.57 -0.8 5,786,175 + -1.0 5,786,175 + -0.5 5,786,175 + -0.9 5,786,175 + -0.8 5,786,175 + -2.4 5,786,175 + -0.5 5,786,176 - -0.8 5,786,176 - +1.0 5,786,176 - +0.4 5,786,218 - Pf6N2E2_5020 0.20 -0.2 5,786,232 + Pf6N2E2_5020 0.25 -0.1 5,786,232 + Pf6N2E2_5020 0.25 +0.0 5,786,233 - Pf6N2E2_5020 0.25 -0.9 5,786,233 - Pf6N2E2_5020 0.25 +0.8 5,786,233 - Pf6N2E2_5020 0.25 -0.7 5,786,478 + -0.1 5,786,478 + +1.2 5,786,478 + +0.5 5,786,478 + -0.0 5,786,478 + -0.5 5,786,478 + +0.3 5,786,478 + -0.7 5,786,479 - -0.6 5,786,479 - -0.9 5,786,479 - +0.6 5,786,479 - +0.1 5,786,479 - +1.1 5,786,492 + +0.6 5,786,492 + -0.9 5,786,527 - +0.4 5,786,527 - +1.2 5,786,626 + -0.1 5,786,627 - -0.2 5,786,689 + -0.2 5,786,689 + -0.5
Or see this region's nucleotide sequence