Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4096 and Pf6N2E2_4097 are separated by 162 nucleotides Pf6N2E2_4097 and Pf6N2E2_4098 are separated by 408 nucleotides
Pf6N2E2_4096 - Sulfate transporter family protein in cluster with carbonic anhydrase, at 4,775,717 to 4,777,243
_4096
Pf6N2E2_4097 - FIG00953365: hypothetical protein, at 4,777,406 to 4,778,056
_4097
Pf6N2E2_4098 - Cytochrome c oxidase polypeptide II (EC 1.9.3.1), at 4,778,465 to 4,779,556
_4098
Position (kb)
4777
4778
4779 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4776.511 kb on + strand, within Pf6N2E2_4096 at 4776.511 kb on + strand, within Pf6N2E2_4096 at 4776.511 kb on + strand, within Pf6N2E2_4096 at 4776.512 kb on - strand, within Pf6N2E2_4096 at 4776.512 kb on - strand, within Pf6N2E2_4096 at 4776.512 kb on - strand, within Pf6N2E2_4096 at 4776.562 kb on + strand, within Pf6N2E2_4096 at 4776.563 kb on - strand, within Pf6N2E2_4096 at 4776.563 kb on - strand, within Pf6N2E2_4096 at 4776.649 kb on + strand, within Pf6N2E2_4096 at 4776.761 kb on + strand, within Pf6N2E2_4096 at 4776.761 kb on + strand, within Pf6N2E2_4096 at 4776.761 kb on + strand, within Pf6N2E2_4096 at 4776.762 kb on - strand, within Pf6N2E2_4096 at 4776.762 kb on - strand, within Pf6N2E2_4096 at 4777.047 kb on + strand, within Pf6N2E2_4096 at 4777.047 kb on + strand, within Pf6N2E2_4096 at 4777.048 kb on - strand, within Pf6N2E2_4096 at 4777.048 kb on - strand, within Pf6N2E2_4096 at 4777.091 kb on + strand at 4777.091 kb on + strand at 4777.091 kb on + strand at 4777.091 kb on + strand at 4777.092 kb on - strand at 4777.092 kb on - strand at 4777.092 kb on - strand at 4777.092 kb on - strand at 4777.092 kb on - strand at 4777.388 kb on - strand at 4777.388 kb on - strand at 4777.496 kb on - strand, within Pf6N2E2_4097 at 4777.520 kb on + strand, within Pf6N2E2_4097 at 4777.521 kb on - strand, within Pf6N2E2_4097 at 4777.681 kb on + strand, within Pf6N2E2_4097 at 4777.681 kb on + strand, within Pf6N2E2_4097 at 4777.681 kb on + strand, within Pf6N2E2_4097 at 4777.681 kb on + strand, within Pf6N2E2_4097 at 4777.681 kb on + strand, within Pf6N2E2_4097 at 4777.681 kb on + strand, within Pf6N2E2_4097 at 4777.681 kb on + strand, within Pf6N2E2_4097 at 4777.681 kb on + strand, within Pf6N2E2_4097 at 4777.682 kb on - strand, within Pf6N2E2_4097 at 4777.682 kb on - strand, within Pf6N2E2_4097 at 4777.682 kb on - strand, within Pf6N2E2_4097 at 4777.683 kb on + strand, within Pf6N2E2_4097 at 4777.683 kb on + strand, within Pf6N2E2_4097 at 4777.683 kb on + strand, within Pf6N2E2_4097 at 4777.683 kb on + strand, within Pf6N2E2_4097 at 4777.683 kb on + strand, within Pf6N2E2_4097 at 4777.683 kb on + strand, within Pf6N2E2_4097 at 4777.683 kb on + strand, within Pf6N2E2_4097 at 4777.684 kb on - strand, within Pf6N2E2_4097 at 4777.684 kb on - strand, within Pf6N2E2_4097 at 4777.684 kb on - strand, within Pf6N2E2_4097 at 4777.684 kb on - strand, within Pf6N2E2_4097 at 4777.684 kb on - strand, within Pf6N2E2_4097 at 4777.684 kb on - strand, within Pf6N2E2_4097 at 4777.684 kb on - strand, within Pf6N2E2_4097 at 4777.684 kb on - strand, within Pf6N2E2_4097 at 4777.684 kb on - strand, within Pf6N2E2_4097 at 4777.722 kb on + strand, within Pf6N2E2_4097 at 4777.722 kb on + strand, within Pf6N2E2_4097 at 4777.788 kb on + strand, within Pf6N2E2_4097 at 4777.788 kb on + strand, within Pf6N2E2_4097 at 4777.789 kb on - strand, within Pf6N2E2_4097 at 4777.789 kb on - strand, within Pf6N2E2_4097 at 4777.789 kb on - strand, within Pf6N2E2_4097 at 4777.878 kb on - strand, within Pf6N2E2_4097 at 4777.878 kb on - strand, within Pf6N2E2_4097 at 4777.890 kb on + strand, within Pf6N2E2_4097 at 4777.890 kb on + strand, within Pf6N2E2_4097 at 4777.890 kb on + strand, within Pf6N2E2_4097 at 4777.891 kb on - strand, within Pf6N2E2_4097 at 4778.087 kb on - strand at 4778.087 kb on - strand at 4778.097 kb on + strand at 4778.097 kb on + strand at 4778.098 kb on - strand at 4778.098 kb on - strand at 4778.098 kb on - strand at 4778.098 kb on - strand at 4778.102 kb on + strand at 4778.102 kb on + strand at 4778.102 kb on + strand at 4778.102 kb on + strand at 4778.102 kb on + strand at 4778.102 kb on + strand at 4778.102 kb on + strand at 4778.102 kb on + strand at 4778.102 kb on + strand at 4778.102 kb on + strand at 4778.102 kb on + strand at 4778.102 kb on + strand at 4778.103 kb on - strand at 4778.103 kb on - strand at 4778.103 kb on - strand at 4778.103 kb on - strand at 4778.103 kb on - strand at 4778.103 kb on - strand at 4778.103 kb on - strand at 4778.103 kb on - strand at 4778.103 kb on - strand at 4778.123 kb on + strand at 4778.123 kb on + strand at 4778.123 kb on + strand at 4778.123 kb on + strand at 4778.124 kb on - strand at 4778.130 kb on + strand at 4778.157 kb on + strand at 4778.218 kb on + strand at 4778.248 kb on + strand at 4778.249 kb on - strand at 4778.249 kb on - strand at 4778.282 kb on + strand at 4778.282 kb on + strand at 4778.282 kb on + strand at 4778.282 kb on + strand at 4778.282 kb on + strand at 4778.283 kb on - strand at 4778.283 kb on - strand at 4778.283 kb on - strand at 4778.283 kb on - strand at 4778.283 kb on - strand at 4778.283 kb on - strand at 4778.285 kb on - strand at 4778.304 kb on + strand at 4778.304 kb on + strand at 4778.304 kb on + strand at 4778.304 kb on + strand at 4778.304 kb on + strand at 4778.304 kb on + strand at 4778.305 kb on - strand at 4778.305 kb on - strand at 4778.305 kb on - strand at 4778.352 kb on + strand at 4778.352 kb on + strand at 4778.353 kb on - strand at 4778.353 kb on - strand at 4778.353 kb on - strand at 4778.366 kb on - strand at 4778.389 kb on + strand at 4778.448 kb on + strand at 4778.448 kb on + strand at 4778.448 kb on + strand at 4778.448 kb on + strand at 4778.448 kb on + strand at 4778.448 kb on + strand at 4778.449 kb on - strand at 4778.449 kb on - strand at 4778.449 kb on - strand at 4778.449 kb on - strand at 4778.449 kb on - strand at 4778.449 kb on - strand at 4778.449 kb on - strand at 4778.509 kb on + strand at 4778.509 kb on + strand at 4778.509 kb on + strand at 4778.510 kb on - strand at 4778.510 kb on - strand at 4778.510 kb on - strand at 4778.510 kb on - strand at 4778.704 kb on - strand, within Pf6N2E2_4098 at 4778.704 kb on - strand, within Pf6N2E2_4098 at 4778.762 kb on + strand, within Pf6N2E2_4098 at 4778.762 kb on + strand, within Pf6N2E2_4098 at 4778.762 kb on + strand, within Pf6N2E2_4098 at 4778.762 kb on + strand, within Pf6N2E2_4098 at 4778.762 kb on + strand, within Pf6N2E2_4098 at 4778.763 kb on - strand, within Pf6N2E2_4098 at 4778.763 kb on - strand, within Pf6N2E2_4098 at 4778.763 kb on - strand, within Pf6N2E2_4098 at 4778.763 kb on - strand, within Pf6N2E2_4098 at 4778.763 kb on - strand, within Pf6N2E2_4098 at 4778.763 kb on - strand, within Pf6N2E2_4098 at 4778.763 kb on - strand, within Pf6N2E2_4098 at 4778.763 kb on - strand, within Pf6N2E2_4098 at 4778.763 kb on - strand, within Pf6N2E2_4098 at 4778.763 kb on - strand, within Pf6N2E2_4098 at 4778.804 kb on + strand, within Pf6N2E2_4098 at 4778.822 kb on + strand, within Pf6N2E2_4098 at 4778.823 kb on - strand, within Pf6N2E2_4098 at 4778.823 kb on - strand, within Pf6N2E2_4098 at 4778.823 kb on - strand, within Pf6N2E2_4098 at 4778.823 kb on - strand, within Pf6N2E2_4098 at 4778.828 kb on + strand, within Pf6N2E2_4098 at 4778.828 kb on + strand, within Pf6N2E2_4098 at 4778.828 kb on + strand, within Pf6N2E2_4098 at 4778.829 kb on - strand, within Pf6N2E2_4098 at 4778.829 kb on - strand, within Pf6N2E2_4098 at 4778.912 kb on + strand, within Pf6N2E2_4098 at 4778.912 kb on + strand, within Pf6N2E2_4098 at 4778.912 kb on + strand, within Pf6N2E2_4098 at 4778.912 kb on + strand, within Pf6N2E2_4098 at 4778.912 kb on + strand, within Pf6N2E2_4098 at 4778.913 kb on - strand, within Pf6N2E2_4098 at 4778.913 kb on - strand, within Pf6N2E2_4098 at 4778.913 kb on - strand, within Pf6N2E2_4098
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 4,776,511 + Pf6N2E2_4096 0.52 +0.9 4,776,511 + Pf6N2E2_4096 0.52 +0.3 4,776,511 + Pf6N2E2_4096 0.52 +0.1 4,776,512 - Pf6N2E2_4096 0.52 +0.2 4,776,512 - Pf6N2E2_4096 0.52 +1.1 4,776,512 - Pf6N2E2_4096 0.52 -0.6 4,776,562 + Pf6N2E2_4096 0.55 -0.0 4,776,563 - Pf6N2E2_4096 0.55 +0.1 4,776,563 - Pf6N2E2_4096 0.55 -0.3 4,776,649 + Pf6N2E2_4096 0.61 +0.2 4,776,761 + Pf6N2E2_4096 0.68 -0.3 4,776,761 + Pf6N2E2_4096 0.68 -0.2 4,776,761 + Pf6N2E2_4096 0.68 +0.6 4,776,762 - Pf6N2E2_4096 0.68 +0.6 4,776,762 - Pf6N2E2_4096 0.68 +0.7 4,777,047 + Pf6N2E2_4096 0.87 -1.4 4,777,047 + Pf6N2E2_4096 0.87 +1.0 4,777,048 - Pf6N2E2_4096 0.87 +0.1 4,777,048 - Pf6N2E2_4096 0.87 -0.2 4,777,091 + -0.8 4,777,091 + +1.1 4,777,091 + +0.0 4,777,091 + -0.4 4,777,092 - +1.1 4,777,092 - +1.2 4,777,092 - -0.2 4,777,092 - -0.7 4,777,092 - -0.3 4,777,388 - +0.8 4,777,388 - +1.0 4,777,496 - Pf6N2E2_4097 0.14 +0.8 4,777,520 + Pf6N2E2_4097 0.18 +2.8 4,777,521 - Pf6N2E2_4097 0.18 +1.1 4,777,681 + Pf6N2E2_4097 0.42 +2.2 4,777,681 + Pf6N2E2_4097 0.42 +1.4 4,777,681 + Pf6N2E2_4097 0.42 +1.9 4,777,681 + Pf6N2E2_4097 0.42 +2.5 4,777,681 + Pf6N2E2_4097 0.42 +0.7 4,777,681 + Pf6N2E2_4097 0.42 +1.7 4,777,681 + Pf6N2E2_4097 0.42 +1.9 4,777,681 + Pf6N2E2_4097 0.42 +2.2 4,777,682 - Pf6N2E2_4097 0.42 +2.2 4,777,682 - Pf6N2E2_4097 0.42 +2.9 4,777,682 - Pf6N2E2_4097 0.42 +1.7 4,777,683 + Pf6N2E2_4097 0.43 +1.5 4,777,683 + Pf6N2E2_4097 0.43 +2.0 4,777,683 + Pf6N2E2_4097 0.43 +2.9 4,777,683 + Pf6N2E2_4097 0.43 +1.4 4,777,683 + Pf6N2E2_4097 0.43 +0.9 4,777,683 + Pf6N2E2_4097 0.43 +2.4 4,777,683 + Pf6N2E2_4097 0.43 +2.4 4,777,684 - Pf6N2E2_4097 0.43 +1.8 4,777,684 - Pf6N2E2_4097 0.43 +1.5 4,777,684 - Pf6N2E2_4097 0.43 +1.6 4,777,684 - Pf6N2E2_4097 0.43 +3.0 4,777,684 - Pf6N2E2_4097 0.43 +1.9 4,777,684 - Pf6N2E2_4097 0.43 +1.9 4,777,684 - Pf6N2E2_4097 0.43 +1.9 4,777,684 - Pf6N2E2_4097 0.43 +1.8 4,777,684 - Pf6N2E2_4097 0.43 +1.6 4,777,722 + Pf6N2E2_4097 0.49 +1.5 4,777,722 + Pf6N2E2_4097 0.49 +1.2 4,777,788 + Pf6N2E2_4097 0.59 +2.2 4,777,788 + Pf6N2E2_4097 0.59 +2.4 4,777,789 - Pf6N2E2_4097 0.59 +2.2 4,777,789 - Pf6N2E2_4097 0.59 +2.5 4,777,789 - Pf6N2E2_4097 0.59 +2.4 4,777,878 - Pf6N2E2_4097 0.73 +1.0 4,777,878 - Pf6N2E2_4097 0.73 +2.7 4,777,890 + Pf6N2E2_4097 0.74 +1.7 4,777,890 + Pf6N2E2_4097 0.74 +2.0 4,777,890 + Pf6N2E2_4097 0.74 +2.1 4,777,891 - Pf6N2E2_4097 0.75 +2.0 4,778,087 - -2.1 4,778,087 - -2.4 4,778,097 + +3.0 4,778,097 + +0.2 4,778,098 - +0.2 4,778,098 - +1.0 4,778,098 - -2.4 4,778,098 - -0.7 4,778,102 + +1.4 4,778,102 + +2.6 4,778,102 + +1.8 4,778,102 + +1.6 4,778,102 + +1.7 4,778,102 + +1.7 4,778,102 + +0.7 4,778,102 + +2.8 4,778,102 + +2.1 4,778,102 + +2.4 4,778,102 + +1.8 4,778,102 + +2.7 4,778,103 - -1.8 4,778,103 - -0.3 4,778,103 - -1.1 4,778,103 - +0.2 4,778,103 - -1.3 4,778,103 - +1.5 4,778,103 - -1.2 4,778,103 - +0.2 4,778,103 - -0.7 4,778,123 + +1.7 4,778,123 + +0.6 4,778,123 + +1.3 4,778,123 + +1.7 4,778,124 - -0.9 4,778,130 + +3.1 4,778,157 + +2.1 4,778,218 + +0.7 4,778,248 + +0.8 4,778,249 - +0.7 4,778,249 - +0.6 4,778,282 + +0.7 4,778,282 + +1.1 4,778,282 + +2.8 4,778,282 + +0.7 4,778,282 + +1.3 4,778,283 - -0.3 4,778,283 - -0.8 4,778,283 - -1.6 4,778,283 - -0.1 4,778,283 - -1.4 4,778,283 - -0.2 4,778,285 - -0.6 4,778,304 + +0.7 4,778,304 + +1.6 4,778,304 + +1.7 4,778,304 + -0.1 4,778,304 + +1.6 4,778,304 + +1.9 4,778,305 - -1.5 4,778,305 - -1.5 4,778,305 - -0.6 4,778,352 + +0.9 4,778,352 + +0.8 4,778,353 - -0.3 4,778,353 - +0.1 4,778,353 - -1.6 4,778,366 - -0.8 4,778,389 + -0.3 4,778,448 + +0.9 4,778,448 + +1.3 4,778,448 + +0.3 4,778,448 + +0.6 4,778,448 + +0.6 4,778,448 + +1.1 4,778,449 - -1.1 4,778,449 - +0.4 4,778,449 - -1.5 4,778,449 - +0.1 4,778,449 - -0.7 4,778,449 - -1.0 4,778,449 - -0.3 4,778,509 + -0.4 4,778,509 + +1.0 4,778,509 + +0.7 4,778,510 - -0.3 4,778,510 - -1.9 4,778,510 - -0.3 4,778,510 - -0.3 4,778,704 - Pf6N2E2_4098 0.22 -1.4 4,778,704 - Pf6N2E2_4098 0.22 -0.7 4,778,762 + Pf6N2E2_4098 0.27 +0.6 4,778,762 + Pf6N2E2_4098 0.27 -0.3 4,778,762 + Pf6N2E2_4098 0.27 +1.0 4,778,762 + Pf6N2E2_4098 0.27 +0.5 4,778,762 + Pf6N2E2_4098 0.27 +0.3 4,778,763 - Pf6N2E2_4098 0.27 -0.1 4,778,763 - Pf6N2E2_4098 0.27 -1.9 4,778,763 - Pf6N2E2_4098 0.27 -0.9 4,778,763 - Pf6N2E2_4098 0.27 -0.3 4,778,763 - Pf6N2E2_4098 0.27 -1.1 4,778,763 - Pf6N2E2_4098 0.27 +0.2 4,778,763 - Pf6N2E2_4098 0.27 -2.1 4,778,763 - Pf6N2E2_4098 0.27 -0.8 4,778,763 - Pf6N2E2_4098 0.27 -0.8 4,778,763 - Pf6N2E2_4098 0.27 -0.4 4,778,804 + Pf6N2E2_4098 0.31 -0.2 4,778,822 + Pf6N2E2_4098 0.33 -0.7 4,778,823 - Pf6N2E2_4098 0.33 +0.3 4,778,823 - Pf6N2E2_4098 0.33 -0.0 4,778,823 - Pf6N2E2_4098 0.33 -0.5 4,778,823 - Pf6N2E2_4098 0.33 -1.6 4,778,828 + Pf6N2E2_4098 0.33 -0.3 4,778,828 + Pf6N2E2_4098 0.33 +1.2 4,778,828 + Pf6N2E2_4098 0.33 -0.2 4,778,829 - Pf6N2E2_4098 0.33 -0.1 4,778,829 - Pf6N2E2_4098 0.33 +0.3 4,778,912 + Pf6N2E2_4098 0.41 -0.5 4,778,912 + Pf6N2E2_4098 0.41 -0.2 4,778,912 + Pf6N2E2_4098 0.41 +0.5 4,778,912 + Pf6N2E2_4098 0.41 +0.3 4,778,912 + Pf6N2E2_4098 0.41 -0.5 4,778,913 - Pf6N2E2_4098 0.41 -0.8 4,778,913 - Pf6N2E2_4098 0.41 -0.8 4,778,913 - Pf6N2E2_4098 0.41 +0.4
Or see this region's nucleotide sequence