Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4097

Experiment: D-Galactose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Galactose (C)
4,776,511	+		Pf6N2E2_4096	0.52	+0.9
4,776,511	+		Pf6N2E2_4096	0.52	+0.3
4,776,511	+		Pf6N2E2_4096	0.52	+0.1
4,776,512	-		Pf6N2E2_4096	0.52	+0.2
4,776,512	-		Pf6N2E2_4096	0.52	+1.1
4,776,512	-		Pf6N2E2_4096	0.52	-0.6
4,776,562	+		Pf6N2E2_4096	0.55	-0.0
4,776,563	-		Pf6N2E2_4096	0.55	+0.1
4,776,563	-		Pf6N2E2_4096	0.55	-0.3
4,776,649	+		Pf6N2E2_4096	0.61	+0.2
4,776,761	+		Pf6N2E2_4096	0.68	-0.3
4,776,761	+		Pf6N2E2_4096	0.68	-0.2
4,776,761	+		Pf6N2E2_4096	0.68	+0.6
4,776,762	-		Pf6N2E2_4096	0.68	+0.6
4,776,762	-		Pf6N2E2_4096	0.68	+0.7
4,777,047	+		Pf6N2E2_4096	0.87	-1.4
4,777,047	+		Pf6N2E2_4096	0.87	+1.0
4,777,048	-		Pf6N2E2_4096	0.87	+0.1
4,777,048	-		Pf6N2E2_4096	0.87	-0.2
4,777,091	+				-0.8
4,777,091	+				+1.1
4,777,091	+				+0.0
4,777,091	+				-0.4
4,777,092	-				+1.1
4,777,092	-				+1.2
4,777,092	-				-0.2
4,777,092	-				-0.7
4,777,092	-				-0.3
4,777,388	-				+0.8
4,777,388	-				+1.0
4,777,496	-		Pf6N2E2_4097	0.14	+0.8
4,777,520	+		Pf6N2E2_4097	0.18	+2.8
4,777,521	-		Pf6N2E2_4097	0.18	+1.1
4,777,681	+		Pf6N2E2_4097	0.42	+2.2
4,777,681	+		Pf6N2E2_4097	0.42	+1.4
4,777,681	+		Pf6N2E2_4097	0.42	+1.9
4,777,681	+		Pf6N2E2_4097	0.42	+2.5
4,777,681	+		Pf6N2E2_4097	0.42	+0.7
4,777,681	+		Pf6N2E2_4097	0.42	+1.7
4,777,681	+		Pf6N2E2_4097	0.42	+1.9
4,777,681	+		Pf6N2E2_4097	0.42	+2.2
4,777,682	-		Pf6N2E2_4097	0.42	+2.2
4,777,682	-		Pf6N2E2_4097	0.42	+2.9
4,777,682	-		Pf6N2E2_4097	0.42	+1.7
4,777,683	+		Pf6N2E2_4097	0.43	+1.5
4,777,683	+		Pf6N2E2_4097	0.43	+2.0
4,777,683	+		Pf6N2E2_4097	0.43	+2.9
4,777,683	+		Pf6N2E2_4097	0.43	+1.4
4,777,683	+		Pf6N2E2_4097	0.43	+0.9
4,777,683	+		Pf6N2E2_4097	0.43	+2.4
4,777,683	+		Pf6N2E2_4097	0.43	+2.4
4,777,684	-		Pf6N2E2_4097	0.43	+1.8
4,777,684	-		Pf6N2E2_4097	0.43	+1.5
4,777,684	-		Pf6N2E2_4097	0.43	+1.6
4,777,684	-		Pf6N2E2_4097	0.43	+3.0
4,777,684	-		Pf6N2E2_4097	0.43	+1.9
4,777,684	-		Pf6N2E2_4097	0.43	+1.9
4,777,684	-		Pf6N2E2_4097	0.43	+1.9
4,777,684	-		Pf6N2E2_4097	0.43	+1.8
4,777,684	-		Pf6N2E2_4097	0.43	+1.6
4,777,722	+		Pf6N2E2_4097	0.49	+1.5
4,777,722	+		Pf6N2E2_4097	0.49	+1.2
4,777,788	+		Pf6N2E2_4097	0.59	+2.2
4,777,788	+		Pf6N2E2_4097	0.59	+2.4
4,777,789	-		Pf6N2E2_4097	0.59	+2.2
4,777,789	-		Pf6N2E2_4097	0.59	+2.5
4,777,789	-		Pf6N2E2_4097	0.59	+2.4
4,777,878	-		Pf6N2E2_4097	0.73	+1.0
4,777,878	-		Pf6N2E2_4097	0.73	+2.7
4,777,890	+		Pf6N2E2_4097	0.74	+1.7
4,777,890	+		Pf6N2E2_4097	0.74	+2.0
4,777,890	+		Pf6N2E2_4097	0.74	+2.1
4,777,891	-		Pf6N2E2_4097	0.75	+2.0
4,778,087	-				-2.1
4,778,087	-				-2.4
4,778,097	+				+3.0
4,778,097	+				+0.2
4,778,098	-				+0.2
4,778,098	-				+1.0
4,778,098	-				-2.4
4,778,098	-				-0.7
4,778,102	+				+1.4
4,778,102	+				+2.6
4,778,102	+				+1.8
4,778,102	+				+1.6
4,778,102	+				+1.7
4,778,102	+				+1.7
4,778,102	+				+0.7
4,778,102	+				+2.8
4,778,102	+				+2.1
4,778,102	+				+2.4
4,778,102	+				+1.8
4,778,102	+				+2.7
4,778,103	-				-1.8
4,778,103	-				-0.3
4,778,103	-				-1.1
4,778,103	-				+0.2
4,778,103	-				-1.3
4,778,103	-				+1.5
4,778,103	-				-1.2
4,778,103	-				+0.2
4,778,103	-				-0.7
4,778,123	+				+1.7
4,778,123	+				+0.6
4,778,123	+				+1.3
4,778,123	+				+1.7
4,778,124	-				-0.9
4,778,130	+				+3.1
4,778,157	+				+2.1
4,778,218	+				+0.7
4,778,248	+				+0.8
4,778,249	-				+0.7
4,778,249	-				+0.6
4,778,282	+				+0.7
4,778,282	+				+1.1
4,778,282	+				+2.8
4,778,282	+				+0.7
4,778,282	+				+1.3
4,778,283	-				-0.3
4,778,283	-				-0.8
4,778,283	-				-1.6
4,778,283	-				-0.1
4,778,283	-				-1.4
4,778,283	-				-0.2
4,778,285	-				-0.6
4,778,304	+				+0.7
4,778,304	+				+1.6
4,778,304	+				+1.7
4,778,304	+				-0.1
4,778,304	+				+1.6
4,778,304	+				+1.9
4,778,305	-				-1.5
4,778,305	-				-1.5
4,778,305	-				-0.6
4,778,352	+				+0.9
4,778,352	+				+0.8
4,778,353	-				-0.3
4,778,353	-				+0.1
4,778,353	-				-1.6
4,778,366	-				-0.8
4,778,389	+				-0.3
4,778,448	+				+0.9
4,778,448	+				+1.3
4,778,448	+				+0.3
4,778,448	+				+0.6
4,778,448	+				+0.6
4,778,448	+				+1.1
4,778,449	-				-1.1
4,778,449	-				+0.4
4,778,449	-				-1.5
4,778,449	-				+0.1
4,778,449	-				-0.7
4,778,449	-				-1.0
4,778,449	-				-0.3
4,778,509	+				-0.4
4,778,509	+				+1.0
4,778,509	+				+0.7
4,778,510	-				-0.3
4,778,510	-				-1.9
4,778,510	-				-0.3
4,778,510	-				-0.3
4,778,704	-		Pf6N2E2_4098	0.22	-1.4
4,778,704	-		Pf6N2E2_4098	0.22	-0.7
4,778,762	+		Pf6N2E2_4098	0.27	+0.6
4,778,762	+		Pf6N2E2_4098	0.27	-0.3
4,778,762	+		Pf6N2E2_4098	0.27	+1.0
4,778,762	+		Pf6N2E2_4098	0.27	+0.5
4,778,762	+		Pf6N2E2_4098	0.27	+0.3
4,778,763	-		Pf6N2E2_4098	0.27	-0.1
4,778,763	-		Pf6N2E2_4098	0.27	-1.9
4,778,763	-		Pf6N2E2_4098	0.27	-0.9
4,778,763	-		Pf6N2E2_4098	0.27	-0.3
4,778,763	-		Pf6N2E2_4098	0.27	-1.1
4,778,763	-		Pf6N2E2_4098	0.27	+0.2
4,778,763	-		Pf6N2E2_4098	0.27	-2.1
4,778,763	-		Pf6N2E2_4098	0.27	-0.8
4,778,763	-		Pf6N2E2_4098	0.27	-0.8
4,778,763	-		Pf6N2E2_4098	0.27	-0.4
4,778,804	+		Pf6N2E2_4098	0.31	-0.2
4,778,822	+		Pf6N2E2_4098	0.33	-0.7
4,778,823	-		Pf6N2E2_4098	0.33	+0.3
4,778,823	-		Pf6N2E2_4098	0.33	-0.0
4,778,823	-		Pf6N2E2_4098	0.33	-0.5
4,778,823	-		Pf6N2E2_4098	0.33	-1.6
4,778,828	+		Pf6N2E2_4098	0.33	-0.3
4,778,828	+		Pf6N2E2_4098	0.33	+1.2
4,778,828	+		Pf6N2E2_4098	0.33	-0.2
4,778,829	-		Pf6N2E2_4098	0.33	-0.1
4,778,829	-		Pf6N2E2_4098	0.33	+0.3
4,778,912	+		Pf6N2E2_4098	0.41	-0.5
4,778,912	+		Pf6N2E2_4098	0.41	-0.2
4,778,912	+		Pf6N2E2_4098	0.41	+0.5
4,778,912	+		Pf6N2E2_4098	0.41	+0.3
4,778,912	+		Pf6N2E2_4098	0.41	-0.5
4,778,913	-		Pf6N2E2_4098	0.41	-0.8
4,778,913	-		Pf6N2E2_4098	0.41	-0.8
4,778,913	-		Pf6N2E2_4098	0.41	+0.4