Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_324 and Pf6N2E2_325 are separated by 44 nucleotides Pf6N2E2_325 and Pf6N2E2_326 are separated by 33 nucleotides
Pf6N2E2_324 - Inosose isomerase (EC 5.3.99.-), at 392,759 to 393,850
_324
Pf6N2E2_325 - hypothetical protein, at 393,895 to 394,008
_325
Pf6N2E2_326 - Putative nucleoside transporter YegT, at 394,042 to 395,274
_326
Position (kb) 393
394
395 Strain fitness (log2 ratio) -1
0
1
2 at 392.921 kb on + strand, within Pf6N2E2_324 at 392.922 kb on - strand, within Pf6N2E2_324 at 392.922 kb on - strand, within Pf6N2E2_324 at 392.922 kb on - strand, within Pf6N2E2_324 at 392.922 kb on - strand, within Pf6N2E2_324 at 392.922 kb on - strand, within Pf6N2E2_324 at 392.957 kb on + strand, within Pf6N2E2_324 at 392.958 kb on - strand, within Pf6N2E2_324 at 393.215 kb on + strand, within Pf6N2E2_324 at 393.215 kb on + strand, within Pf6N2E2_324 at 393.216 kb on - strand, within Pf6N2E2_324 at 393.332 kb on + strand, within Pf6N2E2_324 at 393.332 kb on + strand, within Pf6N2E2_324 at 393.425 kb on + strand, within Pf6N2E2_324 at 393.425 kb on + strand, within Pf6N2E2_324 at 393.426 kb on - strand, within Pf6N2E2_324 at 393.461 kb on + strand, within Pf6N2E2_324 at 393.461 kb on + strand, within Pf6N2E2_324 at 393.462 kb on - strand, within Pf6N2E2_324 at 393.462 kb on - strand, within Pf6N2E2_324 at 393.462 kb on - strand, within Pf6N2E2_324 at 393.848 kb on + strand at 393.849 kb on - strand at 393.849 kb on - strand at 393.849 kb on - strand at 393.869 kb on + strand at 393.897 kb on - strand at 394.027 kb on - strand at 394.027 kb on - strand at 394.027 kb on - strand at 394.092 kb on + strand at 394.336 kb on + strand, within Pf6N2E2_326 at 394.336 kb on + strand, within Pf6N2E2_326 at 394.337 kb on - strand, within Pf6N2E2_326 at 394.337 kb on - strand, within Pf6N2E2_326 at 394.348 kb on + strand, within Pf6N2E2_326 at 394.348 kb on + strand, within Pf6N2E2_326 at 394.348 kb on + strand, within Pf6N2E2_326 at 394.348 kb on + strand, within Pf6N2E2_326 at 394.348 kb on + strand, within Pf6N2E2_326 at 394.349 kb on - strand, within Pf6N2E2_326 at 394.349 kb on - strand, within Pf6N2E2_326 at 394.349 kb on - strand, within Pf6N2E2_326 at 394.349 kb on - strand, within Pf6N2E2_326 at 394.360 kb on + strand, within Pf6N2E2_326 at 394.360 kb on + strand, within Pf6N2E2_326 at 394.360 kb on + strand, within Pf6N2E2_326 at 394.361 kb on - strand, within Pf6N2E2_326 at 394.539 kb on + strand, within Pf6N2E2_326 at 394.540 kb on - strand, within Pf6N2E2_326 at 394.582 kb on + strand, within Pf6N2E2_326 at 394.582 kb on + strand, within Pf6N2E2_326 at 394.583 kb on - strand, within Pf6N2E2_326 at 394.583 kb on - strand, within Pf6N2E2_326 at 394.690 kb on + strand, within Pf6N2E2_326 at 394.690 kb on + strand, within Pf6N2E2_326 at 394.742 kb on - strand, within Pf6N2E2_326 at 394.742 kb on - strand, within Pf6N2E2_326 at 394.742 kb on - strand, within Pf6N2E2_326 at 394.742 kb on - strand, within Pf6N2E2_326 at 394.742 kb on - strand, within Pf6N2E2_326 at 394.742 kb on - strand, within Pf6N2E2_326 at 394.742 kb on - strand, within Pf6N2E2_326 at 394.744 kb on + strand, within Pf6N2E2_326 at 394.916 kb on - strand, within Pf6N2E2_326 at 394.993 kb on + strand, within Pf6N2E2_326 at 394.994 kb on - strand, within Pf6N2E2_326
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 392,921 + Pf6N2E2_324 0.15 -0.7 392,922 - Pf6N2E2_324 0.15 -1.6 392,922 - Pf6N2E2_324 0.15 -0.6 392,922 - Pf6N2E2_324 0.15 +0.5 392,922 - Pf6N2E2_324 0.15 +0.1 392,922 - Pf6N2E2_324 0.15 +1.3 392,957 + Pf6N2E2_324 0.18 +0.1 392,958 - Pf6N2E2_324 0.18 +0.4 393,215 + Pf6N2E2_324 0.42 +0.2 393,215 + Pf6N2E2_324 0.42 +1.9 393,216 - Pf6N2E2_324 0.42 +0.1 393,332 + Pf6N2E2_324 0.52 -0.0 393,332 + Pf6N2E2_324 0.52 +0.4 393,425 + Pf6N2E2_324 0.61 +2.2 393,425 + Pf6N2E2_324 0.61 +1.3 393,426 - Pf6N2E2_324 0.61 -0.1 393,461 + Pf6N2E2_324 0.64 +0.2 393,461 + Pf6N2E2_324 0.64 +1.2 393,462 - Pf6N2E2_324 0.64 +0.1 393,462 - Pf6N2E2_324 0.64 -1.4 393,462 - Pf6N2E2_324 0.64 +0.8 393,848 + +0.2 393,849 - +0.1 393,849 - +1.2 393,849 - +1.6 393,869 + +0.7 393,897 - -0.4 394,027 - +1.1 394,027 - +0.4 394,027 - +0.4 394,092 + +0.0 394,336 + Pf6N2E2_326 0.24 -0.4 394,336 + Pf6N2E2_326 0.24 -1.4 394,337 - Pf6N2E2_326 0.24 -0.2 394,337 - Pf6N2E2_326 0.24 -0.7 394,348 + Pf6N2E2_326 0.25 -0.9 394,348 + Pf6N2E2_326 0.25 +0.2 394,348 + Pf6N2E2_326 0.25 +0.8 394,348 + Pf6N2E2_326 0.25 +1.6 394,348 + Pf6N2E2_326 0.25 +0.3 394,349 - Pf6N2E2_326 0.25 +0.5 394,349 - Pf6N2E2_326 0.25 +0.2 394,349 - Pf6N2E2_326 0.25 +1.2 394,349 - Pf6N2E2_326 0.25 -0.4 394,360 + Pf6N2E2_326 0.26 -1.1 394,360 + Pf6N2E2_326 0.26 -1.7 394,360 + Pf6N2E2_326 0.26 -1.2 394,361 - Pf6N2E2_326 0.26 -0.4 394,539 + Pf6N2E2_326 0.40 -1.6 394,540 - Pf6N2E2_326 0.40 +0.3 394,582 + Pf6N2E2_326 0.44 -1.1 394,582 + Pf6N2E2_326 0.44 -0.4 394,583 - Pf6N2E2_326 0.44 +0.7 394,583 - Pf6N2E2_326 0.44 +0.9 394,690 + Pf6N2E2_326 0.53 -0.5 394,690 + Pf6N2E2_326 0.53 +0.3 394,742 - Pf6N2E2_326 0.57 -1.6 394,742 - Pf6N2E2_326 0.57 +0.4 394,742 - Pf6N2E2_326 0.57 -0.6 394,742 - Pf6N2E2_326 0.57 +0.8 394,742 - Pf6N2E2_326 0.57 -1.6 394,742 - Pf6N2E2_326 0.57 -0.3 394,742 - Pf6N2E2_326 0.57 +0.5 394,744 + Pf6N2E2_326 0.57 +0.0 394,916 - Pf6N2E2_326 0.71 -0.7 394,993 + Pf6N2E2_326 0.77 -0.4 394,994 - Pf6N2E2_326 0.77 +1.4
Or see this region's nucleotide sequence