Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_58 and Pf1N1B4_59 are separated by 244 nucleotides Pf1N1B4_59 and Pf1N1B4_60 overlap by 1 nucleotides Pf1N1B4_60 and Pf1N1B4_61 are separated by 276 nucleotides Pf1N1B4_61 and Pf1N1B4_62 are separated by 71 nucleotides
Pf1N1B4_58 - Transaldolase (EC 2.2.1.2), at 62,365 to 63,291
_58
Pf1N1B4_59 - Serine-protein kinase RsbW (EC 2.7.11.1), at 63,536 to 64,018
_59
Pf1N1B4_60 - Serine phosphatase RsbU, regulator of sigma subunit, at 64,018 to 65,199
_60
Pf1N1B4_61 - FIG00953170: hypothetical protein, at 65,476 to 65,775
_61
Pf1N1B4_62 - VacJ-like lipoprotein precursor, at 65,847 to 66,536
_62
Position (kb)
64
65
66 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 63.294 kb on + strand at 63.367 kb on + strand at 63.367 kb on + strand at 63.440 kb on + strand at 63.440 kb on + strand at 63.441 kb on - strand at 63.445 kb on + strand at 63.445 kb on + strand at 65.279 kb on - strand at 65.315 kb on - strand at 65.319 kb on - strand at 65.319 kb on - strand at 65.319 kb on - strand at 65.319 kb on - strand at 65.319 kb on - strand at 65.319 kb on - strand at 65.319 kb on - strand at 65.319 kb on - strand at 65.325 kb on - strand at 65.344 kb on - strand at 65.344 kb on - strand at 65.410 kb on + strand at 65.410 kb on + strand at 65.410 kb on + strand at 65.410 kb on + strand at 65.410 kb on + strand at 65.410 kb on + strand at 65.410 kb on + strand at 65.410 kb on + strand at 65.410 kb on + strand at 65.410 kb on + strand at 65.410 kb on + strand at 65.410 kb on + strand at 65.434 kb on + strand at 65.434 kb on + strand at 65.434 kb on + strand at 65.497 kb on + strand at 65.498 kb on - strand at 65.754 kb on + strand at 65.755 kb on - strand at 65.755 kb on - strand at 65.755 kb on - strand at 65.755 kb on - strand at 65.755 kb on - strand at 65.773 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 63,294 + +0.2 63,367 + +0.7 63,367 + -0.8 63,440 + -1.1 63,440 + +0.3 63,441 - -0.3 63,445 + -0.4 63,445 + +0.0 65,279 - -0.4 65,315 - -1.6 65,319 - +1.2 65,319 - -0.8 65,319 - +0.2 65,319 - -1.4 65,319 - -1.1 65,319 - -0.6 65,319 - -1.4 65,319 - -3.1 65,325 - -1.0 65,344 - -1.1 65,344 - -1.3 65,410 + -0.7 65,410 + -0.4 65,410 + -0.4 65,410 + +0.6 65,410 + -0.9 65,410 + -1.1 65,410 + +0.0 65,410 + -0.0 65,410 + +1.2 65,410 + +0.2 65,410 + -0.8 65,410 + -0.1 65,434 + -0.1 65,434 + -0.8 65,434 + -0.8 65,497 + +0.8 65,498 - -0.1 65,754 + -1.1 65,755 - -0.7 65,755 - -2.0 65,755 - +0.6 65,755 - -0.2 65,755 - +0.2 65,773 + +1.2
Or see this region's nucleotide sequence