Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_4665 and Pf1N1B4_4666 overlap by 4 nucleotides Pf1N1B4_4666 and Pf1N1B4_4667 overlap by 22 nucleotides
Pf1N1B4_4665 - Acriflavin resistance plasma membrane protein, at 5,141,918 to 5,145,022
_4665
Pf1N1B4_4666 - Acriflavin resistance plasma membrane protein, at 5,145,019 to 5,146,605
_4666
Pf1N1B4_4667 - Acriflavin resistance plasma membrane protein, at 5,146,584 to 5,148,125
_4667
Position (kb)
5145
5146
5147 Strain fitness (log2 ratio)
-2
-1
0
1 at 5144.049 kb on - strand, within Pf1N1B4_4665 at 5144.049 kb on - strand at 5144.049 kb on - strand, within Pf1N1B4_4665 at 5144.118 kb on - strand at 5144.153 kb on + strand, within Pf1N1B4_4665 at 5144.154 kb on - strand at 5144.154 kb on - strand, within Pf1N1B4_4665 at 5144.154 kb on - strand, within Pf1N1B4_4665 at 5144.525 kb on + strand, within Pf1N1B4_4665 at 5144.525 kb on + strand, within Pf1N1B4_4665 at 5144.525 kb on + strand, within Pf1N1B4_4665 at 5144.526 kb on - strand, within Pf1N1B4_4665 at 5144.526 kb on - strand, within Pf1N1B4_4665 at 5144.526 kb on - strand, within Pf1N1B4_4665 at 5144.526 kb on - strand, within Pf1N1B4_4665 at 5144.526 kb on - strand, within Pf1N1B4_4665 at 5144.555 kb on + strand, within Pf1N1B4_4665 at 5144.556 kb on - strand, within Pf1N1B4_4665 at 5144.765 kb on + strand at 5144.945 kb on - strand at 5144.948 kb on + strand at 5144.949 kb on - strand at 5144.949 kb on - strand at 5145.403 kb on + strand, within Pf1N1B4_4666 at 5145.403 kb on + strand, within Pf1N1B4_4666 at 5145.629 kb on + strand, within Pf1N1B4_4666 at 5145.630 kb on - strand, within Pf1N1B4_4666 at 5145.739 kb on + strand, within Pf1N1B4_4666 at 5145.826 kb on + strand, within Pf1N1B4_4666 at 5146.150 kb on + strand, within Pf1N1B4_4666 at 5146.151 kb on - strand, within Pf1N1B4_4666 at 5146.563 kb on + strand at 5146.563 kb on + strand at 5146.564 kb on - strand at 5146.589 kb on - strand at 5147.010 kb on + strand, within Pf1N1B4_4667 at 5147.016 kb on + strand at 5147.016 kb on + strand at 5147.248 kb on - strand, within Pf1N1B4_4667
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 5,144,049 - Pf1N1B4_4665 0.69 -0.1 5,144,049 - -0.1 5,144,049 - Pf1N1B4_4665 0.69 +0.3 5,144,118 - +0.5 5,144,153 + Pf1N1B4_4665 0.72 -0.6 5,144,154 - +0.9 5,144,154 - Pf1N1B4_4665 0.72 +0.5 5,144,154 - Pf1N1B4_4665 0.72 +0.7 5,144,525 + Pf1N1B4_4665 0.84 +0.4 5,144,525 + Pf1N1B4_4665 0.84 +0.7 5,144,525 + Pf1N1B4_4665 0.84 -0.5 5,144,526 - Pf1N1B4_4665 0.84 +0.3 5,144,526 - Pf1N1B4_4665 0.84 +0.9 5,144,526 - Pf1N1B4_4665 0.84 -1.9 5,144,526 - Pf1N1B4_4665 0.84 -0.1 5,144,526 - Pf1N1B4_4665 0.84 +1.2 5,144,555 + Pf1N1B4_4665 0.85 +0.2 5,144,556 - Pf1N1B4_4665 0.85 -0.5 5,144,765 + -0.2 5,144,945 - -0.1 5,144,948 + +1.3 5,144,949 - -0.7 5,144,949 - -0.8 5,145,403 + Pf1N1B4_4666 0.24 -0.5 5,145,403 + Pf1N1B4_4666 0.24 +0.7 5,145,629 + Pf1N1B4_4666 0.38 -1.5 5,145,630 - Pf1N1B4_4666 0.39 -2.4 5,145,739 + Pf1N1B4_4666 0.45 +0.9 5,145,826 + Pf1N1B4_4666 0.51 -1.1 5,146,150 + Pf1N1B4_4666 0.71 -1.1 5,146,151 - Pf1N1B4_4666 0.71 -0.9 5,146,563 + -0.3 5,146,563 + -0.7 5,146,564 - -1.7 5,146,589 - +0.2 5,147,010 + Pf1N1B4_4667 0.28 -1.4 5,147,016 + +0.9 5,147,016 + +0.9 5,147,248 - Pf1N1B4_4667 0.43 -0.2
Or see this region's nucleotide sequence