Experiment: L-Rhamnose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS01600 and HSERO_RS01605 are separated by 85 nucleotides HSERO_RS01605 and HSERO_RS01610 are separated by 586 nucleotides
HSERO_RS01600: HSERO_RS01600 - 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase, at 354,784 to 355,536
_RS01600
HSERO_RS01605: HSERO_RS01605 - amino acid dehydrogenase, at 355,622 to 356,887
_RS01605
HSERO_RS01610: HSERO_RS01610 - enoyl-CoA hydratase, at 357,474 to 358,634
_RS01610
Position (kb) 355
356
357 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 354.755 kb on + strand at 354.857 kb on - strand at 355.108 kb on - strand at 355.111 kb on + strand, within HSERO_RS01600 at 355.124 kb on + strand, within HSERO_RS01600 at 355.178 kb on + strand, within HSERO_RS01600 at 355.497 kb on - strand at 355.552 kb on + strand at 355.557 kb on + strand at 355.859 kb on + strand, within HSERO_RS01605 at 356.070 kb on + strand, within HSERO_RS01605 at 356.384 kb on + strand, within HSERO_RS01605 at 356.451 kb on - strand, within HSERO_RS01605 at 356.504 kb on - strand, within HSERO_RS01605 at 356.514 kb on - strand, within HSERO_RS01605 at 356.525 kb on - strand, within HSERO_RS01605 at 356.742 kb on - strand, within HSERO_RS01605 at 356.765 kb on - strand at 356.914 kb on - strand at 357.042 kb on + strand at 357.403 kb on - strand at 357.419 kb on + strand at 357.479 kb on - strand at 357.546 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Rhamnose (C) remove 354,755 + +1.9 354,857 - +0.7 355,108 - +1.9 355,111 + HSERO_RS01600 0.43 +0.4 355,124 + HSERO_RS01600 0.45 +0.7 355,178 + HSERO_RS01600 0.52 -0.6 355,497 - -0.1 355,552 + +0.3 355,557 + +0.2 355,859 + HSERO_RS01605 0.19 +1.0 356,070 + HSERO_RS01605 0.35 +0.3 356,384 + HSERO_RS01605 0.60 +4.1 356,451 - HSERO_RS01605 0.65 +0.5 356,504 - HSERO_RS01605 0.70 +0.1 356,514 - HSERO_RS01605 0.70 +0.2 356,525 - HSERO_RS01605 0.71 +0.5 356,742 - HSERO_RS01605 0.88 +1.4 356,765 - +0.6 356,914 - +0.0 357,042 + -1.3 357,403 - +0.2 357,419 + +2.6 357,479 - +0.8 357,546 + +0.7
Or see this region's nucleotide sequence