Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03830

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
3,993,665	+				+0.3
3,993,667	-				+0.1
3,993,667	-				+0.4
3,993,673	+				+1.0
3,993,714	+				+0.5
3,994,238	-		CCNA_03829	0.30	+0.3
3,994,243	+		CCNA_03829	0.34	+0.0
3,994,251	-		CCNA_03829	0.40	-1.2
3,994,276	+		CCNA_03829	0.57	+2.5
3,994,276	+		CCNA_03829	0.57	-2.0
3,994,284	-		CCNA_03829	0.63	+1.0
3,994,289	-		CCNA_03829	0.67	+1.7
3,994,305	+		CCNA_03829	0.78	+1.0
3,994,313	-		CCNA_03829	0.84	-0.1
3,994,314	-		CCNA_03829	0.84	-1.5
3,994,322	+				-0.3
3,994,402	+				+1.9
3,994,480	-				-1.0
3,994,519	+				+1.4
3,994,622	+				+1.9
3,994,631	-				-1.4
3,994,644	+				+0.6
3,994,675	+				+2.4
3,994,695	+				+1.7
3,994,710	+				-0.1
3,994,710	+				+2.3
3,994,727	-				-1.6
3,994,734	+				+2.5
3,994,749	+		CCNA_03830	0.11	+0.6
3,994,756	+		CCNA_03830	0.12	+1.9
3,994,766	+		CCNA_03830	0.13	+1.7
3,994,768	-		CCNA_03830	0.13	-1.3
3,994,771	+		CCNA_03830	0.13	+1.8
3,994,774	-		CCNA_03830	0.13	-1.6
3,994,774	-		CCNA_03830	0.13	-0.4
3,994,774	-		CCNA_03830	0.13	-1.6
3,994,774	-		CCNA_03830	0.13	-0.1
3,994,776	+				+3.3
3,994,776	+		CCNA_03830	0.14	+1.2
3,994,776	+		CCNA_03830	0.14	+1.2
3,994,784	-		CCNA_03830	0.14	-2.3
3,994,794	+		CCNA_03830	0.15	+1.9
3,994,846	-		CCNA_03830	0.20	-0.9
3,994,857	-		CCNA_03830	0.21	-0.5
3,994,859	+		CCNA_03830	0.21	+1.6
3,994,859	+		CCNA_03830	0.21	+1.8
3,994,878	+		CCNA_03830	0.23	+1.4
3,994,905	+		CCNA_03830	0.25	+0.9
3,994,960	+		CCNA_03830	0.30	+1.9
3,994,960	+		CCNA_03830	0.30	+2.3
3,994,968	-		CCNA_03830	0.31	+2.7
3,994,968	-		CCNA_03830	0.31	+1.9
3,994,968	-		CCNA_03830	0.31	-0.3
3,994,968	-		CCNA_03830	0.31	+0.1
3,994,980	+		CCNA_03830	0.32	+2.4
3,995,005	+		CCNA_03830	0.34	+1.5
3,995,007	+		CCNA_03830	0.34	+2.4
3,995,058	-		CCNA_03830	0.39	+0.5
3,995,069	+		CCNA_03830	0.40	+1.6
3,995,069	+		CCNA_03830	0.40	+2.6
3,995,072	-		CCNA_03830	0.40	+1.2
3,995,077	-		CCNA_03830	0.41	+0.5
3,995,091	+		CCNA_03830	0.42	+1.6
3,995,201	-		CCNA_03830	0.52	-1.0
3,995,201	-		CCNA_03830	0.52	+0.8
3,995,206	+		CCNA_03830	0.52	+2.4
3,995,246	+		CCNA_03830	0.56	+1.5
3,995,254	-		CCNA_03830	0.57	+0.6
3,995,254	-		CCNA_03830	0.57	-0.8
3,995,254	-		CCNA_03830	0.57	+0.7
3,995,258	-		CCNA_03830	0.57	-0.2
3,995,285	+		CCNA_03830	0.59	+2.0
3,995,293	-		CCNA_03830	0.60	+0.5
3,995,293	-		CCNA_03830	0.60	+1.8
3,995,346	+		CCNA_03830	0.65	+1.5
3,995,354	-		CCNA_03830	0.66	-0.6
3,995,359	-		CCNA_03830	0.66	+0.7
3,995,375	+		CCNA_03830	0.67	+1.2
3,995,375	+		CCNA_03830	0.67	+0.5
3,995,375	+		CCNA_03830	0.67	+0.6
3,995,375	+		CCNA_03830	0.67	+1.7
3,995,375	+		CCNA_03830	0.67	+1.9
3,995,375	+		CCNA_03830	0.67	+2.0
3,995,375	+		CCNA_03830	0.67	+1.3
3,995,375	+		CCNA_03830	0.67	+1.3
3,995,375	+		CCNA_03830	0.67	+0.9
3,995,375	+		CCNA_03830	0.67	+1.8
3,995,375	+		CCNA_03830	0.67	+2.2
3,995,375	+		CCNA_03830	0.67	+0.4
3,995,383	-		CCNA_03830	0.68	-2.0
3,995,383	-		CCNA_03830	0.68	-0.1
3,995,383	-		CCNA_03830	0.68	-0.6
3,995,383	-		CCNA_03830	0.68	-1.8
3,995,383	-		CCNA_03830	0.68	-1.9
3,995,383	-		CCNA_03830	0.68	+0.1
3,995,383	-		CCNA_03830	0.68	+0.7
3,995,384	-		CCNA_03830	0.68	+0.4
3,995,392	+		CCNA_03830	0.69	+3.9
3,995,401	-		CCNA_03830	0.70	-0.1
3,995,508	+		CCNA_03830	0.79	+1.8
3,995,508	+		CCNA_03830	0.79	+2.1
3,995,508	+		CCNA_03830	0.79	+1.7
3,995,508	+		CCNA_03830	0.79	+2.3
3,995,508	+		CCNA_03830	0.79	+1.1
3,995,516	-		CCNA_03830	0.80	-2.4
3,995,525	+		CCNA_03830	0.81	+0.9
3,995,568	-		CCNA_03830	0.85	-1.2
3,995,747	+				-1.4
3,995,755	-				-1.3
3,995,813	-				-0.3
3,995,823	+				+1.8
3,995,842	-				+2.7
3,995,864	-				-1.0
3,995,866	+				+1.0
3,995,866	+				-0.4
3,995,866	+				+1.1
3,995,866	+				-0.9
3,995,874	-				+0.8
3,995,884	+				+1.2
3,995,898	-				-2.4
3,995,937	+		CCNA_03831	0.12	+0.7
3,995,940	-		CCNA_03831	0.12	+2.3
3,995,942	+		CCNA_03831	0.12	+1.0
3,995,942	+		CCNA_03831	0.12	-0.1
3,995,942	+		CCNA_03831	0.12	+3.1
3,995,955	-		CCNA_03831	0.13	+0.9
3,996,019	+		CCNA_03831	0.17	+0.7
3,996,037	+		CCNA_03831	0.18	+0.7
3,996,120	+		CCNA_03831	0.23	+1.8
3,996,187	+		CCNA_03831	0.27	+0.7
3,996,224	-		CCNA_03831	0.30	-0.6
3,996,258	+		CCNA_03831	0.32	+1.2
3,996,258	+		CCNA_03831	0.32	-1.4
3,996,258	+		CCNA_03831	0.32	+0.5
3,996,266	-		CCNA_03831	0.32	-1.3
3,996,266	-		CCNA_03831	0.32	-0.8
3,996,270	+		CCNA_03831	0.32	-0.1
3,996,278	-		CCNA_03831	0.33	-1.1
3,996,337	-		CCNA_03831	0.37	+0.1
3,996,343	+		CCNA_03831	0.37	+1.4
3,996,351	-		CCNA_03831	0.38	-0.4
3,996,391	+		CCNA_03831	0.40	+0.5
3,996,414	+		CCNA_03831	0.41	-0.8
3,996,476	+		CCNA_03831	0.45	+0.7
3,996,476	-		CCNA_03831	0.45	-0.5
3,996,503	-		CCNA_03831	0.47	+0.1
3,996,542	-		CCNA_03831	0.49	-0.3
3,996,554	+		CCNA_03831	0.50	+0.4
3,996,563	-		CCNA_03831	0.51	+1.5
3,996,618	+		CCNA_03831	0.54	+0.4
3,996,645	-		CCNA_03831	0.56	-0.5
3,996,681	+		CCNA_03831	0.58	+3.7
3,996,705	-		CCNA_03831	0.60	-0.8
3,996,708	+		CCNA_03831	0.60	+0.2
3,996,735	+		CCNA_03831	0.61	+1.7