Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03690

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
3,855,103	+		CCNA_03689	0.20	+3.2
3,855,103	+		CCNA_03689	0.20	+3.3
3,855,103	+		CCNA_03689	0.20	+2.6
3,855,103	+		CCNA_03689	0.20	+2.8
3,855,111	-		CCNA_03689	0.20	-1.7
3,855,118	-		CCNA_03689	0.21	-2.0
3,855,155	+				+4.2
3,855,155	+		CCNA_03689	0.24	+3.4
3,855,163	-		CCNA_03689	0.25	-0.3
3,855,205	+		CCNA_03689	0.29	+3.1
3,855,205	+		CCNA_03689	0.29	+3.1
3,855,205	+		CCNA_03689	0.29	+2.7
3,855,224	+		CCNA_03689	0.30	+4.1
3,855,305	+		CCNA_03689	0.38	+3.6
3,855,328	-		CCNA_03689	0.40	-1.3
3,855,364	-		CCNA_03689	0.43	-0.8
3,855,369	-		CCNA_03689	0.43	-2.3
3,855,383	+		CCNA_03689	0.45	+3.4
3,855,391	-		CCNA_03689	0.45	-1.0
3,855,409	-		CCNA_03689	0.47	+0.9
3,855,480	+		CCNA_03689	0.53	+3.1
3,855,518	-		CCNA_03689	0.57	+1.1
3,855,545	+		CCNA_03689	0.59	+2.7
3,855,571	+		CCNA_03689	0.62	+3.0
3,855,571	+		CCNA_03689	0.62	+2.9
3,855,571	+		CCNA_03689	0.62	+2.7
3,855,579	-		CCNA_03689	0.62	-2.1
3,855,599	+		CCNA_03689	0.64	+3.6
3,855,599	+		CCNA_03689	0.64	+3.6
3,855,634	-		CCNA_03689	0.67	-1.2
3,855,646	+				+4.7
3,855,646	+		CCNA_03689	0.68	+3.6
3,855,646	+		CCNA_03689	0.68	+3.4
3,855,654	-		CCNA_03689	0.69	-0.5
3,855,654	-		CCNA_03689	0.69	-2.1
3,855,663	-		CCNA_03689	0.70	-1.2
3,855,666	+		CCNA_03689	0.70	+2.6
3,855,700	-		CCNA_03689	0.73	-2.1
3,855,705	+		CCNA_03689	0.74	+3.1
3,855,705	+		CCNA_03689	0.74	+3.5
3,855,705	+		CCNA_03689	0.74	+3.6
3,855,729	+		CCNA_03689	0.76	+2.8
3,855,737	+		CCNA_03689	0.77	+3.4
3,855,737	-		CCNA_03689	0.77	-2.7
3,855,743	+		CCNA_03689	0.77	+3.4
3,855,764	+		CCNA_03689	0.79	+3.2
3,855,764	+		CCNA_03689	0.79	+3.5
3,855,764	+		CCNA_03689	0.79	+2.9
3,855,764	+		CCNA_03689	0.79	+3.1
3,855,764	+		CCNA_03689	0.79	+3.3
3,855,764	+		CCNA_03689	0.79	+4.0
3,855,764	+		CCNA_03689	0.79	+3.5
3,855,764	+		CCNA_03689	0.79	+3.9
3,855,764	+		CCNA_03689	0.79	+3.9
3,855,764	+		CCNA_03689	0.79	+3.7
3,855,764	+		CCNA_03689	0.79	+3.6
3,855,764	+		CCNA_03689	0.79	+3.6
3,855,764	+		CCNA_03689	0.79	+3.6
3,855,772	-		CCNA_03689	0.80	-0.4
3,855,772	-		CCNA_03689	0.80	-3.1
3,855,792	+		CCNA_03689	0.81	+3.4
3,855,818	+		CCNA_03689	0.84	+3.3
3,855,818	+		CCNA_03689	0.84	+3.5
3,855,818	-		CCNA_03689	0.84	-0.3
3,855,826	-		CCNA_03689	0.85	-1.8
3,855,833	+		CCNA_03689	0.85	+5.7
3,855,833	+		CCNA_03689	0.85	+3.4
3,855,833	+		CCNA_03689	0.85	+3.4
3,855,840	+		CCNA_03689	0.86	+3.5
3,855,841	-		CCNA_03689	0.86	-2.6
3,855,844	-		CCNA_03689	0.86	-0.0
3,855,854	-		CCNA_03689	0.87	+0.1
3,855,866	+		CCNA_03689	0.88	+3.2
3,855,883	+		CCNA_03689	0.90	+3.6
3,855,884	-		CCNA_03689	0.90	-1.2
3,855,893	+				+3.6
3,855,914	+				+3.3
3,855,922	-				-1.8
3,855,958	+				+3.2
3,855,958	+				+4.2
3,855,987	-				-0.8
3,856,022	-				-1.1
3,856,036	+				+1.7
3,856,074	+				-2.1
3,856,114	+				+2.1
3,856,122	-				+1.3
3,856,123	+				-0.3
3,856,229	+		CCNA_03690	0.19	+3.2
3,856,242	-		CCNA_03690	0.21	+1.1
3,856,247	-		CCNA_03690	0.22	+1.5
3,856,249	+		CCNA_03690	0.22	+0.9
3,856,257	-		CCNA_03690	0.23	+1.9
3,856,261	+		CCNA_03690	0.24	-2.5
3,856,261	+		CCNA_03690	0.24	+0.2
3,856,278	-		CCNA_03690	0.26	+1.1
3,856,341	+		CCNA_03690	0.35	+0.7
3,856,427	-		CCNA_03690	0.47	+1.3
3,856,427	-		CCNA_03690	0.47	+0.7
3,856,439	+		CCNA_03690	0.49	-3.2
3,856,444	+		CCNA_03690	0.50	-1.1
3,856,444	+		CCNA_03690	0.50	-0.4
3,856,452	-		CCNA_03690	0.51	+0.8
3,856,452	-		CCNA_03690	0.51	+1.2
3,856,452	-		CCNA_03690	0.51	+0.7
3,856,452	-		CCNA_03690	0.51	+1.0
3,856,452	-		CCNA_03690	0.51	+1.4
3,856,452	-		CCNA_03690	0.51	+0.9
3,856,452	-		CCNA_03690	0.51	+1.1
3,856,452	-		CCNA_03690	0.51	+0.9
3,856,463	-		CCNA_03690	0.52	+1.2
3,856,539	+		CCNA_03690	0.63	+0.4
3,856,547	-		CCNA_03690	0.64	+1.1
3,856,595	+		CCNA_03690	0.71	+0.7
3,856,603	-		CCNA_03690	0.72	-0.6
3,856,664	+		CCNA_03690	0.81	-2.3
3,856,685	+		CCNA_03690	0.84	+0.3
3,856,693	-		CCNA_03690	0.85	+0.1
3,856,712	+		CCNA_03690	0.88	+1.5
3,856,714	+		CCNA_03690	0.88	+1.2
3,856,720	-		CCNA_03690	0.89	-2.4
3,856,723	+		CCNA_03690	0.89	+0.9
3,856,725	+				+2.2
3,856,725	+		CCNA_03690	0.90	-0.5
3,856,736	+				-0.9
3,856,800	-				+0.8
3,856,800	-				+0.2
3,856,825	-				-0.8
3,856,870	+				+2.6
3,856,882	+				-0.7
3,856,890	-				+0.8
3,856,890	-				+0.2
3,856,890	-				+3.4
3,856,890	-				+1.1
3,856,892	+				-0.3
3,856,892	+				-1.0
3,856,900	-				+1.1
3,856,900	-				+1.3
3,856,902	+				+1.6
3,856,910	-				+1.4
3,856,910	-				-1.7
3,856,923	+				-0.0
3,856,925	+				-2.1
3,856,945	+				+2.9
3,856,968	-				+1.2
3,857,061	+		CCNA_03691	0.11	-0.8
3,857,071	+		CCNA_03691	0.12	+2.7
3,857,083	+		CCNA_03691	0.14	-1.6
3,857,093	+		CCNA_03691	0.15	-0.0
3,857,115	+		CCNA_03691	0.17	-0.2
3,857,123	-		CCNA_03691	0.18	+1.5
3,857,123	-		CCNA_03691	0.18	+1.4
3,857,125	+		CCNA_03691	0.18	-2.3
3,857,125	+		CCNA_03691	0.18	-0.9
3,857,125	+		CCNA_03691	0.18	-1.4
3,857,133	-		CCNA_03691	0.19	+2.0
3,857,140	-		CCNA_03691	0.20	+2.3
3,857,140	-		CCNA_03691	0.20	+1.6
3,857,152	+		CCNA_03691	0.21	-1.3
3,857,157	+		CCNA_03691	0.22	-0.8
3,857,160	-		CCNA_03691	0.22	+1.1
3,857,160	-		CCNA_03691	0.22	+0.8
3,857,160	-		CCNA_03691	0.22	+0.1
3,857,208	+		CCNA_03691	0.28	-0.8
3,857,208	+		CCNA_03691	0.28	-2.1
3,857,208	+		CCNA_03691	0.28	-0.5
3,857,208	+		CCNA_03691	0.28	-1.0
3,857,208	+		CCNA_03691	0.28	-1.0
3,857,216	-		CCNA_03691	0.29	+1.5
3,857,216	-		CCNA_03691	0.29	+1.7
3,857,216	-		CCNA_03691	0.29	+1.6
3,857,245	+		CCNA_03691	0.32	-3.5
3,857,283	-		CCNA_03691	0.36	+0.1
3,857,303	+		CCNA_03691	0.39	+0.3
3,857,356	-		CCNA_03691	0.45	+1.7
3,857,357	-		CCNA_03691	0.45	+1.7
3,857,364	-		CCNA_03691	0.46	+1.2
3,857,370	+		CCNA_03691	0.46	-1.1
3,857,384	+		CCNA_03691	0.48	+0.7
3,857,416	-		CCNA_03691	0.51	+1.8
3,857,459	+		CCNA_03691	0.56	-0.5
3,857,557	+		CCNA_03691	0.67	-2.5
3,857,560	-		CCNA_03691	0.68	+1.2
3,857,567	+		CCNA_03691	0.69	-0.0
3,857,570	-		CCNA_03691	0.69	+2.8
3,857,578	+		CCNA_03691	0.70	-0.7
3,857,584	+		CCNA_03691	0.71	+0.7
3,857,586	-		CCNA_03691	0.71	+0.8
3,857,593	-		CCNA_03691	0.72	+1.4
3,857,593	-		CCNA_03691	0.72	+0.4
3,857,627	+		CCNA_03691	0.75	-2.4
3,857,627	+		CCNA_03691	0.75	-0.9
3,857,627	+		CCNA_03691	0.75	-2.0
3,857,627	+		CCNA_03691	0.75	-0.9
3,857,635	-		CCNA_03691	0.76	+1.8
3,857,637	-		CCNA_03691	0.77	+1.4
3,857,644	+				+1.7
3,857,652	-		CCNA_03691	0.78	+1.6
3,857,654	+		CCNA_03691	0.78	+1.2
3,857,662	-		CCNA_03691	0.79	+1.0
3,857,662	-		CCNA_03691	0.79	+1.7
3,857,664	+		CCNA_03691	0.80	-0.2
3,857,664	+		CCNA_03691	0.80	-1.6
3,857,664	+		CCNA_03691	0.80	+0.1
3,857,664	+		CCNA_03691	0.80	+1.5
3,857,678	+		CCNA_03691	0.81	-1.7
3,857,681	-		CCNA_03691	0.82	+1.4
3,857,683	+		CCNA_03691	0.82	-0.6
3,857,683	+		CCNA_03691	0.82	-1.7
3,857,683	+		CCNA_03691	0.82	+0.1
3,857,683	+		CCNA_03691	0.82	-1.8
3,857,683	+		CCNA_03691	0.82	-2.0
3,857,683	+		CCNA_03691	0.82	-1.3
3,857,683	+		CCNA_03691	0.82	-1.1
3,857,683	-		CCNA_03691	0.82	+1.8
3,857,685	+		CCNA_03691	0.82	-1.8
3,857,685	+		CCNA_03691	0.82	-3.2
3,857,686	-		CCNA_03691	0.82	+0.9
3,857,691	-		CCNA_03691	0.83	+2.2
3,857,691	-		CCNA_03691	0.83	+1.8
3,857,691	-		CCNA_03691	0.83	+1.3
3,857,691	-		CCNA_03691	0.83	+1.3
3,857,693	+		CCNA_03691	0.83	-1.3
3,857,693	+		CCNA_03691	0.83	-0.9
3,857,693	+		CCNA_03691	0.83	-0.8
3,857,700	+		CCNA_03691	0.84	-0.7
3,857,700	+		CCNA_03691	0.84	-2.6
3,857,701	-		CCNA_03691	0.84	+0.5
3,857,702	+		CCNA_03691	0.84	-1.4
3,857,707	+		CCNA_03691	0.85	-2.0
3,857,708	-		CCNA_03691	0.85	+1.3
3,857,726	+		CCNA_03691	0.87	-0.7
3,857,726	+		CCNA_03691	0.87	-0.1
3,857,726	+		CCNA_03691	0.87	-1.3
3,857,726	+		CCNA_03691	0.87	-3.0
3,857,726	+		CCNA_03691	0.87	-1.5
3,857,726	+		CCNA_03691	0.87	-2.2
3,857,726	+		CCNA_03691	0.87	+1.7
3,857,734	-		CCNA_03691	0.88	+0.6
3,857,734	-		CCNA_03691	0.88	+1.0
3,857,734	-		CCNA_03691	0.88	+0.5
3,857,734	-		CCNA_03691	0.88	+1.2
3,857,734	-		CCNA_03691	0.88	+1.9
3,857,741	+		CCNA_03691	0.88	-2.8
3,857,782	-				+0.8
3,857,783	-				+0.3