Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03199

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
3,357,740	+				+0.5
3,357,787	-				+1.4
3,357,802	+				-1.7
3,357,802	-				+1.3
3,357,820	-				+1.6
3,357,837	+				-2.9
3,357,837	+				+0.5
3,357,845	-				+1.3
3,357,852	+				+0.6
3,357,859	+				-1.0
3,357,893	+		CCNA_03198	0.14	-1.6
3,357,893	-		CCNA_03198	0.14	+3.1
3,357,901	-		CCNA_03198	0.15	+1.9
3,357,907	-		CCNA_03198	0.15	+1.8
3,357,917	-		CCNA_03198	0.17	+1.7
3,357,963	-		CCNA_03198	0.22	+0.1
3,358,012	-		CCNA_03198	0.28	+1.2
3,358,012	-		CCNA_03198	0.28	-0.3
3,358,049	-		CCNA_03198	0.33	+1.9
3,358,071	-		CCNA_03198	0.36	+2.4
3,358,080	+		CCNA_03198	0.37	+2.7
3,358,096	+		CCNA_03198	0.39	+3.2
3,358,098	+		CCNA_03198	0.39	+0.2
3,358,098	+		CCNA_03198	0.39	-2.1
3,358,098	+		CCNA_03198	0.39	+0.4
3,358,098	+		CCNA_03198	0.39	-0.8
3,358,104	-		CCNA_03198	0.40	+1.2
3,358,106	-		CCNA_03198	0.40	+2.3
3,358,106	-		CCNA_03198	0.40	+2.0
3,358,106	-		CCNA_03198	0.40	+1.6
3,358,106	-		CCNA_03198	0.40	+2.4
3,358,108	-		CCNA_03198	0.40	+2.4
3,358,132	-		CCNA_03198	0.43	+2.2
3,358,152	+		CCNA_03198	0.46	+0.2
3,358,152	+		CCNA_03198	0.46	-1.9
3,358,152	+		CCNA_03198	0.46	-0.8
3,358,152	+		CCNA_03198	0.46	-1.0
3,358,152	+		CCNA_03198	0.46	-2.2
3,358,179	-		CCNA_03198	0.49	+2.1
3,358,295	+		CCNA_03198	0.63	-1.7
3,358,295	+		CCNA_03198	0.63	-0.4
3,358,317	-		CCNA_03198	0.66	+1.5
3,358,327	-		CCNA_03198	0.67	+1.4
3,358,389	+		CCNA_03198	0.75	-1.3
3,358,415	+		CCNA_03198	0.78	-1.1
3,358,415	+		CCNA_03198	0.78	+0.2
3,358,421	+		CCNA_03198	0.79	-1.7
3,358,422	+		CCNA_03198	0.79	-2.4
3,358,423	-		CCNA_03198	0.79	+1.9
3,358,429	+		CCNA_03198	0.80	-1.0
3,358,430	-		CCNA_03198	0.80	+3.9
3,358,430	-		CCNA_03198	0.80	+2.0
3,358,430	-		CCNA_03198	0.80	+1.1
3,358,430	-		CCNA_03198	0.80	+1.7
3,358,435	-		CCNA_03198	0.81	+2.7
3,358,454	+		CCNA_03198	0.83	+0.7
3,358,454	+		CCNA_03198	0.83	+0.3
3,358,454	+		CCNA_03198	0.83	-2.1
3,358,462	-		CCNA_03198	0.84	+0.8
3,358,503	-		CCNA_03198	0.89	+1.2
3,358,509	+		CCNA_03198	0.90	-1.5
3,358,509	+		CCNA_03198	0.90	-1.5
3,358,509	+		CCNA_03198	0.90	-2.1
3,358,509	+		CCNA_03198	0.90	-2.0
3,358,509	+		CCNA_03198	0.90	-3.1
3,358,517	-				+1.2
3,358,517	-				+1.8
3,358,517	-				+1.9
3,358,517	-				+1.9
3,358,517	-				+2.6
3,358,517	-				+0.5
3,358,532	+				-0.0
3,358,533	-				+1.6
3,358,533	-				+0.9
3,358,540	-				+1.9
3,358,541	-				+1.3
3,358,558	+				-1.9
3,358,558	+				-1.7
3,358,563	+				+1.3
3,358,566	-				+1.7
3,358,594	+				-1.3
3,358,602	-				+2.1
3,358,607	+				-2.2
3,358,615	-				+2.7
3,358,626	-				-0.6
3,358,630	+				-3.0
3,358,679	+				-1.0
3,358,679	+				-2.0
3,358,685	+				-2.6
3,358,685	+				+0.8
3,358,687	-				+2.1
3,358,687	-				-0.8
3,358,693	-				-2.1
3,358,777	+				-1.3
3,358,779	+				-1.7
3,358,787	+		CCNA_03199	0.11	-1.7
3,358,787	+		CCNA_03199	0.11	-1.6
3,358,787	+		CCNA_03199	0.11	+0.2
3,358,787	+		CCNA_03199	0.11	-1.5
3,358,787	-		CCNA_03199	0.11	-2.4
3,358,795	-		CCNA_03199	0.11	-0.6
3,358,795	-		CCNA_03199	0.11	-2.7
3,358,805	-		CCNA_03199	0.12	-1.8
3,358,805	-		CCNA_03199	0.12	-0.9
3,358,810	+		CCNA_03199	0.13	-1.9
3,358,810	+		CCNA_03199	0.13	-0.4
3,358,818	-		CCNA_03199	0.13	-1.3
3,358,909	-		CCNA_03199	0.21	-3.5
3,358,943	+		CCNA_03199	0.24	+0.0
3,359,079	+		CCNA_03199	0.36	+3.3
3,359,108	+		CCNA_03199	0.39	-2.4
3,359,109	+		CCNA_03199	0.39	+0.7
3,359,119	+		CCNA_03199	0.40	-2.3
3,359,119	+		CCNA_03199	0.40	+2.0
3,359,119	+		CCNA_03199	0.40	-2.0
3,359,119	+		CCNA_03199	0.40	-2.1
3,359,127	-		CCNA_03199	0.40	-0.3
3,359,127	-		CCNA_03199	0.40	-0.9
3,359,127	-		CCNA_03199	0.40	-0.7
3,359,127	-		CCNA_03199	0.40	-1.8
3,359,127	-		CCNA_03199	0.40	-2.4
3,359,135	+		CCNA_03199	0.41	-1.9
3,359,135	-		CCNA_03199	0.41	+0.4
3,359,169	+		CCNA_03199	0.44	+0.2
3,359,203	-		CCNA_03199	0.47	+0.1
3,359,203	-		CCNA_03199	0.47	+0.3
3,359,203	-		CCNA_03199	0.47	-0.2
3,359,203	-		CCNA_03199	0.47	-1.3
3,359,204	-		CCNA_03199	0.47	+0.9
3,359,252	-		CCNA_03199	0.51	+1.5
3,359,289	-		CCNA_03199	0.55	+1.1
3,359,296	-		CCNA_03199	0.55	+0.4
3,359,296	-		CCNA_03199	0.55	+1.2
3,359,296	-		CCNA_03199	0.55	+0.5
3,359,328	-		CCNA_03199	0.58	+0.5
3,359,333	-		CCNA_03199	0.58	+0.2
3,359,357	+		CCNA_03199	0.61	+0.3
3,359,387	-		CCNA_03199	0.63	+1.1
3,359,411	+		CCNA_03199	0.65	-0.5
3,359,442	-		CCNA_03199	0.68	+1.5
3,359,469	+		CCNA_03199	0.70	-2.8
3,359,469	+				+2.0
3,359,477	-		CCNA_03199	0.71	+0.8
3,359,477	-		CCNA_03199	0.71	+0.0
3,359,490	+		CCNA_03199	0.72	-0.3
3,359,509	+		CCNA_03199	0.74	-0.3
3,359,542	+		CCNA_03199	0.77	-2.7
3,359,573	-		CCNA_03199	0.79	-0.1
3,359,574	+		CCNA_03199	0.80	-1.8
3,359,608	-		CCNA_03199	0.83	+1.9
3,359,614	+		CCNA_03199	0.83	+3.3
3,359,667	-		CCNA_03199	0.88	-2.3
3,359,675	+		CCNA_03199	0.88	-0.1
3,359,676	+		CCNA_03199	0.89	-0.7
3,359,704	+				+0.8
3,359,715	+				+2.0
3,359,722	-				+2.2
3,359,722	-				-0.6
3,359,722	-				-2.2
3,359,722	-				-0.2
3,359,747	-				-0.0
3,359,774	-				+0.1
3,359,774	-				+0.7
3,359,775	+				-2.7
3,359,783	-				-1.3
3,359,818	+				+0.3
3,359,818	+				+0.7
3,359,826	-				-0.9
3,359,826	-				+0.7
3,359,826	-				+1.6
3,359,826	-				-0.6
3,359,826	-				-0.5
3,359,923	-				+1.2
3,359,934	+				-1.6
3,359,939	+				-1.8
3,359,944	+				-2.1
3,359,954	+				+0.2
3,359,989	-				+0.4
3,360,006	-				-0.0
3,360,021	+				-0.4
3,360,023	-				+1.5
3,360,029	-				+0.5
3,360,029	-				+1.4
3,360,061	-				+0.8
3,360,071	+				-0.5
3,360,071	+				+0.7
3,360,079	-				+1.3
3,360,079	-				+0.5
3,360,094	-		CCNA_03200	0.11	+3.7
3,360,094	-		CCNA_03200	0.11	+0.4
3,360,099	-		CCNA_03200	0.11	+1.8
3,360,127	+		CCNA_03200	0.13	-0.2
3,360,135	-		CCNA_03200	0.13	+0.8
3,360,157	-		CCNA_03200	0.14	+1.0
3,360,180	-		CCNA_03200	0.16	-0.1
3,360,206	-		CCNA_03200	0.17	+0.3
3,360,216	+		CCNA_03200	0.18	-1.2
3,360,225	-		CCNA_03200	0.18	+0.3
3,360,225	-		CCNA_03200	0.18	+0.9
3,360,255	-		CCNA_03200	0.20	+0.4
3,360,305	+		CCNA_03200	0.23	-1.7
3,360,342	-		CCNA_03200	0.25	+0.5
3,360,374	+		CCNA_03200	0.27	-2.6
3,360,460	-		CCNA_03200	0.32	+0.9
3,360,471	+		CCNA_03200	0.33	-2.0
3,360,471	+		CCNA_03200	0.33	+1.2
3,360,493	-		CCNA_03200	0.34	+0.7
3,360,508	+		CCNA_03200	0.35	-0.9
3,360,513	+		CCNA_03200	0.35	-2.1
3,360,513	+		CCNA_03200	0.35	+0.5
3,360,518	+		CCNA_03200	0.35	-0.2
3,360,521	-		CCNA_03200	0.35	+3.4
3,360,526	-		CCNA_03200	0.36	+1.1
3,360,527	-		CCNA_03200	0.36	+2.1
3,360,534	-		CCNA_03200	0.36	+0.4
3,360,534	-		CCNA_03200	0.36	+0.9
3,360,648	+		CCNA_03200	0.43	+0.7
3,360,676	-		CCNA_03200	0.44	-0.1
3,360,686	-		CCNA_03200	0.45	+0.9
3,360,718	-		CCNA_03200	0.47	+2.6
3,360,740	+		CCNA_03200	0.48	-0.0
3,360,754	+		CCNA_03200	0.49	-1.1
3,360,754	+		CCNA_03200	0.49	-0.9
3,360,754	+		CCNA_03200	0.49	+2.7
3,360,754	-		CCNA_03200	0.49	+0.9
3,360,762	-		CCNA_03200	0.49	-0.5
3,360,762	-		CCNA_03200	0.49	+0.0
3,360,774	+		CCNA_03200	0.50	+2.1
3,360,774	+		CCNA_03200	0.50	+1.0
3,360,782	-		CCNA_03200	0.51	-1.3
3,360,782	-		CCNA_03200	0.51	-0.4
3,360,789	+		CCNA_03200	0.51	+0.4
3,360,797	-		CCNA_03200	0.51	-0.9
3,360,797	-		CCNA_03200	0.51	+1.8
3,360,805	-		CCNA_03200	0.52	+1.7