Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03094

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
3,241,876	-		CCNA_03092	0.78	+0.1
3,241,876	-		CCNA_03092	0.78	+2.5
3,241,885	-		CCNA_03092	0.79	-0.9
3,241,910	+		CCNA_03092	0.81	+1.2
3,241,958	+		CCNA_03092	0.84	+0.6
3,241,958	+		CCNA_03092	0.84	+0.6
3,241,964	+		CCNA_03092	0.84	+0.9
3,241,966	-		CCNA_03092	0.85	-1.4
3,241,996	+		CCNA_03092	0.87	+1.1
3,241,996	+		CCNA_03092	0.87	+0.9
3,242,004	-		CCNA_03092	0.87	-1.6
3,242,014	+		CCNA_03092	0.88	+2.9
3,242,019	-		CCNA_03092	0.88	-1.2
3,242,026	+		CCNA_03092	0.89	+0.0
3,242,026	+		CCNA_03092	0.89	+1.8
3,242,034	-		CCNA_03092	0.90	-2.1
3,242,034	-		CCNA_03092	0.90	-1.5
3,242,052	+				+0.2
3,242,057	+				+1.3
3,242,075	+				+3.0
3,242,108	+				+0.5
3,242,126	-				+0.1
3,242,128	+				+0.3
3,242,158	+				+0.6
3,242,158	+				+1.0
3,242,177	+				-0.2
3,242,178	+				-0.1
3,242,183	+				-1.6
3,242,183	+				+1.8
3,242,183	+				+0.6
3,242,183	+				-0.2
3,242,183	+				+0.4
3,242,183	+				-0.3
3,242,186	-				+1.9
3,242,190	+				+2.7
3,242,191	-				-0.3
3,242,191	-				-1.0
3,242,191	-				-0.9
3,242,191	-				-2.4
3,242,191	-				-0.7
3,242,191	-				-1.3
3,242,191	-				-0.3
3,242,201	-				-1.1
3,242,222	+				+0.7
3,242,236	+				+0.7
3,242,281	-				+0.6
3,242,281	-				+0.2
3,242,294	+		CCNA_03093	0.13	+1.4
3,242,297	+		CCNA_03093	0.13	+1.2
3,242,297	+		CCNA_03093	0.13	+1.3
3,242,297	+		CCNA_03093	0.13	+2.0
3,242,297	+		CCNA_03093	0.13	+1.4
3,242,297	+		CCNA_03093	0.13	+1.8
3,242,305	-		CCNA_03093	0.15	-1.1
3,242,305	-		CCNA_03093	0.15	+0.9
3,242,305	-		CCNA_03093	0.15	+0.4
3,242,349	-		CCNA_03093	0.26	+0.1
3,242,349	-		CCNA_03093	0.26	+1.7
3,242,351	+		CCNA_03093	0.26	+2.1
3,242,356	+		CCNA_03093	0.27	+0.8
3,242,356	+		CCNA_03093	0.27	+0.8
3,242,356	+		CCNA_03093	0.27	+0.9
3,242,428	-		CCNA_03093	0.44	-2.1
3,242,429	-		CCNA_03093	0.45	+2.3
3,242,434	+		CCNA_03093	0.46	+2.1
3,242,442	-		CCNA_03093	0.48	-0.9
3,242,442	-		CCNA_03093	0.48	-2.2
3,242,446	+		CCNA_03093	0.49	+0.8
3,242,452	-		CCNA_03093	0.50	+0.7
3,242,461	+		CCNA_03093	0.52	+1.1
3,242,475	+		CCNA_03093	0.56	+0.1
3,242,485	+		CCNA_03093	0.58	+2.7
3,242,541	-		CCNA_03093	0.71	-0.3
3,242,567	-		CCNA_03093	0.77	+0.4
3,242,567	-		CCNA_03093	0.77	+0.6
3,242,569	-		CCNA_03093	0.78	+1.6
3,242,589	-		CCNA_03093	0.83	-0.3
3,242,591	+		CCNA_03093	0.83	+1.6
3,242,599	-		CCNA_03093	0.85	-0.1
3,242,661	+				+1.3
3,242,661	+				+0.9
3,242,684	-				+0.3
3,242,685	+				+1.4
3,242,685	+				+1.1
3,242,693	-				+0.2
3,242,713	+				+0.8
3,242,736	+				-0.1
3,242,737	+				+2.4
3,242,837	-				+1.2
3,242,841	-				+0.7
3,242,879	-				+0.9
3,242,939	-				+1.6
3,242,939	-				+1.7
3,242,941	+				+1.4
3,243,018	+		CCNA_03094	0.15	-0.7
3,243,033	+		CCNA_03094	0.16	-0.9
3,243,043	+		CCNA_03094	0.17	-0.4
3,243,051	-		CCNA_03094	0.18	+1.5
3,243,051	-		CCNA_03094	0.18	+1.8
3,243,051	-		CCNA_03094	0.18	+0.5
3,243,131	+		CCNA_03094	0.25	+1.4
3,243,158	+		CCNA_03094	0.28	-1.9
3,243,173	-		CCNA_03094	0.29	+0.1
3,243,178	-		CCNA_03094	0.30	-1.0
3,243,185	-		CCNA_03094	0.30	-0.7
3,243,202	-		CCNA_03094	0.32	-1.7
3,243,231	+		CCNA_03094	0.35	-0.1
3,243,237	+		CCNA_03094	0.35	-1.6
3,243,250	+		CCNA_03094	0.36	-1.7
3,243,250	+		CCNA_03094	0.36	+1.2
3,243,250	+		CCNA_03094	0.36	-1.1
3,243,255	+		CCNA_03094	0.37	+0.3
3,243,258	-		CCNA_03094	0.37	-0.0
3,243,258	-		CCNA_03094	0.37	+1.0
3,243,260	+		CCNA_03094	0.37	+1.0
3,243,268	-		CCNA_03094	0.38	+3.2
3,243,448	-		CCNA_03094	0.55	-1.2
3,243,482	-		CCNA_03094	0.58	+1.2
3,243,521	-		CCNA_03094	0.62	+0.5
3,243,521	-		CCNA_03094	0.62	+0.8
3,243,534	+		CCNA_03094	0.63	+0.1
3,243,540	+		CCNA_03094	0.64	+0.3
3,243,610	+		CCNA_03094	0.70	-0.4
3,243,627	-		CCNA_03094	0.72	+0.4
3,243,665	+		CCNA_03094	0.76	+1.7
3,243,706	-		CCNA_03094	0.80	+0.7
3,243,706	-		CCNA_03094	0.80	+0.6
3,243,746	+		CCNA_03094	0.83	-1.4
3,243,751	+		CCNA_03094	0.84	-1.8
3,243,754	-		CCNA_03094	0.84	+0.7
3,243,754	-		CCNA_03094	0.84	+0.6
3,243,754	-		CCNA_03094	0.84	+0.9
3,243,774	+		CCNA_03094	0.86	+0.6
3,243,782	-		CCNA_03094	0.87	-0.5
3,243,807	-		CCNA_03094	0.89	-1.4
3,243,878	+				-0.4
3,244,048	-				-0.4
3,244,063	-				-1.8
3,244,098	+				+0.3
3,244,143	-		CCNA_03095	0.14	-1.3
3,244,145	+		CCNA_03095	0.14	-1.1
3,244,146	+		CCNA_03095	0.14	-1.6
3,244,148	-		CCNA_03095	0.14	-1.3
3,244,201	+		CCNA_03095	0.19	-1.4
3,244,237	-		CCNA_03095	0.23	+0.7
3,244,242	-		CCNA_03095	0.23	-2.0
3,244,249	+		CCNA_03095	0.24	+0.1
3,244,249	+		CCNA_03095	0.24	+0.3
3,244,253	+		CCNA_03095	0.25	-1.7
3,244,253	+		CCNA_03095	0.25	-0.1
3,244,253	+		CCNA_03095	0.25	-1.0
3,244,257	-		CCNA_03095	0.25	-1.8
3,244,257	-		CCNA_03095	0.25	-2.1
3,244,261	-		CCNA_03095	0.25	+0.0
3,244,261	-		CCNA_03095	0.25	-0.1
3,244,261	-		CCNA_03095	0.25	-1.1
3,244,261	-		CCNA_03095	0.25	-0.6
3,244,322	+		CCNA_03095	0.31	-1.9
3,244,330	-		CCNA_03095	0.32	+1.0
3,244,331	+		CCNA_03095	0.32	-1.3
3,244,331	+		CCNA_03095	0.32	-0.1
3,244,331	+		CCNA_03095	0.32	+0.2
3,244,331	+		CCNA_03095	0.32	-1.0
3,244,336	+		CCNA_03095	0.33	-2.0
3,244,339	-		CCNA_03095	0.33	-2.5
3,244,339	-		CCNA_03095	0.33	-1.3
3,244,344	-		CCNA_03095	0.33	-2.6
3,244,350	+		CCNA_03095	0.34	-0.4
3,244,350	+		CCNA_03095	0.34	-0.7
3,244,355	+		CCNA_03095	0.35	+0.9
3,244,356	-		CCNA_03095	0.35	-0.4
3,244,357	+		CCNA_03095	0.35	-0.3
3,244,358	-		CCNA_03095	0.35	-1.0
3,244,358	-		CCNA_03095	0.35	-1.7
3,244,388	+				+1.6
3,244,388	+		CCNA_03095	0.38	-1.5
3,244,388	+		CCNA_03095	0.38	+0.1
3,244,396	-		CCNA_03095	0.38	-0.6
3,244,401	+		CCNA_03095	0.39	+0.6
3,244,410	+		CCNA_03095	0.40	-0.8
3,244,412	+		CCNA_03095	0.40	-2.3
3,244,412	+		CCNA_03095	0.40	-1.2
3,244,412	+		CCNA_03095	0.40	-0.1
3,244,418	-		CCNA_03095	0.41	-0.4
3,244,418	-		CCNA_03095	0.41	-0.1
3,244,430	-		CCNA_03095	0.42	-1.2
3,244,440	-		CCNA_03095	0.43	-0.2
3,244,440	-		CCNA_03095	0.43	-0.8
3,244,543	+		CCNA_03095	0.53	-3.0
3,244,559	+		CCNA_03095	0.54	-2.1
3,244,588	+		CCNA_03095	0.57	+0.8
3,244,595	+		CCNA_03095	0.58	-2.1
3,244,596	-		CCNA_03095	0.58	+1.9
3,244,618	-		CCNA_03095	0.60	-0.0
3,244,625	-		CCNA_03095	0.61	-2.0
3,244,625	-		CCNA_03095	0.61	-0.7
3,244,625	-		CCNA_03095	0.61	-0.3
3,244,625	-		CCNA_03095	0.61	+0.1
3,244,625	-		CCNA_03095	0.61	+0.2
3,244,688	+		CCNA_03095	0.67	-1.6
3,244,696	-		CCNA_03095	0.68	+0.1
3,244,698	+		CCNA_03095	0.68	+1.7
3,244,708	+		CCNA_03095	0.69	+0.1
3,244,708	+		CCNA_03095	0.69	-0.8
3,244,708	+		CCNA_03095	0.69	-2.0
3,244,708	+		CCNA_03095	0.69	-3.4
3,244,716	-		CCNA_03095	0.70	+3.3
3,244,716	-		CCNA_03095	0.70	-2.0
3,244,716	-		CCNA_03095	0.70	-0.7
3,244,716	-		CCNA_03095	0.70	-1.5
3,244,716	-		CCNA_03095	0.70	-1.4
3,244,730	-		CCNA_03095	0.71	-1.3
3,244,757	+		CCNA_03095	0.74	-1.6
3,244,765	-		CCNA_03095	0.74	-0.0
3,244,771	-		CCNA_03095	0.75	-0.7
3,244,804	+		CCNA_03095	0.78	-0.9
3,244,810	+		CCNA_03095	0.79	+1.0
3,244,812	-		CCNA_03095	0.79	-1.7
3,244,812	-		CCNA_03095	0.79	-0.9
3,244,812	-		CCNA_03095	0.79	+0.5
3,244,888	+		CCNA_03095	0.86	-1.6