Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02994

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
3,145,924	-		CCNA_02993	0.42	-1.3
3,145,929	-		CCNA_02993	0.42	+0.3
3,145,951	-		CCNA_02993	0.44	+3.7
3,145,951	-		CCNA_02993	0.44	+0.8
3,146,022	+		CCNA_02993	0.49	-0.4
3,146,029	+		CCNA_02993	0.50	-0.9
3,146,079	-		CCNA_02993	0.54	+2.0
3,146,154	-		CCNA_02993	0.59	-2.2
3,146,154	-		CCNA_02993	0.59	+1.9
3,146,154	-		CCNA_02993	0.59	+0.4
3,146,184	+		CCNA_02993	0.62	+0.5
3,146,192	-		CCNA_02993	0.62	-0.2
3,146,192	-		CCNA_02993	0.62	-0.1
3,146,197	+		CCNA_02993	0.63	+0.6
3,146,197	+		CCNA_02993	0.63	-1.2
3,146,197	-		CCNA_02993	0.63	+1.4
3,146,250	+		CCNA_02993	0.67	-1.2
3,146,255	+		CCNA_02993	0.67	-1.1
3,146,255	+		CCNA_02993	0.67	-0.5
3,146,255	+		CCNA_02993	0.67	+1.4
3,146,255	+		CCNA_02993	0.67	+0.8
3,146,258	-		CCNA_02993	0.67	+2.7
3,146,258	-		CCNA_02993	0.67	+2.5
3,146,260	+		CCNA_02993	0.68	-1.7
3,146,263	-		CCNA_02993	0.68	+0.7
3,146,263	-		CCNA_02993	0.68	+0.3
3,146,263	-		CCNA_02993	0.68	+0.9
3,146,268	-		CCNA_02993	0.68	+0.1
3,146,268	-		CCNA_02993	0.68	-0.1
3,146,311	+		CCNA_02993	0.71	+1.2
3,146,311	+		CCNA_02993	0.71	-0.9
3,146,362	-		CCNA_02993	0.75	+1.5
3,146,380	-		CCNA_02993	0.77	+0.8
3,146,386	+		CCNA_02993	0.77	+1.4
3,146,389	-		CCNA_02993	0.77	+2.3
3,146,394	-		CCNA_02993	0.78	+1.8
3,146,416	-		CCNA_02993	0.80	+1.8
3,146,446	+		CCNA_02993	0.82	-0.7
3,146,454	-		CCNA_02993	0.83	+1.0
3,146,454	-		CCNA_02993	0.83	+4.4
3,146,475	-		CCNA_02993	0.84	+0.7
3,146,540	+		CCNA_02993	0.89	-1.1
3,146,609	-				-0.2
3,146,634	+				+0.4
3,146,634	+				-2.1
3,146,674	-				+1.3
3,146,738	-				+1.2
3,146,787	-				+2.0
3,146,824	+				+0.1
3,146,832	-				+2.3
3,146,893	-				+2.4
3,150,164	-				+0.8
3,150,276	+				+1.3
3,150,276	+				+0.1
3,150,276	+				+0.1
3,150,276	+				+1.8
3,150,276	+				+3.7
3,150,276	+				+0.4
3,150,276	+				+1.6
3,150,276	+				+0.8
3,150,276	+				-0.6
3,150,276	+				+0.9
3,150,276	+				+0.7
3,150,284	-				+0.0
3,150,284	-				-1.8
3,150,284	-				-1.3
3,150,284	-				-1.7
3,150,284	-				-0.2
3,150,284	-				+0.8
3,150,284	-				-1.1
3,150,284	-				+0.7
3,150,284	-				-1.5
3,150,290	+				+1.1
3,150,290	+				-0.4
3,150,298	-				-0.7
3,150,312	+				-0.7
3,150,331	-				-2.1
3,150,353	+				+1.3
3,150,361	-				-0.8
3,150,364	-				+1.0
3,150,370	+				+0.9
3,150,379	+				+0.0
3,150,381	+				-1.8
3,150,383	+				+0.7
3,150,393	+				+0.4
3,150,393	+				-0.7
3,150,393	+				-1.8
3,150,393	+				+0.5
3,150,393	+				+1.0
3,150,393	+				+0.2
3,150,401	-				+0.8
3,150,401	-				-1.0
3,150,401	-				+1.4
3,150,401	-				-1.0
3,150,401	-				-1.1
3,150,401	-				+1.7
3,150,401	-				+0.5
3,150,401	-				-0.7
3,150,401	-				-1.0
3,150,401	-				-1.6
3,150,401	-				+0.5
3,150,401	-				+0.2
3,150,401	-				-1.8
3,150,401	-				+1.1
3,150,403	-				+0.4
3,150,406	+				-0.1
3,150,406	+				+1.9
3,150,406	+				+1.3
3,150,414	-				+2.0
3,150,414	-				-0.5
3,150,414	-				-0.1
3,150,414	-				-0.8
3,150,471	-				-1.3
3,150,488	+				-0.8
3,150,540	+				-1.0
3,150,546	-				+0.2
3,150,573	-				+0.9
3,150,574	-				+1.1
3,150,575	+				-0.1
3,150,583	-				-0.7
3,150,583	-				+1.1
3,150,583	-				-0.2
3,150,583	-				-0.3
3,150,583	-				+0.6
3,150,583	-				+1.7
3,150,585	+				-0.7
3,150,593	-				-0.9
3,150,593	-				+0.7
3,150,593	-				+1.3
3,150,620	+				-0.2
3,150,644	+				-1.4
3,150,650	-				+0.2
3,150,652	-				+0.6
3,150,678	+				-3.0
3,150,682	+				-1.1
3,150,685	-				-0.2
3,150,685	-				+0.7
3,150,685	-				+0.6
3,150,690	-				+1.6
3,150,737	+		CCNA_02995	0.12	+1.6
3,150,749	-		CCNA_02995	0.14	-0.1
3,150,754	-		CCNA_02995	0.15	+0.7
3,150,754	-				+0.7
3,150,757	+		CCNA_02995	0.15	-1.5
3,150,757	+		CCNA_02995	0.15	+1.4
3,150,765	-		CCNA_02995	0.16	+1.6
3,150,765	-		CCNA_02995	0.16	+0.6
3,150,767	+		CCNA_02995	0.17	-0.9
3,150,776	+		CCNA_02995	0.18	+0.7
3,150,779	-		CCNA_02995	0.18	-1.4
3,150,787	+		CCNA_02995	0.20	+2.6
3,150,795	-		CCNA_02995	0.21	-0.4
3,150,849	+		CCNA_02995	0.29	+1.5
3,150,851	+		CCNA_02995	0.29	+0.2
3,150,867	-		CCNA_02995	0.32	+0.4
3,150,878	+		CCNA_02995	0.33	+1.0
3,150,883	+		CCNA_02995	0.34	+2.1
3,150,888	+		CCNA_02995	0.35	+1.8
3,150,898	+		CCNA_02995	0.37	-1.8
3,150,937	-		CCNA_02995	0.43	-1.3
3,150,946	+		CCNA_02995	0.44	-1.3
3,150,970	-		CCNA_02995	0.48	-0.5
3,150,980	-		CCNA_02995	0.49	+0.5
3,150,986	+		CCNA_02995	0.50	-1.2
3,150,994	-		CCNA_02995	0.51	+0.0
3,151,027	+		CCNA_02995	0.56	-0.4
3,151,027	+		CCNA_02995	0.56	+1.1
3,151,027	+		CCNA_02995	0.56	-1.6
3,151,027	+		CCNA_02995	0.56	-1.2
3,151,027	+		CCNA_02995	0.56	-0.1
3,151,027	+		CCNA_02995	0.56	-0.3
3,151,027	+		CCNA_02995	0.56	-1.5
3,151,027	+		CCNA_02995	0.56	+0.7
3,151,030	-		CCNA_02995	0.57	+1.1
3,151,035	-		CCNA_02995	0.57	-1.9
3,151,035	-		CCNA_02995	0.57	+0.3
3,151,035	-		CCNA_02995	0.57	-1.5
3,151,035	-		CCNA_02995	0.57	-2.2
3,151,035	-		CCNA_02995	0.57	-1.8
3,151,035	-		CCNA_02995	0.57	+0.7
3,151,035	-		CCNA_02995	0.57	-2.6
3,151,040	-		CCNA_02995	0.58	-0.7
3,151,048	+		CCNA_02995	0.59	-1.6
3,151,048	+		CCNA_02995	0.59	+1.0
3,151,048	+		CCNA_02995	0.59	-0.6
3,151,048	+		CCNA_02995	0.59	+1.3
3,151,048	+		CCNA_02995	0.59	-1.5
3,151,048	+		CCNA_02995	0.59	+1.4
3,151,048	+		CCNA_02995	0.59	-1.2
3,151,048	+		CCNA_02995	0.59	-1.6
3,151,048	+		CCNA_02995	0.59	-1.1
3,151,056	-		CCNA_02995	0.61	+0.9
3,151,056	-		CCNA_02995	0.61	-0.5
3,151,056	-		CCNA_02995	0.61	-0.2
3,151,056	-		CCNA_02995	0.61	-2.0
3,151,056	-		CCNA_02995	0.61	-1.7
3,151,067	-		CCNA_02995	0.62	+0.1
3,151,087	+		CCNA_02995	0.65	-0.3
3,151,113	+		CCNA_02995	0.69	+0.1
3,151,118	-		CCNA_02995	0.70	-2.3