Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02782

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
2,938,969	-		CCNA_02780	0.53	-0.5
2,939,017	+		CCNA_02780	0.59	-1.4
2,939,026	+		CCNA_02780	0.60	+1.2
2,939,070	-		CCNA_02780	0.66	-1.4
2,939,088	+		CCNA_02780	0.68	-0.8
2,939,093	+		CCNA_02780	0.68	-1.2
2,939,096	+		CCNA_02780	0.69	-0.9
2,939,121	+		CCNA_02780	0.72	-0.5
2,939,129	+		CCNA_02780	0.73	-0.7
2,939,129	+		CCNA_02780	0.73	-0.8
2,939,129	+		CCNA_02780	0.73	-1.7
2,939,129	-		CCNA_02780	0.73	-1.8
2,939,137	-		CCNA_02780	0.74	-0.6
2,939,149	+		CCNA_02780	0.76	-1.9
2,939,149	+		CCNA_02780	0.76	-0.6
2,939,157	-		CCNA_02780	0.77	-1.0
2,939,182	+		CCNA_02780	0.80	-0.7
2,939,182	+		CCNA_02780	0.80	-0.7
2,939,182	+		CCNA_02780	0.80	+0.3
2,939,182	+		CCNA_02780	0.80	+2.0
2,939,182	+		CCNA_02780	0.80	+0.3
2,939,182	+		CCNA_02780	0.80	+1.1
2,939,182	+		CCNA_02780	0.80	+1.3
2,939,182	+		CCNA_02780	0.80	+0.2
2,939,182	+		CCNA_02780	0.80	+0.0
2,939,190	-		CCNA_02780	0.81	+1.1
2,939,190	-		CCNA_02780	0.81	-0.9
2,939,190	-		CCNA_02780	0.81	-1.2
2,939,190	-		CCNA_02780	0.81	-0.4
2,939,190	-		CCNA_02780	0.81	-2.1
2,939,190	-		CCNA_02780	0.81	+0.3
2,939,190	-		CCNA_02780	0.81	-1.5
2,939,190	-		CCNA_02780	0.81	-1.6
2,939,190	-		CCNA_02780	0.81	-0.8
2,939,190	-		CCNA_02780	0.81	-1.1
2,939,190	-		CCNA_02780	0.81	-2.0
2,939,190	-		CCNA_02780	0.81	-1.6
2,939,190	-		CCNA_02780	0.81	-2.1
2,939,190	-		CCNA_02780	0.81	-2.6
2,939,190	-		CCNA_02780	0.81	-1.3
2,939,228	+		CCNA_02780	0.86	-0.9
2,939,228	+		CCNA_02780	0.86	-0.6
2,939,262	-				+0.8
2,939,266	+				-2.5
2,939,267	-				-0.6
2,939,287	+				-0.2
2,939,297	+				-1.7
2,939,297	+				-0.7
2,939,297	+				+2.5
2,939,297	+				+0.0
2,939,297	+				-1.6
2,939,297	+				-0.6
2,939,305	-				+0.0
2,939,311	+				+1.8
2,939,341	+				+0.7
2,939,346	+				+0.8
2,939,346	+				-0.2
2,939,346	+				+1.2
2,939,354	-				-0.6
2,939,375	+				-1.9
2,939,390	+				-0.6
2,939,398	-				-1.9
2,939,428	-		CCNA_02781	0.13	-0.5
2,939,444	+		CCNA_02781	0.16	+1.0
2,939,454	+		CCNA_02781	0.17	+3.8
2,939,462	-		CCNA_02781	0.19	-0.1
2,939,479	+		CCNA_02781	0.22	+2.4
2,939,485	-		CCNA_02781	0.23	+1.3
2,939,494	+		CCNA_02781	0.24	+0.2
2,939,513	+		CCNA_02781	0.27	-1.5
2,939,513	+		CCNA_02781	0.27	+0.3
2,939,513	+		CCNA_02781	0.27	-0.4
2,939,513	+		CCNA_02781	0.27	-0.2
2,939,513	+		CCNA_02781	0.27	-1.8
2,939,513	+		CCNA_02781	0.27	-0.2
2,939,513	+		CCNA_02781	0.27	-1.1
2,939,513	+		CCNA_02781	0.27	-1.3
2,939,518	+		CCNA_02781	0.28	+3.0
2,939,521	-		CCNA_02781	0.29	-1.9
2,939,521	-		CCNA_02781	0.29	-0.7
2,939,541	-		CCNA_02781	0.32	-1.7
2,939,548	-		CCNA_02781	0.33	+0.2
2,939,572	+		CCNA_02781	0.37	-0.7
2,939,580	+		CCNA_02781	0.39	-0.8
2,939,582	+		CCNA_02781	0.39	+0.8
2,939,588	-		CCNA_02781	0.40	+1.1
2,939,588	-		CCNA_02781	0.40	+1.9
2,939,591	-		CCNA_02781	0.40	-1.0
2,939,609	+		CCNA_02781	0.43	-0.7
2,939,632	+		CCNA_02781	0.47	-0.9
2,939,633	+		CCNA_02781	0.47	+0.1
2,939,633	+		CCNA_02781	0.47	-1.1
2,939,669	+		CCNA_02781	0.53	-1.2
2,939,716	-		CCNA_02781	0.61	-0.7
2,939,748	+		CCNA_02781	0.67	-1.7
2,939,751	-		CCNA_02781	0.67	-1.1
2,939,790	+		CCNA_02781	0.74	-1.0
2,939,821	+		CCNA_02781	0.79	-1.0
2,939,832	+		CCNA_02781	0.81	+1.3
2,939,832	+		CCNA_02781	0.81	-0.9
2,939,855	-		CCNA_02781	0.85	-1.3
2,939,884	+		CCNA_02781	0.89	+3.2
2,939,892	-				-1.4
2,939,893	-				-1.6
2,939,908	+				-1.6
2,939,915	+				-0.2
2,939,916	-				-2.4
2,939,923	-				-1.9
2,939,925	+				-1.1
2,939,953	-				-1.6
2,939,954	-				-2.6
2,939,966	+				+0.5
2,939,982	+				-1.7
2,939,982	+				-0.3
2,940,003	+				-0.3
2,940,003	+				-1.3
2,940,003	+				-0.1
2,940,003	+				-0.3
2,940,003	+				-0.1
2,940,011	-				-1.6
2,940,013	+				-2.2
2,940,013	+				+0.6
2,940,013	+				+0.0
2,940,021	-		CCNA_02782	0.11	-2.5
2,940,027	-		CCNA_02782	0.12	-0.3
2,940,035	+		CCNA_02782	0.14	-0.9
2,940,035	+		CCNA_02782	0.14	+2.7
2,940,035	+		CCNA_02782	0.14	+0.6
2,940,038	-		CCNA_02782	0.14	+0.0
2,940,072	-		CCNA_02782	0.21	-1.3
2,940,106	-		CCNA_02782	0.28	+1.0
2,940,119	+		CCNA_02782	0.31	-0.9
2,940,119	+		CCNA_02782	0.31	-0.8
2,940,134	+		CCNA_02782	0.34	+0.3
2,940,142	-		CCNA_02782	0.36	+1.4
2,940,142	-		CCNA_02782	0.36	+0.4
2,940,153	+		CCNA_02782	0.38	-2.3
2,940,158	+		CCNA_02782	0.39	+1.5
2,940,210	+		CCNA_02782	0.50	+2.2
2,940,210	+		CCNA_02782	0.50	+2.0
2,940,211	+		CCNA_02782	0.50	+1.7
2,940,211	+		CCNA_02782	0.50	+1.8
2,940,219	-		CCNA_02782	0.51	-0.9
2,940,239	-		CCNA_02782	0.56	-0.4
2,940,271	+		CCNA_02782	0.62	+0.7
2,940,271	+		CCNA_02782	0.62	-1.0
2,940,328	+		CCNA_02782	0.74	-0.4
2,940,346	+		CCNA_02782	0.78	+0.8
2,940,346	+		CCNA_02782	0.78	+1.7
2,940,346	+		CCNA_02782	0.78	+0.9
2,940,346	+		CCNA_02782	0.78	+1.3
2,940,349	-		CCNA_02782	0.78	-0.1
2,940,354	-		CCNA_02782	0.79	+0.5
2,940,386	+		CCNA_02782	0.86	+1.1
2,940,394	-		CCNA_02782	0.87	-0.5
2,940,394	-		CCNA_02782	0.87	+0.0
2,940,394	-		CCNA_02782	0.87	+1.1
2,940,476	+				+4.8
2,940,494	-				-2.2
2,940,495	+				+2.7
2,940,495	+				+3.5
2,940,497	+				+3.0
2,940,497	+				+2.8
2,940,503	-				-1.6
2,940,503	-				-1.6
2,940,505	-				-1.9
2,940,505	-				-1.4
2,940,614	+				+1.3
2,940,619	+				+0.5
2,940,619	+				-0.9
2,940,622	-				+3.1
2,940,622	-				+3.7
2,940,622	-				+0.3
2,940,637	-				+1.5
2,940,654	-				+3.6
2,940,655	-				+2.7
2,940,696	+				-0.9
2,940,720	-				-2.8
2,940,747	+				+2.7
2,940,747	+				+3.0
2,940,757	+				-1.2
2,940,803	-				+1.7
2,940,840	+				+0.2
2,940,875	-				-1.7
2,940,899	+				-0.6
2,940,909	+				-0.6
2,940,909	+				-2.5
2,940,909	+				-0.9
2,940,914	+				+0.2
2,940,914	+				-0.3
2,940,914	+				+1.3
2,940,917	-				-1.1
2,940,917	-				+0.0
2,940,922	-		CCNA_02783	0.10	+0.2
2,940,922	-		CCNA_02783	0.10	-2.0
2,940,922	-		CCNA_02783	0.10	-0.9
2,940,922	-		CCNA_02783	0.10	-1.2
2,940,924	+		CCNA_02783	0.10	-0.2
2,940,968	+		CCNA_02783	0.13	-1.8
2,940,969	+		CCNA_02783	0.13	+0.3
2,941,006	+				+0.3
2,941,066	+		CCNA_02783	0.20	-0.6
2,941,066	+		CCNA_02783	0.20	+0.5
2,941,074	-		CCNA_02783	0.20	+1.3
2,941,074	-		CCNA_02783	0.20	+0.9
2,941,074	-		CCNA_02783	0.20	-0.1
2,941,080	+		CCNA_02783	0.21	+0.0
2,941,094	+		CCNA_02783	0.22	-0.4
2,941,097	-		CCNA_02783	0.22	-1.7
2,941,100	+		CCNA_02783	0.22	-1.2
2,941,115	-		CCNA_02783	0.23	-1.6
2,941,141	+		CCNA_02783	0.25	-0.7
2,941,154	-		CCNA_02783	0.25	-1.7
2,941,158	+		CCNA_02783	0.26	-2.1
2,941,166	-		CCNA_02783	0.26	+1.0
2,941,202	-		CCNA_02783	0.29	-1.6
2,941,217	+		CCNA_02783	0.30	+0.4
2,941,235	-		CCNA_02783	0.31	-1.9
2,941,248	-		CCNA_02783	0.32	+2.3
2,941,253	-		CCNA_02783	0.32	+3.5
2,941,289	+		CCNA_02783	0.34	-0.2
2,941,297	-		CCNA_02783	0.35	-1.4
2,941,315	+		CCNA_02783	0.36	+3.8
2,941,339	-		CCNA_02783	0.38	+0.3
2,941,339	-		CCNA_02783	0.38	+0.3
2,941,358	+		CCNA_02783	0.39	-0.7
2,941,379	-		CCNA_02783	0.40	-1.0
2,941,392	-		CCNA_02783	0.41	-0.1
2,941,392	-		CCNA_02783	0.41	+1.6
2,941,402	-		CCNA_02783	0.42	-0.6
2,941,411	+		CCNA_02783	0.42	+0.8
2,941,411	+		CCNA_02783	0.42	-1.6
2,941,415	-		CCNA_02783	0.43	-0.4
2,941,419	-		CCNA_02783	0.43	-0.1
2,941,428	+		CCNA_02783	0.43	+2.5
2,941,428	+		CCNA_02783	0.43	+1.1
2,941,428	+		CCNA_02783	0.43	-0.1
2,941,436	-		CCNA_02783	0.44	-1.3
2,941,436	-		CCNA_02783	0.44	-1.6
2,941,436	-		CCNA_02783	0.44	+0.0
2,941,444	+		CCNA_02783	0.44	-1.1
2,941,448	+		CCNA_02783	0.45	+0.2
2,941,452	-		CCNA_02783	0.45	-1.4