Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02662

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
2,814,741	+				+4.6
2,814,751	-		CCNA_02661	0.67	+1.2
2,814,771	-		CCNA_02661	0.68	+0.3
2,814,799	+		CCNA_02661	0.69	+0.8
2,814,799	+		CCNA_02661	0.69	+1.9
2,814,807	-		CCNA_02661	0.69	+0.6
2,814,807	-		CCNA_02661	0.69	+0.5
2,814,825	-		CCNA_02661	0.70	-0.3
2,814,844	-		CCNA_02661	0.71	-0.7
2,814,844	-		CCNA_02661	0.71	+1.4
2,814,869	+		CCNA_02661	0.71	+1.1
2,814,901	+		CCNA_02661	0.73	-0.5
2,814,901	+		CCNA_02661	0.73	+1.3
2,814,942	-		CCNA_02661	0.74	-0.3
2,814,954	+		CCNA_02661	0.75	+0.6
2,814,988	-		CCNA_02661	0.76	+0.9
2,814,997	+		CCNA_02661	0.76	+1.4
2,814,997	+		CCNA_02661	0.76	-0.1
2,815,003	+		CCNA_02661	0.76	+0.8
2,815,005	-		CCNA_02661	0.76	+0.2
2,815,005	-		CCNA_02661	0.76	-1.2
2,815,005	-		CCNA_02661	0.76	-0.6
2,815,005	-		CCNA_02661	0.76	+0.4
2,815,030	+		CCNA_02661	0.77	-0.9
2,815,038	-		CCNA_02661	0.77	+0.5
2,815,069	-		CCNA_02661	0.79	+2.1
2,815,103	-		CCNA_02661	0.80	-0.1
2,815,108	+		CCNA_02661	0.80	+2.2
2,815,141	+		CCNA_02661	0.81	+1.7
2,815,204	+		CCNA_02661	0.83	-0.2
2,815,253	+		CCNA_02661	0.85	+2.1
2,815,258	+		CCNA_02661	0.85	+1.5
2,815,266	-		CCNA_02661	0.86	-0.8
2,815,266	-		CCNA_02661	0.86	-0.9
2,815,272	+		CCNA_02661	0.86	+2.0
2,815,322	+		CCNA_02661	0.88	-0.4
2,815,367	-		CCNA_02661	0.89	+1.0
2,815,376	+		CCNA_02661	0.90	+0.3
2,815,376	+		CCNA_02661	0.90	+0.8
2,815,376	+		CCNA_02661	0.90	+2.2
2,815,376	+		CCNA_02661	0.90	+1.4
2,815,376	+		CCNA_02661	0.90	+2.1
2,815,384	-		CCNA_02661	0.90	+0.6
2,815,384	-		CCNA_02661	0.90	-1.4
2,815,384	-		CCNA_02661	0.90	+0.5
2,815,386	+		CCNA_02661	0.90	+1.3
2,815,386	+		CCNA_02661	0.90	+0.8
2,815,393	-				-0.9
2,815,394	-				+0.7
2,815,394	-				-0.4
2,815,412	+				+1.8
2,815,412	+				+1.4
2,815,418	+				+2.0
2,815,458	+				+2.5
2,815,458	+				+2.4
2,815,481	+				+2.2
2,815,501	+				+1.8
2,815,522	-				+1.6
2,815,567	+				+2.9
2,815,567	+				+2.8
2,815,572	+				+1.9
2,815,575	-				+0.6
2,815,575	-				-0.4
2,815,591	+				+1.8
2,815,599	-				-0.7
2,815,609	+				+2.3
2,815,609	+				+2.8
2,815,617	-				+1.0
2,815,617	-				+0.5
2,815,623	+				+2.1
2,815,623	-				+1.9
2,815,647	-				+1.1
2,815,647	-				+0.6
2,815,654	-				+1.6
2,815,695	+				+1.3
2,815,726	-				+1.4
2,815,857	+				+0.7
2,815,868	+				+0.5
2,815,868	+				+2.4
2,815,875	+				+2.6
2,815,875	+				-1.2
2,815,875	+				+0.4
2,815,947	-		CCNA_02662	0.14	+0.1
2,815,947	-		CCNA_02662	0.14	+3.1
2,815,974	+		CCNA_02662	0.16	+0.9
2,815,974	+		CCNA_02662	0.16	-0.2
2,815,979	+		CCNA_02662	0.16	+2.9
2,815,979	+		CCNA_02662	0.16	+0.1
2,815,981	-		CCNA_02662	0.16	+0.8
2,815,982	-		CCNA_02662	0.16	+0.6
2,815,987	-		CCNA_02662	0.16	+1.4
2,815,987	-		CCNA_02662	0.16	+0.8
2,815,987	-		CCNA_02662	0.16	+2.3
2,816,024	+		CCNA_02662	0.19	-0.0
2,816,044	+		CCNA_02662	0.20	+0.0
2,816,052	-		CCNA_02662	0.20	+0.2
2,816,081	+		CCNA_02662	0.22	-1.6
2,816,091	+		CCNA_02662	0.23	+1.9
2,816,092	-		CCNA_02662	0.23	+1.6
2,816,132	+		CCNA_02662	0.25	-1.4
2,816,132	+		CCNA_02662	0.25	-0.3
2,816,140	-		CCNA_02662	0.26	+2.1
2,816,209	+		CCNA_02662	0.30	-3.2
2,816,226	+		CCNA_02662	0.31	+1.7
2,816,286	-		CCNA_02662	0.35	+1.7
2,816,383	+		CCNA_02662	0.41	-1.0
2,816,388	+		CCNA_02662	0.41	-0.6
2,816,391	-		CCNA_02662	0.42	+1.1
2,816,419	-		CCNA_02662	0.43	+1.8
2,816,496	+		CCNA_02662	0.48	+1.7
2,816,512	-		CCNA_02662	0.49	-1.9
2,816,529	-		CCNA_02662	0.50	+1.7
2,816,679	-		CCNA_02662	0.60	+0.5
2,816,694	+		CCNA_02662	0.60	-1.6
2,816,694	+		CCNA_02662	0.60	+0.8
2,816,732	-		CCNA_02662	0.63	+1.5
2,816,746	-		CCNA_02662	0.64	+2.1
2,816,772	-		CCNA_02662	0.65	+1.3
2,816,783	-		CCNA_02662	0.66	+3.0
2,816,846	+		CCNA_02662	0.70	-1.8
2,816,847	-		CCNA_02662	0.70	+1.7
2,816,865	+		CCNA_02662	0.71	-2.6
2,816,873	-		CCNA_02662	0.72	+2.1
2,816,873	-		CCNA_02662	0.72	+0.7
2,816,905	+		CCNA_02662	0.74	+2.5
2,816,910	+		CCNA_02662	0.74	-0.0
2,816,911	+		CCNA_02662	0.74	-0.4
2,816,913	-		CCNA_02662	0.74	+0.2
2,816,913	-		CCNA_02662	0.74	+1.3
2,816,913	-		CCNA_02662	0.74	+1.0
2,816,913	-		CCNA_02662	0.74	+2.3
2,816,918	-		CCNA_02662	0.74	+2.4
2,816,926	+		CCNA_02662	0.75	+0.1
2,816,948	+		CCNA_02662	0.76	-0.4
2,816,956	-		CCNA_02662	0.77	+1.9
2,816,958	-		CCNA_02662	0.77	+1.1
2,817,016	+		CCNA_02662	0.81	-0.4
2,817,017	+		CCNA_02662	0.81	-1.1
2,817,027	+		CCNA_02662	0.81	-1.0
2,817,035	-		CCNA_02662	0.82	+0.9
2,817,047	+		CCNA_02662	0.82	+0.1
2,817,047	+				+1.3
2,817,055	+		CCNA_02662	0.83	+0.1
2,817,055	-		CCNA_02662	0.83	+2.2
2,817,097	-		CCNA_02662	0.86	+0.7
2,817,154	+		CCNA_02662	0.89	+1.6
2,817,162	-		CCNA_02662	0.90	+0.3
2,817,162	-		CCNA_02662	0.90	+1.6
2,817,162	-		CCNA_02662	0.90	+2.9
2,817,167	+				-1.1
2,817,206	+				-2.2
2,817,206	+				+1.0
2,817,206	+				-1.8
2,817,207	-				+1.2
2,817,214	-				+1.3
2,817,233	+				+0.1
2,817,241	+				-0.4
2,817,241	+				-1.2
2,817,249	-				+1.7
2,817,292	+				+1.4
2,817,354	+				+1.2
2,817,354	+				-1.6
2,817,367	-				-1.4
2,817,387	+				+0.3
2,817,395	-				+2.0
2,817,395	-				+1.7
2,817,409	-				+2.9
2,817,409	-				+2.6
2,817,442	+				-2.1
2,817,455	-				+3.6
2,817,503	-		CCNA_02663	0.11	-2.8
2,817,603	+		CCNA_02663	0.34	-1.5
2,817,611	-		CCNA_02663	0.36	+0.1
2,817,657	+		CCNA_02663	0.47	-0.6
2,817,660	-		CCNA_02663	0.48	+0.2
2,817,667	-		CCNA_02663	0.49	-0.6
2,817,676	+		CCNA_02663	0.51	-0.8
2,817,686	+		CCNA_02663	0.54	-2.2
2,817,900	+				-1.3
2,817,906	-				+2.0
2,817,933	+				-0.6
2,817,966	-				-0.4
2,818,022	+				-0.2
2,818,027	+				-0.5
2,818,027	+				+1.2
2,818,027	+				-0.5
2,818,030	-				+1.9
2,818,080	-				+2.0
2,818,106	-				-0.5
2,818,106	-				+0.8
2,818,106	-				+2.2
2,818,108	+				-1.1
2,818,133	-				+0.8
2,818,153	+		CCNA_02664	0.13	-0.9
2,818,187	+		CCNA_02664	0.21	-2.0
2,818,252	+		CCNA_02664	0.36	-0.2
2,818,265	-		CCNA_02664	0.39	+1.6