Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02606

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
2,750,246	+		CCNA_02604	0.82	-1.0
2,750,246	+		CCNA_02604	0.82	-1.4
2,750,264	-		CCNA_02604	0.87	-1.4
2,750,298	+				-0.0
2,750,300	-				+0.9
2,750,306	-				+0.2
2,750,306	-				+0.1
2,750,314	-				+3.4
2,750,353	-				-1.4
2,750,359	+				+0.6
2,750,409	+				-2.4
2,750,409	+				-0.8
2,750,409	+				-0.7
2,750,409	+				-1.0
2,750,409	+				-1.5
2,750,409	+				-1.1
2,750,417	-				-1.4
2,750,417	-				+1.2
2,750,417	-				-1.8
2,750,417	-				-0.6
2,750,417	-				+0.1
2,750,417	-				+0.0
2,750,417	-				+0.9
2,750,425	+				-1.7
2,750,425	+				-1.0
2,750,433	-				+0.8
2,750,433	-				-0.1
2,750,446	-				+1.4
2,750,451	-				+1.7
2,750,460	+				+0.6
2,750,460	+				-0.4
2,750,475	-				-1.3
2,750,515	-		CCNA_02605	0.13	+0.5
2,750,515	-		CCNA_02605	0.13	-0.5
2,750,515	-		CCNA_02605	0.13	-0.5
2,750,517	+		CCNA_02605	0.13	-2.2
2,750,525	-		CCNA_02605	0.14	+0.8
2,750,525	-		CCNA_02605	0.14	-0.2
2,750,556	+		CCNA_02605	0.18	-0.5
2,750,586	+		CCNA_02605	0.22	-1.0
2,750,611	+		CCNA_02605	0.25	+0.1
2,750,611	+		CCNA_02605	0.25	-1.3
2,750,619	-		CCNA_02605	0.26	+0.9
2,750,712	-		CCNA_02605	0.38	+0.3
2,750,727	+		CCNA_02605	0.40	-2.5
2,750,745	-		CCNA_02605	0.42	+0.5
2,750,745	-		CCNA_02605	0.42	+0.2
2,750,772	+		CCNA_02605	0.45	-1.1
2,750,791	+		CCNA_02605	0.48	+1.7
2,750,799	-		CCNA_02605	0.49	+1.0
2,750,799	-		CCNA_02605	0.49	+1.0
2,750,817	+		CCNA_02605	0.51	-0.6
2,750,817	+		CCNA_02605	0.51	+0.1
2,750,844	-		CCNA_02605	0.55	+1.1
2,750,862	+		CCNA_02605	0.57	+0.6
2,750,862	+		CCNA_02605	0.57	+1.1
2,750,862	+		CCNA_02605	0.57	+0.1
2,750,870	-		CCNA_02605	0.58	+1.0
2,750,870	-		CCNA_02605	0.58	+0.1
2,750,874	+		CCNA_02605	0.58	+1.1
2,750,914	-		CCNA_02605	0.63	+1.1
2,750,950	+		CCNA_02605	0.68	-0.2
2,750,950	+		CCNA_02605	0.68	-1.8
2,750,958	-		CCNA_02605	0.69	+0.6
2,750,958	-		CCNA_02605	0.69	-0.3
2,750,969	-		CCNA_02605	0.70	-0.1
2,751,017	-		CCNA_02605	0.76	+1.2
2,751,034	+		CCNA_02605	0.79	-3.0
2,751,034	+		CCNA_02605	0.79	-0.1
2,751,066	-		CCNA_02605	0.83	+1.2
2,751,106	-		CCNA_02605	0.88	-0.2
2,751,116	-		CCNA_02605	0.89	-0.5
2,751,123	-		CCNA_02605	0.90	-0.2
2,751,140	-				+1.7
2,751,154	-				+0.1
2,751,154	-				+0.7
2,751,161	+				-0.9
2,751,169	-				+1.6
2,751,169	-				-1.5
2,751,171	+				-0.9
2,751,179	-				+1.9
2,751,181	+				-0.8
2,751,181	+				-2.0
2,751,189	-				-0.0
2,751,217	-				+1.4
2,751,262	-				+0.1
2,751,264	-				-0.5
2,751,289	-				+0.3
2,751,294	-				+0.9
2,751,301	+				-0.6
2,751,311	+				-1.8
2,751,313	-				+2.4
2,751,314	-				-1.5
2,751,350	-				-2.6
2,751,435	-				+2.8
2,751,465	+				+0.6
2,751,465	+				-1.3
2,751,475	+				-1.1
2,751,475	+				-1.7
2,751,491	+				+1.4
2,751,491	+				+0.0
2,751,499	-		CCNA_02606	0.10	+2.3
2,751,500	+		CCNA_02606	0.10	-0.5
2,751,501	+		CCNA_02606	0.10	-1.9
2,751,509	-		CCNA_02606	0.10	-1.5
2,751,509	-		CCNA_02606	0.10	-1.5
2,751,520	+		CCNA_02606	0.11	-1.8
2,751,524	+		CCNA_02606	0.11	-0.8
2,751,528	-		CCNA_02606	0.11	-0.7
2,751,536	+		CCNA_02606	0.12	+0.8
2,751,539	-		CCNA_02606	0.12	-0.1
2,751,544	-		CCNA_02606	0.12	-2.1
2,751,549	-		CCNA_02606	0.12	-1.7
2,751,551	+		CCNA_02606	0.12	-1.0
2,751,571	+		CCNA_02606	0.13	+0.4
2,751,571	+		CCNA_02606	0.13	+1.4
2,751,571	+		CCNA_02606	0.13	-1.3
2,751,571	+				+0.6
2,751,572	-		CCNA_02606	0.13	-0.4
2,751,579	-		CCNA_02606	0.13	+0.2
2,751,579	-		CCNA_02606	0.13	-1.5
2,751,583	+		CCNA_02606	0.13	+0.5
2,751,639	+		CCNA_02606	0.16	+4.5
2,751,658	-		CCNA_02606	0.16	+0.6
2,751,662	+		CCNA_02606	0.17	-0.4
2,751,680	-		CCNA_02606	0.17	-1.2
2,751,705	+		CCNA_02606	0.18	+0.1
2,751,718	-		CCNA_02606	0.19	+0.4
2,751,748	+		CCNA_02606	0.20	-1.6
2,751,753	+		CCNA_02606	0.20	-0.5
2,751,756	-		CCNA_02606	0.20	+0.3
2,751,758	+		CCNA_02606	0.20	-1.2
2,751,761	-		CCNA_02606	0.20	+0.1
2,751,776	+		CCNA_02606	0.21	+0.2
2,751,777	+		CCNA_02606	0.21	+0.5
2,751,777	+		CCNA_02606	0.21	-3.4
2,751,784	-		CCNA_02606	0.21	-1.2
2,751,784	-		CCNA_02606	0.21	-1.7
2,751,785	-		CCNA_02606	0.21	-0.4
2,751,860	+		CCNA_02606	0.24	-0.7
2,751,867	+		CCNA_02606	0.25	+0.8
2,751,867	+		CCNA_02606	0.25	-2.0
2,751,867	+		CCNA_02606	0.25	-0.8
2,751,867	+		CCNA_02606	0.25	-0.2
2,751,867	+		CCNA_02606	0.25	+0.5
2,751,867	+		CCNA_02606	0.25	-0.4
2,751,875	-		CCNA_02606	0.25	-1.7
2,751,875	-		CCNA_02606	0.25	+0.0
2,751,875	-		CCNA_02606	0.25	-0.9
2,751,875	-		CCNA_02606	0.25	+0.6
2,751,875	-		CCNA_02606	0.25	-1.9
2,751,931	+		CCNA_02606	0.27	-1.7
2,751,956	-		CCNA_02606	0.28	-2.8
2,751,980	+		CCNA_02606	0.29	-1.3
2,751,988	-		CCNA_02606	0.29	-1.2
2,752,034	+		CCNA_02606	0.31	-2.5
2,752,037	-		CCNA_02606	0.31	+0.0
2,752,039	+		CCNA_02606	0.31	+0.3
2,752,063	+		CCNA_02606	0.32	-1.0
2,752,065	-		CCNA_02606	0.33	-1.5
2,752,071	-		CCNA_02606	0.33	-1.6
2,752,090	+		CCNA_02606	0.33	-1.7
2,752,096	+		CCNA_02606	0.34	+0.2
2,752,098	-		CCNA_02606	0.34	-1.8
2,752,098	-		CCNA_02606	0.34	-0.2
2,752,104	-		CCNA_02606	0.34	+0.1
2,752,104	-		CCNA_02606	0.34	-0.9
2,752,124	+		CCNA_02606	0.35	+0.1
2,752,136	+		CCNA_02606	0.35	+0.6
2,752,137	-		CCNA_02606	0.35	-2.0
2,752,143	-		CCNA_02606	0.36	-1.9
2,752,153	-		CCNA_02606	0.36	+1.7
2,752,164	-		CCNA_02606	0.36	-0.4
2,752,164	-		CCNA_02606	0.36	-1.4
2,752,166	+		CCNA_02606	0.37	-1.6
2,752,166	+		CCNA_02606	0.37	+1.4
2,752,166	+		CCNA_02606	0.37	-1.7
2,752,166	+		CCNA_02606	0.37	+2.3
2,752,166	+		CCNA_02606	0.37	-0.1
2,752,174	-		CCNA_02606	0.37	+0.3
2,752,174	-		CCNA_02606	0.37	-0.7
2,752,174	-		CCNA_02606	0.37	+0.8
2,752,174	-		CCNA_02606	0.37	-0.0
2,752,174	-		CCNA_02606	0.37	+0.9
2,752,174	-		CCNA_02606	0.37	-0.9
2,752,212	+		CCNA_02606	0.38	-0.2
2,752,212	+		CCNA_02606	0.38	-2.1
2,752,213	+		CCNA_02606	0.38	-3.3
2,752,241	+		CCNA_02606	0.39	+0.6
2,752,241	+		CCNA_02606	0.39	-1.5
2,752,258	-		CCNA_02606	0.40	-1.4
2,752,265	+		CCNA_02606	0.40	-2.3
2,752,290	+		CCNA_02606	0.41	-2.7
2,752,290	+		CCNA_02606	0.41	-1.2
2,752,290	+		CCNA_02606	0.41	-2.5
2,752,298	-		CCNA_02606	0.42	-1.9
2,752,307	+		CCNA_02606	0.42	-0.7
2,752,315	-		CCNA_02606	0.42	-1.0
2,752,332	-		CCNA_02606	0.43	-1.6
2,752,336	+		CCNA_02606	0.43	+0.1
2,752,384	-		CCNA_02606	0.45	-1.2
2,752,388	+		CCNA_02606	0.45	-1.7
2,752,446	-		CCNA_02606	0.48	-0.9
2,752,455	+		CCNA_02606	0.48	-1.9
2,752,526	-		CCNA_02606	0.51	-0.7
2,752,551	-		CCNA_02606	0.52	-2.5
2,752,552	-		CCNA_02606	0.52	-0.7
2,752,555	-		CCNA_02606	0.52	-1.6
2,752,566	-		CCNA_02606	0.52	-1.2
2,752,610	+		CCNA_02606	0.54	-2.6
2,752,741	-		CCNA_02606	0.59	-1.3
2,752,741	-		CCNA_02606	0.59	+1.3
2,752,754	+		CCNA_02606	0.60	-0.4
2,752,762	-		CCNA_02606	0.60	+0.5
2,752,764	+		CCNA_02606	0.60	-1.6
2,752,798	+		CCNA_02606	0.62	-0.9
2,752,820	-		CCNA_02606	0.62	-1.1
2,752,820	-		CCNA_02606	0.62	+1.7
2,752,858	+		CCNA_02606	0.64	+2.3
2,752,858	+		CCNA_02606	0.64	+2.2
2,752,858	+		CCNA_02606	0.64	+2.2
2,752,864	+		CCNA_02606	0.64	-0.2
2,752,931	+		CCNA_02606	0.67	-1.0
2,752,936	-				+1.9
2,752,939	-		CCNA_02606	0.67	+1.3
2,752,949	+		CCNA_02606	0.68	-1.7
2,752,954	+		CCNA_02606	0.68	-0.8
2,752,961	-		CCNA_02606	0.68	-2.1
2,752,966	+		CCNA_02606	0.68	-2.6
2,752,966	+		CCNA_02606	0.68	-0.4
2,752,966	+		CCNA_02606	0.68	-1.8
2,752,971	+		CCNA_02606	0.68	-0.1
2,752,974	-		CCNA_02606	0.69	-2.9
2,753,023	-		CCNA_02606	0.71	+3.8
2,753,030	+		CCNA_02606	0.71	-2.0
2,753,030	+		CCNA_02606	0.71	-1.7
2,753,038	-		CCNA_02606	0.71	+0.1
2,753,038	-		CCNA_02606	0.71	-1.9
2,753,059	-		CCNA_02606	0.72	-1.5
2,753,061	+		CCNA_02606	0.72	+0.3
2,753,072	+		CCNA_02606	0.72	+0.9
2,753,093	+		CCNA_02606	0.73	-1.8
2,753,094	+		CCNA_02606	0.73	-1.2
2,753,102	-		CCNA_02606	0.74	-2.2
2,753,119	+		CCNA_02606	0.74	-0.2
2,753,122	-		CCNA_02606	0.74	+3.1
2,753,127	-		CCNA_02606	0.75	+0.5
2,753,180	+		CCNA_02606	0.77	-0.8
2,753,180	+		CCNA_02606	0.77	-0.1
2,753,198	-		CCNA_02606	0.77	+1.6
2,753,199	+		CCNA_02606	0.78	-2.7
2,753,215	+		CCNA_02606	0.78	-1.8
2,753,246	-		CCNA_02606	0.79	-0.8
2,753,246	-		CCNA_02606	0.79	-1.5
2,753,283	+		CCNA_02606	0.81	-2.4
2,753,284	+		CCNA_02606	0.81	+1.3
2,753,335	-		CCNA_02606	0.83	+0.6
2,753,339	+		CCNA_02606	0.83	-1.0
2,753,339	+		CCNA_02606	0.83	-1.9
2,753,339	+		CCNA_02606	0.83	-0.3
2,753,340	+		CCNA_02606	0.83	-1.0
2,753,344	+		CCNA_02606	0.83	-1.7
2,753,347	-		CCNA_02606	0.83	-1.3
2,753,347	-		CCNA_02606	0.83	-1.2
2,753,347	-		CCNA_02606	0.83	-2.4
2,753,348	-		CCNA_02606	0.83	-1.0
2,753,373	+		CCNA_02606	0.84	-1.4
2,753,404	+		CCNA_02606	0.86	-0.2
2,753,451	-		CCNA_02606	0.88	+2.9
2,753,465	+		CCNA_02606	0.88	-1.7
2,753,465	+		CCNA_02606	0.88	-1.1
2,753,473	-		CCNA_02606	0.88	-0.9
2,753,506	+		CCNA_02606	0.90	-1.0
2,753,532	+				+0.1
2,753,534	+				-0.5
2,753,534	+				-1.7
2,753,534	+				-3.0
2,753,535	-				-1.1
2,753,539	+				-1.1
2,753,539	+				-1.0
2,753,539	+				+1.1
2,753,539	+				-0.4
2,753,539	+				-1.5
2,753,539	+				-1.1
2,753,542	-				-1.1
2,753,542	-				-1.0
2,753,542	-				-1.8
2,753,542	-				-0.4
2,753,542	-				+0.9
2,753,542	-				-1.2
2,753,547	-				-1.4
2,753,547	-				-0.5
2,753,547	-				-1.7
2,753,547	-				-3.6
2,753,547	-				+0.3
2,753,610	+				-1.7
2,753,610	+				+0.9
2,753,637	+				-2.2
2,753,637	+				-0.4
2,753,719	+				-0.9
2,753,719	-				+2.4
2,753,724	+				+0.3
2,753,724	+				-1.1
2,753,732	-				-1.7
2,753,737	+				-2.7
2,753,737	-				-0.8
2,753,747	+				-2.1
2,753,747	+				+0.1
2,753,754	-				-1.5
2,753,755	-				+0.3
2,753,755	-				+0.1
2,753,755	-				-0.5
2,753,755	-				+2.0
2,753,807	-				-0.8