Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02501

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
2,648,289	+		CCNA_02498	0.40	+0.5
2,648,297	-		CCNA_02498	0.42	-0.3
2,648,309	+		CCNA_02498	0.44	+0.5
2,648,314	+		CCNA_02498	0.44	-2.5
2,648,314	+		CCNA_02498	0.44	+0.0
2,648,314	+		CCNA_02498	0.44	+0.5
2,648,322	-		CCNA_02498	0.46	-3.8
2,648,328	+		CCNA_02498	0.46	+1.6
2,648,328	+		CCNA_02498	0.46	-0.4
2,648,333	+		CCNA_02498	0.47	+0.3
2,648,333	+		CCNA_02498	0.47	-1.2
2,648,336	-		CCNA_02498	0.48	-2.2
2,648,336	-		CCNA_02498	0.48	-1.8
2,648,336	-		CCNA_02498	0.48	-0.8
2,648,341	-		CCNA_02498	0.48	-1.3
2,648,346	-		CCNA_02498	0.49	-0.5
2,648,350	+		CCNA_02498	0.50	+3.6
2,648,351	-		CCNA_02498	0.50	-2.7
2,648,351	-		CCNA_02498	0.50	-0.4
2,648,380	-		CCNA_02498	0.54	-0.9
2,648,421	+		CCNA_02498	0.61	-0.9
2,648,429	-		CCNA_02498	0.62	+0.7
2,648,437	+		CCNA_02498	0.63	+0.2
2,648,437	+		CCNA_02498	0.63	+1.1
2,648,437	+		CCNA_02498	0.63	-0.1
2,648,437	+		CCNA_02498	0.63	-1.5
2,648,445	-		CCNA_02498	0.64	+0.1
2,648,468	-		CCNA_02498	0.68	-1.8
2,648,509	+		CCNA_02498	0.74	+0.5
2,648,509	+		CCNA_02498	0.74	+1.0
2,648,517	-		CCNA_02498	0.75	-2.8
2,648,517	-		CCNA_02498	0.75	+0.1
2,648,528	-		CCNA_02498	0.77	+0.1
2,648,571	-		CCNA_02498	0.83	-1.7
2,648,591	-		CCNA_02498	0.86	-2.4
2,648,606	-		CCNA_02498	0.89	-0.5
2,648,618	-				-0.4
2,648,618	-				-1.0
2,648,655	-				-1.3
2,648,655	-				-2.6
2,648,673	+				-0.6
2,648,673	+				+0.4
2,648,678	+				+2.2
2,648,686	-				+0.1
2,648,690	+				+1.6
2,648,709	+				+1.2
2,648,719	+				+1.6
2,648,719	+				+2.3
2,648,754	+		CCNA_02499	0.20	+0.1
2,648,754	+		CCNA_02499	0.20	+0.1
2,648,762	-		CCNA_02499	0.22	-2.0
2,648,764	+		CCNA_02499	0.23	+0.9
2,648,764	-		CCNA_02499	0.23	-1.3
2,648,767	-		CCNA_02499	0.24	-2.2
2,648,886	-		CCNA_02499	0.62	-0.3
2,648,913	-		CCNA_02499	0.70	+0.3
2,649,010	+				-0.8
2,649,015	+				-0.5
2,649,016	+				-1.5
2,649,029	-				-0.9
2,649,029	-				-0.4
2,649,036	+		CCNA_02500	0.12	-1.3
2,649,044	-		CCNA_02500	0.14	+2.4
2,649,044	-		CCNA_02500	0.14	-1.9
2,649,069	+		CCNA_02500	0.23	-1.0
2,649,077	-		CCNA_02500	0.26	-2.1
2,649,077	-		CCNA_02500	0.26	-0.4
2,649,077	-		CCNA_02500	0.26	-1.0
2,649,092	-		CCNA_02500	0.31	-0.5
2,649,095	+		CCNA_02500	0.32	-0.6
2,649,158	+		CCNA_02500	0.54	-1.9
2,649,184	-		CCNA_02500	0.64	-1.2
2,649,202	+		CCNA_02500	0.70	-1.1
2,649,202	+		CCNA_02500	0.70	-1.2
2,649,243	-		CCNA_02500	0.84	-1.3
2,649,243	-		CCNA_02500	0.84	-2.5
2,649,256	+		CCNA_02500	0.89	-0.4
2,649,274	-				-1.7
2,649,280	+				-0.0
2,649,281	+				+0.1
2,649,289	-				-0.1
2,649,303	+				-0.6
2,649,303	+				-1.7
2,649,309	+				-1.5
2,649,389	-				+2.1
2,649,404	+				+1.5
2,649,404	+				-1.5
2,649,442	-				-0.5
2,649,459	+				+0.1
2,649,564	-		CCNA_02501	0.12	-0.6
2,649,568	+		CCNA_02501	0.12	-0.2
2,649,568	+		CCNA_02501	0.12	-0.6
2,649,568	+		CCNA_02501	0.12	+0.7
2,649,576	-		CCNA_02501	0.12	-1.9
2,649,576	-		CCNA_02501	0.12	-1.6
2,649,576	-		CCNA_02501	0.12	-1.5
2,649,578	+		CCNA_02501	0.12	-0.5
2,649,578	+		CCNA_02501	0.12	+1.3
2,649,578	+		CCNA_02501	0.12	+2.1
2,649,581	-		CCNA_02501	0.12	-2.6
2,649,590	+		CCNA_02501	0.13	+0.2
2,649,600	-		CCNA_02501	0.13	-0.4
2,649,602	+		CCNA_02501	0.13	+1.6
2,649,602	+		CCNA_02501	0.13	+2.2
2,649,602	+		CCNA_02501	0.13	+1.6
2,649,608	+		CCNA_02501	0.14	+1.3
2,649,613	+		CCNA_02501	0.14	+1.4
2,649,613	+		CCNA_02501	0.14	+1.7
2,649,621	-		CCNA_02501	0.14	-3.2
2,649,621	-		CCNA_02501	0.14	-0.7
2,649,644	-		CCNA_02501	0.15	+2.6
2,649,658	+		CCNA_02501	0.16	+0.1
2,649,658	+		CCNA_02501	0.16	-0.3
2,649,661	+		CCNA_02501	0.16	-0.0
2,649,661	+		CCNA_02501	0.16	-1.2
2,649,663	+		CCNA_02501	0.16	+0.9
2,649,666	-		CCNA_02501	0.16	-1.3
2,649,669	-		CCNA_02501	0.16	-0.3
2,649,671	-		CCNA_02501	0.16	-1.0
2,649,673	+		CCNA_02501	0.16	-0.1
2,649,673	+		CCNA_02501	0.16	-1.7
2,649,676	-		CCNA_02501	0.16	-1.8
2,649,686	+		CCNA_02501	0.17	+1.9
2,649,691	+		CCNA_02501	0.17	-0.7
2,649,691	+		CCNA_02501	0.17	-1.7
2,649,691	+		CCNA_02501	0.17	+0.4
2,649,691	+		CCNA_02501	0.17	+1.3
2,649,691	+		CCNA_02501	0.17	-0.9
2,649,691	+		CCNA_02501	0.17	+0.7
2,649,691	+		CCNA_02501	0.17	-0.6
2,649,691	+		CCNA_02501	0.17	-1.1
2,649,694	-		CCNA_02501	0.17	-0.1
2,649,699	-		CCNA_02501	0.17	-3.6
2,649,699	-		CCNA_02501	0.17	+0.7
2,649,718	+		CCNA_02501	0.18	-1.7
2,649,728	+		CCNA_02501	0.19	+0.9
2,649,728	+		CCNA_02501	0.19	+3.1
2,649,728	+		CCNA_02501	0.19	+1.3
2,649,736	-		CCNA_02501	0.19	-1.9
2,649,751	+		CCNA_02501	0.20	-0.4
2,649,759	-		CCNA_02501	0.20	-2.2
2,649,767	+		CCNA_02501	0.20	-0.1
2,649,775	-		CCNA_02501	0.21	-1.5
2,649,777	+		CCNA_02501	0.21	-1.0
2,649,777	+		CCNA_02501	0.21	-0.3
2,649,800	+		CCNA_02501	0.22	+1.4
2,649,818	-		CCNA_02501	0.22	-1.0
2,649,818	-		CCNA_02501	0.22	+0.6
2,649,833	-		CCNA_02501	0.23	-2.5
2,649,833	-		CCNA_02501	0.23	-0.2
2,649,833	-		CCNA_02501	0.23	+0.8
2,649,858	+		CCNA_02501	0.24	-0.0
2,649,866	-		CCNA_02501	0.24	-1.1
2,649,873	-		CCNA_02501	0.25	-2.5
2,649,889	+		CCNA_02501	0.25	-0.6
2,649,901	+		CCNA_02501	0.26	-2.7
2,649,971	-		CCNA_02501	0.29	-0.4
2,649,971	-		CCNA_02501	0.29	-3.1
2,649,971	-		CCNA_02501	0.29	-0.7
2,649,971	-		CCNA_02501	0.29	+0.7
2,649,978	+		CCNA_02501	0.29	+2.4
2,650,039	+		CCNA_02501	0.32	+1.7
2,650,047	-		CCNA_02501	0.32	-2.8
2,650,061	+		CCNA_02501	0.33	-1.8
2,650,111	-		CCNA_02501	0.35	-1.5
2,650,132	+		CCNA_02501	0.36	+0.3
2,650,156	+		CCNA_02501	0.37	+1.6
2,650,157	+		CCNA_02501	0.37	-1.0
2,650,158	+		CCNA_02501	0.37	+0.2
2,650,158	+		CCNA_02501	0.37	-2.1
2,650,158	+		CCNA_02501	0.37	-0.3
2,650,158	+		CCNA_02501	0.37	-0.7
2,650,163	+		CCNA_02501	0.37	+1.1
2,650,184	+		CCNA_02501	0.38	+2.6
2,650,209	+		CCNA_02501	0.39	+2.6
2,650,216	+		CCNA_02501	0.39	+1.7
2,650,224	-		CCNA_02501	0.39	-0.9
2,650,224	-		CCNA_02501	0.39	+0.6
2,650,259	-		CCNA_02501	0.41	-1.8
2,650,268	+		CCNA_02501	0.41	-0.4
2,650,270	+		CCNA_02501	0.41	-1.5
2,650,276	-		CCNA_02501	0.42	+2.3
2,650,283	-		CCNA_02501	0.42	+3.7
2,650,285	+		CCNA_02501	0.42	+2.6
2,650,285	+		CCNA_02501	0.42	+1.6
2,650,285	+		CCNA_02501	0.42	-0.6
2,650,300	-		CCNA_02501	0.43	+0.5
2,650,309	+		CCNA_02501	0.43	-0.9
2,650,378	+		CCNA_02501	0.46	+1.1
2,650,378	+		CCNA_02501	0.46	-0.5
2,650,481	+		CCNA_02501	0.50	+0.9
2,650,504	+		CCNA_02501	0.51	-0.6
2,650,504	+		CCNA_02501	0.51	-0.1
2,650,504	+		CCNA_02501	0.51	-0.0
2,650,504	+		CCNA_02501	0.51	-1.9
2,650,512	-		CCNA_02501	0.51	+0.4
2,650,512	-		CCNA_02501	0.51	-2.2
2,650,516	+				+0.7
2,650,516	+		CCNA_02501	0.52	-0.7
2,650,548	-		CCNA_02501	0.53	-0.1
2,650,560	+		CCNA_02501	0.54	-0.4
2,650,560	+		CCNA_02501	0.54	+0.0
2,650,560	+		CCNA_02501	0.54	-0.4
2,650,560	+		CCNA_02501	0.54	-0.3
2,650,562	+		CCNA_02501	0.54	-2.4
2,650,568	-		CCNA_02501	0.54	-2.3
2,650,568	-		CCNA_02501	0.54	-0.5
2,650,570	-		CCNA_02501	0.54	-1.5
2,650,584	+		CCNA_02501	0.55	-1.2
2,650,592	-		CCNA_02501	0.55	-2.7
2,650,627	+		CCNA_02501	0.56	-0.6
2,650,627	+		CCNA_02501	0.56	-0.6
2,650,647	-		CCNA_02501	0.57	-0.1
2,650,726	-		CCNA_02501	0.60	-1.6
2,650,726	-		CCNA_02501	0.60	-2.7
2,650,726	-		CCNA_02501	0.60	-1.3
2,650,754	-		CCNA_02501	0.62	-0.9
2,650,759	-		CCNA_02501	0.62	-0.2
2,650,770	+		CCNA_02501	0.62	-0.4
2,650,778	-		CCNA_02501	0.63	-0.4
2,650,778	-		CCNA_02501	0.63	+0.2
2,650,803	+		CCNA_02501	0.64	-0.2
2,650,808	-		CCNA_02501	0.64	+3.3
2,650,879	-		CCNA_02501	0.67	-2.2
2,650,921	+		CCNA_02501	0.69	+1.0
2,651,043	-		CCNA_02501	0.74	+0.6
2,651,052	+		CCNA_02501	0.74	-0.9
2,651,055	+		CCNA_02501	0.74	-0.9
2,651,060	-		CCNA_02501	0.74	+0.5
2,651,070	+		CCNA_02501	0.75	-0.8
2,651,070	+		CCNA_02501	0.75	-0.1
2,651,070	+		CCNA_02501	0.75	-0.6
2,651,070	+		CCNA_02501	0.75	-1.0
2,651,078	-		CCNA_02501	0.75	+0.1
2,651,078	-		CCNA_02501	0.75	+0.1
2,651,091	-		CCNA_02501	0.76	-1.1
2,651,143	+		CCNA_02501	0.78	+1.2
2,651,160	+		CCNA_02501	0.79	+1.8
2,651,217	-		CCNA_02501	0.81	-1.2
2,651,222	+		CCNA_02501	0.81	-1.8
2,651,243	-		CCNA_02501	0.82	+0.1
2,651,243	-		CCNA_02501	0.82	-2.0
2,651,261	+		CCNA_02501	0.83	-0.3
2,651,266	+		CCNA_02501	0.83	-0.5
2,651,269	-		CCNA_02501	0.83	-2.3
2,651,281	+		CCNA_02501	0.84	+4.6
2,651,306	-		CCNA_02501	0.85	-3.0
2,651,366	+		CCNA_02501	0.87	-1.0
2,651,374	-		CCNA_02501	0.88	-1.6
2,651,374	-		CCNA_02501	0.88	+3.1
2,651,409	+		CCNA_02501	0.89	+0.6
2,651,418	+		CCNA_02501	0.89	-1.3
2,651,426	-		CCNA_02501	0.90	-1.9
2,651,426	-		CCNA_02501	0.90	+0.8
2,651,430	+				+1.5
2,651,432	+				+1.2
2,651,457	-				+0.5
2,651,461	+				-1.3
2,651,503	-				-1.6
2,651,505	+				+0.3
2,651,539	-				-1.0
2,651,570	-				-1.0
2,651,588	+				-1.5
2,651,596	-				-0.6
2,651,618	-				-1.3
2,651,643	+				+0.4
2,651,651	-				-0.2
2,651,673	+				+2.3
2,651,673	+				+2.0
2,651,706	+				-1.4
2,651,706	+				-0.3
2,651,745	+				+0.1
2,651,752	+				-1.0
2,651,762	+				-0.9
2,651,770	+				+0.5
2,651,770	-				-1.1
2,651,770	-				-1.0
2,651,780	+				-0.5
2,651,780	+				-0.4
2,651,810	+		CCNA_02502	0.12	+0.6
2,651,810	+		CCNA_02502	0.12	-0.3
2,651,810	+		CCNA_02502	0.12	-0.8
2,651,810	+		CCNA_02502	0.12	+0.1
2,651,810	+		CCNA_02502	0.12	-0.5
2,651,810	+		CCNA_02502	0.12	+2.3
2,651,810	+		CCNA_02502	0.12	-1.4
2,651,810	+		CCNA_02502	0.12	+3.1
2,651,810	+		CCNA_02502	0.12	+0.0
2,651,810	+		CCNA_02502	0.12	-0.8
2,651,818	-		CCNA_02502	0.13	+0.4
2,651,818	-		CCNA_02502	0.13	-2.7
2,651,818	-		CCNA_02502	0.13	-1.7
2,651,818	-		CCNA_02502	0.13	-1.5
2,651,818	-		CCNA_02502	0.13	-1.1
2,651,818	-				+3.1
2,651,818	-		CCNA_02502	0.13	+0.2
2,651,818	-				+1.5
2,651,818	-		CCNA_02502	0.13	-2.0
2,651,818	-		CCNA_02502	0.13	+0.9
2,651,818	-		CCNA_02502	0.13	-2.6
2,651,818	-		CCNA_02502	0.13	-1.5
2,651,841	+		CCNA_02502	0.15	-0.9
2,651,846	+		CCNA_02502	0.15	+0.7
2,651,854	-		CCNA_02502	0.16	-0.5
2,651,920	-		CCNA_02502	0.22	-1.8
2,651,925	-		CCNA_02502	0.22	-0.4
2,651,929	+		CCNA_02502	0.22	+0.7
2,651,934	+		CCNA_02502	0.23	+0.2
2,651,953	-		CCNA_02502	0.25	+0.1
2,651,966	-		CCNA_02502	0.26	-1.7
2,651,985	+		CCNA_02502	0.27	+1.8
2,652,047	-		CCNA_02502	0.33	-2.1
2,652,100	+		CCNA_02502	0.37	+0.3
2,652,105	+		CCNA_02502	0.38	+1.7
2,652,141	-		CCNA_02502	0.41	-1.7
2,652,143	+		CCNA_02502	0.41	-1.6
2,652,177	+		CCNA_02502	0.44	-1.1
2,652,192	+		CCNA_02502	0.45	-0.7
2,652,211	+		CCNA_02502	0.47	+0.5
2,652,257	+		CCNA_02502	0.51	+0.6
2,652,265	-		CCNA_02502	0.51	-0.1
2,652,276	+		CCNA_02502	0.52	+1.0
2,652,303	+		CCNA_02502	0.55	+0.1
2,652,303	+		CCNA_02502	0.55	+0.3
2,652,315	+		CCNA_02502	0.56	-1.2
2,652,344	+		CCNA_02502	0.58	+1.3
2,652,349	+				+3.8
2,652,354	+		CCNA_02502	0.59	+0.3
2,652,362	-		CCNA_02502	0.60	-2.9
2,652,365	+		CCNA_02502	0.60	-0.0
2,652,375	+		CCNA_02502	0.61	-1.0
2,652,412	+		CCNA_02502	0.64	+0.1
2,652,413	+		CCNA_02502	0.64	+0.7
2,652,449	-		CCNA_02502	0.67	-0.1
2,652,451	-		CCNA_02502	0.67	-2.1
2,652,453	+		CCNA_02502	0.68	+2.1
2,652,462	-		CCNA_02502	0.68	-0.6
2,652,480	-		CCNA_02502	0.70	-0.7
2,652,507	-		CCNA_02502	0.72	-2.5
2,652,610	+		CCNA_02502	0.81	-2.1
2,652,615	+		CCNA_02502	0.82	+0.5
2,652,618	-		CCNA_02502	0.82	-0.0
2,652,618	-		CCNA_02502	0.82	+0.8
2,652,634	+		CCNA_02502	0.83	+0.1
2,652,634	+		CCNA_02502	0.83	-0.3
2,652,643	+		CCNA_02502	0.84	-1.4