Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02395

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
2,537,166	+		CCNA_03881	0.46	-0.7
2,537,226	+		CCNA_03881	0.63	-0.7
2,537,226	+		CCNA_03881	0.63	-1.3
2,537,234	-		CCNA_03881	0.66	-0.5
2,537,272	-		CCNA_03881	0.77	+1.4
2,537,306	-		CCNA_03881	0.87	+2.0
2,537,322	+				-2.5
2,537,345	+				-0.7
2,537,345	+				-2.2
2,537,345	+				-1.3
2,537,345	+				-0.7
2,537,345	+				+2.1
2,537,345	+				-0.2
2,537,345	+				-0.6
2,537,345	+				+0.1
2,537,345	+				+2.2
2,537,353	-				-3.0
2,537,353	-				+0.5
2,537,353	-				+0.4
2,537,353	-				-1.3
2,537,353	-				-0.4
2,537,353	-				-1.0
2,537,353	-				+0.5
2,537,353	-				+0.4
2,537,353	-				-0.7
2,537,353	-				+0.3
2,537,353	-				-0.1
2,537,353	-				-1.7
2,537,353	-				-0.9
2,537,353	-				-0.4
2,537,353	-				-0.4
2,537,353	-				-0.3
2,537,353	-				+0.3
2,537,353	-				+0.8
2,537,353	-				-0.1
2,537,353	-				-0.4
2,537,353	-				-1.2
2,537,353	-				-1.0
2,537,353	-				-2.0
2,537,375	-				-1.0
2,537,375	-				+1.5
2,537,387	+				-1.3
2,537,388	-				+2.0
2,537,395	+				+0.1
2,537,395	-				+2.6
2,537,403	-				-0.7
2,537,403	-				+1.7
2,537,420	-				-1.3
2,537,442	-				-1.5
2,537,451	+				-0.9
2,537,479	-		CCNA_02394	0.13	-0.8
2,537,491	+		CCNA_02394	0.15	+2.1
2,537,502	+		CCNA_02394	0.17	+0.8
2,537,510	-		CCNA_02394	0.18	+0.1
2,537,510	-		CCNA_02394	0.18	-1.6
2,537,512	+		CCNA_02394	0.18	-0.2
2,537,512	+		CCNA_02394	0.18	+0.7
2,537,512	+		CCNA_02394	0.18	+2.3
2,537,515	-		CCNA_02394	0.19	+0.3
2,537,515	-		CCNA_02394	0.19	-3.4
2,537,592	+		CCNA_02394	0.30	-2.8
2,537,595	-		CCNA_02394	0.31	+2.5
2,537,620	+		CCNA_02394	0.35	+0.7
2,537,639	+		CCNA_02394	0.38	-0.9
2,537,639	+		CCNA_02394	0.38	-0.8
2,537,647	-		CCNA_02394	0.39	+0.2
2,537,658	+		CCNA_02394	0.40	+1.2
2,537,667	-		CCNA_02394	0.42	-1.2
2,537,672	-		CCNA_02394	0.43	+0.6
2,537,672	-		CCNA_02394	0.43	+0.8
2,537,727	+		CCNA_02394	0.51	-0.3
2,537,729	+		CCNA_02394	0.51	+0.5
2,537,729	+		CCNA_02394	0.51	+0.1
2,537,729	+		CCNA_02394	0.51	-0.9
2,537,732	-		CCNA_02394	0.52	+1.1
2,537,732	-		CCNA_02394	0.52	-1.6
2,537,752	-		CCNA_02394	0.55	-1.4
2,537,752	-		CCNA_02394	0.55	-0.1
2,537,793	-		CCNA_02394	0.61	+1.1
2,537,816	-		CCNA_02394	0.64	+0.9
2,537,844	-		CCNA_02394	0.68	+1.0
2,537,893	-		CCNA_02394	0.76	+1.4
2,537,906	+		CCNA_02394	0.78	-0.8
2,537,909	+		CCNA_02394	0.78	+1.1
2,537,917	-		CCNA_02394	0.79	-0.6
2,537,925	+		CCNA_02394	0.81	+0.2
2,537,932	-		CCNA_02394	0.82	+0.8
2,537,932	-		CCNA_02394	0.82	+0.9
2,537,933	-		CCNA_02394	0.82	+1.5
2,537,933	-		CCNA_02394	0.82	+0.9
2,537,940	+		CCNA_02394	0.83	+1.1
2,537,945	+		CCNA_02394	0.84	-0.1
2,537,953	-		CCNA_02394	0.85	+0.0
2,537,972	+		CCNA_02394	0.88	-2.6
2,538,003	-				+2.3
2,538,015	-				+2.2
2,538,030	+				+1.1
2,538,062	-				+1.6
2,538,064	+				-1.9
2,538,067	-				+2.9
2,538,072	-				+3.0
2,538,120	+				-1.8
2,538,141	+				-1.8
2,538,149	-				+3.0
2,538,149	-				+2.5
2,538,149	-				+3.0
2,538,159	-				+3.0
2,538,171	-				+2.3
2,538,178	-				+2.5
2,538,210	+		CCNA_02395	0.15	+0.1
2,538,218	-		CCNA_02395	0.18	+3.0
2,538,218	-		CCNA_02395	0.18	+2.2
2,538,218	-		CCNA_02395	0.18	+2.6
2,538,218	-		CCNA_02395	0.18	+2.4
2,538,229	+		CCNA_02395	0.21	-2.2
2,538,286	+		CCNA_02395	0.38	-2.0
2,538,286	+		CCNA_02395	0.38	-1.5
2,538,294	-		CCNA_02395	0.41	+2.7
2,538,294	-		CCNA_02395	0.41	+3.1
2,538,301	-		CCNA_02395	0.43	+2.8
2,538,304	-		CCNA_02395	0.44	+2.1
2,538,304	-		CCNA_02395	0.44	+2.4
2,538,320	+		CCNA_02395	0.48	+1.8
2,538,338	-		CCNA_02395	0.54	+2.7
2,538,368	+		CCNA_02395	0.63	-2.5
2,538,376	+				+2.1
2,538,394	+		CCNA_02395	0.71	-1.2
2,538,429	+		CCNA_02395	0.82	-2.8
2,538,429	+		CCNA_02395	0.82	-2.5
2,538,451	-		CCNA_02395	0.88	+1.9
2,538,504	-				+2.4
2,538,546	+				-0.6
2,538,546	+				-2.9
2,538,546	+				+1.5
2,538,554	-				-0.7
2,538,554	-				+1.0
2,538,576	+				-1.8
2,538,576	+				+1.1
2,538,576	+				-1.3
2,538,584	-				-0.3
2,538,584	-				-0.3
2,538,678	+				+0.3
2,538,678	+				-2.1
2,538,678	+				-1.5
2,538,681	-				-0.2
2,538,688	-				+0.4
2,538,688	-				-2.3
2,538,688	-				+2.1
2,538,698	-				+0.6
2,538,703	-				+1.5
2,538,703	-				-1.9
2,538,703	-				+2.6
2,538,703	-				-0.1
2,538,703	-				-1.7
2,538,703	-				-0.7
2,538,703	-				-0.7
2,538,703	-				-2.6
2,538,722	+				+1.1
2,538,841	-		CCNA_02396	0.25	+1.9
2,538,851	+		CCNA_02396	0.26	-0.3
2,538,851	+		CCNA_02396	0.26	-0.1
2,538,852	+		CCNA_02396	0.26	+1.1
2,538,857	+		CCNA_02396	0.27	-1.9
2,538,857	+		CCNA_02396	0.27	-0.5
2,538,859	-		CCNA_02396	0.27	-2.2
2,538,865	-		CCNA_02396	0.28	+0.1
2,538,865	-		CCNA_02396	0.28	+1.3
2,538,865	-		CCNA_02396	0.28	+1.7
2,538,865	-		CCNA_02396	0.28	+1.7
2,538,867	+		CCNA_02396	0.28	+2.5
2,538,877	+		CCNA_02396	0.30	-2.2
2,538,877	+		CCNA_02396	0.30	+0.5
2,538,927	+		CCNA_02396	0.36	-0.3
2,538,972	+		CCNA_02396	0.43	-1.3
2,538,982	+		CCNA_02396	0.44	+2.0
2,538,982	-		CCNA_02396	0.44	-0.4
2,539,083	-		CCNA_02396	0.58	+0.5
2,539,083	-		CCNA_02396	0.58	-1.0
2,539,085	+		CCNA_02396	0.58	+0.2
2,539,118	+		CCNA_02396	0.63	+1.5
2,539,123	+		CCNA_02396	0.63	-1.3
2,539,123	+		CCNA_02396	0.63	-3.3
2,539,131	-		CCNA_02396	0.64	-0.4
2,539,131	-		CCNA_02396	0.64	+0.3
2,539,131	-		CCNA_02396	0.64	-1.0
2,539,131	-		CCNA_02396	0.64	+0.3
2,539,131	-		CCNA_02396	0.64	-0.7
2,539,131	-		CCNA_02396	0.64	+0.8
2,539,143	-		CCNA_02396	0.66	-2.0
2,539,149	+		CCNA_02396	0.67	-1.4
2,539,186	+		CCNA_02396	0.72	-0.9
2,539,195	+		CCNA_02396	0.73	-1.1
2,539,195	+		CCNA_02396	0.73	+0.5
2,539,203	-		CCNA_02396	0.74	-1.5
2,539,216	+		CCNA_02396	0.76	+2.2
2,539,226	-		CCNA_02396	0.78	-1.0
2,539,235	+		CCNA_02396	0.79	-3.1
2,539,243	-		CCNA_02396	0.80	-2.0
2,539,243	-		CCNA_02396	0.80	-0.6
2,539,243	-		CCNA_02396	0.80	+0.3
2,539,262	+		CCNA_02396	0.82	-1.1
2,539,262	+		CCNA_02396	0.82	-0.8
2,539,324	-				-1.0
2,539,324	-				-1.2
2,539,353	+				-1.3
2,539,361	-				-0.8
2,539,373	-				+0.9
2,539,464	+				-1.9
2,539,464	+				-1.2
2,539,472	-				+1.0
2,539,472	-				-0.1
2,539,479	+				-0.7
2,539,479	+				-0.1
2,539,487	-				+2.1