Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02385

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
2,527,032	+		CCNA_02384	0.56	-1.5
2,527,032	+		CCNA_02384	0.56	+2.6
2,527,037	+		CCNA_02384	0.57	+0.1
2,527,040	-		CCNA_02384	0.57	+1.8
2,527,040	-		CCNA_02384	0.57	+3.3
2,527,040	-		CCNA_02384	0.57	+1.6
2,527,040	-		CCNA_02384	0.57	+1.6
2,527,040	-		CCNA_02384	0.57	+1.8
2,527,064	-		CCNA_02384	0.58	+1.2
2,527,064	-		CCNA_02384	0.58	+1.7
2,527,071	-		CCNA_02384	0.59	+1.2
2,527,098	-		CCNA_02384	0.60	+5.5
2,527,098	-		CCNA_02384	0.60	+1.6
2,527,122	-		CCNA_02384	0.61	+0.3
2,527,171	-		CCNA_02384	0.64	+1.6
2,527,182	+				+0.5
2,527,182	+		CCNA_02384	0.65	-2.8
2,527,182	+		CCNA_02384	0.65	-0.1
2,527,190	-		CCNA_02384	0.65	+2.5
2,527,190	-		CCNA_02384	0.65	+1.2
2,527,217	-		CCNA_02384	0.67	+2.8
2,527,296	+		CCNA_02384	0.71	+0.8
2,527,318	-		CCNA_02384	0.72	+2.0
2,527,319	+		CCNA_02384	0.72	-1.3
2,527,327	-		CCNA_02384	0.73	+2.4
2,527,378	-		CCNA_02384	0.76	+0.0
2,527,386	-		CCNA_02384	0.76	+1.7
2,527,386	-		CCNA_02384	0.76	-0.1
2,527,386	-		CCNA_02384	0.76	-0.2
2,527,491	+		CCNA_02384	0.82	+2.0
2,527,542	+		CCNA_02384	0.85	-0.8
2,527,542	+		CCNA_02384	0.85	-1.3
2,527,560	+		CCNA_02384	0.86	-1.7
2,527,571	+		CCNA_02384	0.86	-1.0
2,527,576	+		CCNA_02384	0.87	+1.2
2,527,577	+		CCNA_02384	0.87	+1.0
2,527,586	-		CCNA_02384	0.87	+1.6
2,527,593	-		CCNA_02384	0.88	+3.0
2,527,599	+		CCNA_02384	0.88	-0.5
2,527,605	-		CCNA_02384	0.88	+4.4
2,527,619	+		CCNA_02384	0.89	-1.2
2,527,669	-				+0.9
2,527,680	-				+3.0
2,527,722	-				+0.7
2,527,727	-				+1.3
2,527,835	+				-0.3
2,527,835	+				+1.3
2,527,835	+				-1.8
2,527,843	-				-0.9
2,527,843	-				+0.4
2,527,843	-				+1.2
2,527,858	+				-1.2
2,527,866	-				+2.3
2,527,907	+				-1.0
2,527,932	+				-0.5
2,527,941	+				+1.4
2,527,987	-				-0.3
2,527,992	+				-0.4
2,528,061	-				+4.0
2,528,116	+				-3.8
2,528,116	+				-0.8
2,528,144	+				-1.7
2,528,152	-		CCNA_02385	0.10	+2.6
2,528,152	-		CCNA_02385	0.10	+1.2
2,528,152	-		CCNA_02385	0.10	-0.4
2,528,152	-		CCNA_02385	0.10	+2.8
2,528,178	+		CCNA_02385	0.12	+0.6
2,528,182	-		CCNA_02385	0.13	+2.8
2,528,184	-		CCNA_02385	0.13	+1.4
2,528,196	-		CCNA_02385	0.14	+1.9
2,528,211	+		CCNA_02385	0.15	-0.3
2,528,218	+		CCNA_02385	0.15	+1.1
2,528,218	+		CCNA_02385	0.15	-0.6
2,528,234	-		CCNA_02385	0.16	+2.0
2,528,234	-		CCNA_02385	0.16	-1.1
2,528,234	-		CCNA_02385	0.16	+1.3
2,528,234	-		CCNA_02385	0.16	+1.1
2,528,245	+		CCNA_02385	0.17	-0.4
2,528,253	-		CCNA_02385	0.18	+0.6
2,528,253	-		CCNA_02385	0.18	+1.3
2,528,253	-		CCNA_02385	0.18	+1.0
2,528,308	+		CCNA_02385	0.22	-1.2
2,528,316	+		CCNA_02385	0.22	-1.3
2,528,324	-		CCNA_02385	0.23	+0.3
2,528,431	+		CCNA_02385	0.31	+0.5
2,528,431	-		CCNA_02385	0.31	+0.7
2,528,433	-		CCNA_02385	0.31	-0.5
2,528,439	-		CCNA_02385	0.31	+1.4
2,528,439	-		CCNA_02385	0.31	+0.3
2,528,453	-		CCNA_02385	0.32	+1.0
2,528,485	-		CCNA_02385	0.34	+0.4
2,528,521	-		CCNA_02385	0.37	+0.7
2,528,589	+		CCNA_02385	0.42	+2.0
2,528,592	-		CCNA_02385	0.42	-0.3
2,528,599	+		CCNA_02385	0.43	+1.5
2,528,653	-		CCNA_02385	0.47	+0.0
2,528,653	-		CCNA_02385	0.47	-0.1
2,528,653	-		CCNA_02385	0.47	+0.5
2,528,653	-		CCNA_02385	0.47	+1.7
2,528,672	-		CCNA_02385	0.48	+1.7
2,528,703	-		CCNA_02385	0.50	+0.9
2,528,710	+		CCNA_02385	0.51	-3.0
2,528,718	-		CCNA_02385	0.51	-0.1
2,528,753	+		CCNA_02385	0.54	-2.3
2,528,758	+		CCNA_02385	0.54	-0.8
2,528,761	-		CCNA_02385	0.54	+0.9
2,528,761	-		CCNA_02385	0.54	+1.1
2,528,761	-		CCNA_02385	0.54	+0.1
2,528,761	-		CCNA_02385	0.54	+1.0
2,528,763	+		CCNA_02385	0.55	-3.2
2,528,764	+		CCNA_02385	0.55	+2.0
2,528,774	+		CCNA_02385	0.55	-2.1
2,528,774	+		CCNA_02385	0.55	+0.2
2,528,829	+		CCNA_02385	0.59	-0.5
2,528,829	+		CCNA_02385	0.59	-1.2
2,528,830	-		CCNA_02385	0.59	-1.1
2,528,830	-		CCNA_02385	0.59	+0.8
2,528,830	-		CCNA_02385	0.59	+3.5
2,528,830	-		CCNA_02385	0.59	+2.7
2,528,842	-		CCNA_02385	0.60	-0.3
2,528,849	-		CCNA_02385	0.61	-0.2
2,528,849	-		CCNA_02385	0.61	+3.4
2,528,851	+		CCNA_02385	0.61	-1.2
2,528,851	+		CCNA_02385	0.61	-0.5
2,528,873	-		CCNA_02385	0.63	+0.6
2,528,888	+		CCNA_02385	0.64	-2.9
2,528,908	+		CCNA_02385	0.65	-2.8
2,528,938	-				+5.0
2,528,938	-		CCNA_02385	0.67	+2.7
2,528,957	+		CCNA_02385	0.69	-0.3
2,528,965	-		CCNA_02385	0.69	+1.1
2,529,014	-		CCNA_02385	0.73	-0.2
2,529,014	-		CCNA_02385	0.73	+0.3
2,529,077	-		CCNA_02385	0.77	-0.0
2,529,098	+		CCNA_02385	0.79	-2.3
2,529,098	+		CCNA_02385	0.79	-0.7
2,529,098	+		CCNA_02385	0.79	-1.3
2,529,100	-		CCNA_02385	0.79	+0.1
2,529,106	-		CCNA_02385	0.79	+1.0
2,529,106	-		CCNA_02385	0.79	+0.1
2,529,106	-		CCNA_02385	0.79	+0.1
2,529,106	-		CCNA_02385	0.79	+1.1
2,529,106	-		CCNA_02385	0.79	-0.1
2,529,116	+		CCNA_02385	0.80	-0.5
2,529,121	+				+2.0
2,529,143	+		CCNA_02385	0.82	-2.2
2,529,151	-		CCNA_02385	0.83	-1.0
2,529,161	-		CCNA_02385	0.83	+2.0
2,529,163	+		CCNA_02385	0.84	+0.0
2,529,163	+		CCNA_02385	0.84	+0.0
2,529,171	-		CCNA_02385	0.84	+0.6
2,529,171	-		CCNA_02385	0.84	+0.0
2,529,209	+		CCNA_02385	0.87	-0.7
2,529,209	+		CCNA_02385	0.87	-0.5
2,529,211	-		CCNA_02385	0.87	+0.6
2,529,286	+				-0.5
2,529,287	+				+0.0
2,529,288	-				+1.4
2,529,301	+				-2.2
2,529,309	+				-0.8
2,529,356	-				+1.0
2,529,384	+				-1.3
2,529,389	+				+0.2
2,529,584	-				-0.6
2,529,725	+		CCNA_02386	0.18	-1.2
2,529,730	-		CCNA_02386	0.19	+1.6
2,529,739	-		CCNA_02386	0.19	+1.1
2,529,743	+		CCNA_02386	0.20	-0.4
2,529,746	-		CCNA_02386	0.20	-0.3
2,529,748	+		CCNA_02386	0.20	-0.8
2,529,751	-		CCNA_02386	0.20	+0.3
2,529,756	-		CCNA_02386	0.21	-1.0
2,529,797	-		CCNA_02386	0.24	+0.3
2,529,804	-		CCNA_02386	0.25	-0.7
2,529,907	-		CCNA_02386	0.33	-2.0
2,529,907	-		CCNA_02386	0.33	+0.6
2,529,921	+		CCNA_02386	0.34	+0.6
2,529,929	-		CCNA_02386	0.35	+0.8
2,529,929	-		CCNA_02386	0.35	-1.0
2,529,929	-		CCNA_02386	0.35	-2.7
2,529,935	+		CCNA_02386	0.35	-1.0
2,529,943	-		CCNA_02386	0.36	-0.2
2,529,943	-		CCNA_02386	0.36	-0.2
2,529,943	-		CCNA_02386	0.36	-0.7
2,529,943	-		CCNA_02386	0.36	-0.8
2,529,959	+		CCNA_02386	0.37	-0.9
2,529,959	+		CCNA_02386	0.37	-2.6
2,529,969	-		CCNA_02386	0.38	-1.9
2,529,969	-		CCNA_02386	0.38	+0.2
2,529,977	-		CCNA_02386	0.39	+0.7
2,529,992	-		CCNA_02386	0.40	-0.4
2,530,056	-		CCNA_02386	0.45	-0.6
2,530,078	+		CCNA_02386	0.47	-0.5
2,530,158	+		CCNA_02386	0.54	-1.1
2,530,211	+		CCNA_02386	0.58	-0.1
2,530,219	-		CCNA_02386	0.59	-2.3
2,530,245	-		CCNA_02386	0.61	+0.4
2,530,256	-		CCNA_02386	0.62	-1.6
2,530,266	-		CCNA_02386	0.62	-2.0
2,530,280	+		CCNA_02386	0.64	-1.0
2,530,319	-		CCNA_02386	0.67	-0.8
2,530,319	-		CCNA_02386	0.67	+0.2
2,530,343	-		CCNA_02386	0.69	+0.2
2,530,343	-		CCNA_02386	0.69	-1.9
2,530,343	-		CCNA_02386	0.69	-1.8
2,530,343	-		CCNA_02386	0.69	-2.9