Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02200

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
2,348,484	-				+1.2
2,348,486	+				+0.4
2,348,486	+				-1.5
2,348,486	+				+0.7
2,348,486	+				-2.4
2,348,486	+				+1.0
2,348,486	+				-0.7
2,348,494	-				+1.8
2,348,494	-				+1.4
2,348,494	-				+2.0
2,348,494	-				+1.6
2,348,494	-				+1.6
2,348,494	-				+1.4
2,348,494	-				+1.8
2,348,494	-				+2.4
2,348,518	+				-0.1
2,348,521	-				+1.6
2,348,526	-				+3.1
2,348,526	-				+0.4
2,348,538	+				-0.4
2,348,540	-				+1.9
2,348,542	+				-0.9
2,348,543	+				-0.8
2,348,545	-				+0.9
2,348,545	-				-0.1
2,348,550	-				-2.2
2,348,560	-				+0.4
2,348,565	+				-0.2
2,348,568	-				-0.3
2,348,570	+				-1.1
2,348,580	+				-0.4
2,348,580	+				-1.3
2,348,580	+				-0.4
2,348,580	+				-0.9
2,348,580	+				-0.2
2,348,580	+				+0.4
2,348,588	-				+0.2
2,348,588	-				-1.8
2,348,588	-				+0.5
2,348,616	+				-1.2
2,348,616	+				-1.7
2,348,616	+				-0.6
2,348,616	+				-0.4
2,348,624	-				-0.6
2,348,651	-		CCNA_02199	0.10	-2.4
2,348,666	+		CCNA_02199	0.12	-1.1
2,348,693	-		CCNA_02199	0.16	-0.1
2,348,693	-		CCNA_02199	0.16	-1.2
2,348,698	-		CCNA_02199	0.17	+0.7
2,348,706	+		CCNA_02199	0.18	-0.4
2,348,708	-		CCNA_02199	0.18	+1.0
2,348,714	-		CCNA_02199	0.19	-0.7
2,348,714	-		CCNA_02199	0.19	+0.2
2,348,731	+		CCNA_02199	0.21	-0.1
2,348,764	+		CCNA_02199	0.26	-0.6
2,348,794	+		CCNA_02199	0.30	-1.2
2,348,802	-		CCNA_02199	0.31	-1.0
2,348,827	-		CCNA_02199	0.34	-1.4
2,348,831	+		CCNA_02199	0.35	+0.1
2,348,831	+		CCNA_02199	0.35	-1.5
2,348,841	+		CCNA_02199	0.36	-1.2
2,348,841	+		CCNA_02199	0.36	-0.3
2,348,841	+		CCNA_02199	0.36	-0.9
2,348,869	+		CCNA_02199	0.40	-1.1
2,348,877	-		CCNA_02199	0.41	-1.1
2,348,877	-		CCNA_02199	0.41	-0.1
2,348,899	+		CCNA_02199	0.44	-1.9
2,348,906	+		CCNA_02199	0.45	-1.5
2,348,911	+		CCNA_02199	0.45	+0.5
2,348,919	-		CCNA_02199	0.47	-1.7
2,348,929	-		CCNA_02199	0.48	-1.4
2,348,940	+		CCNA_02199	0.49	-2.0
2,348,958	-		CCNA_02199	0.52	-1.2
2,348,962	+		CCNA_02199	0.52	+0.1
2,349,034	+		CCNA_02199	0.62	-0.8
2,349,034	+		CCNA_02199	0.62	-1.1
2,349,034	+		CCNA_02199	0.62	-0.4
2,349,034	+		CCNA_02199	0.62	-0.4
2,349,034	+		CCNA_02199	0.62	+0.1
2,349,042	-		CCNA_02199	0.63	-1.0
2,349,042	-		CCNA_02199	0.63	-0.8
2,349,042	-		CCNA_02199	0.63	-0.9
2,349,042	-		CCNA_02199	0.63	-0.6
2,349,049	-		CCNA_02199	0.64	-2.2
2,349,057	+		CCNA_02199	0.65	-1.4
2,349,107	-		CCNA_02199	0.72	-1.6
2,349,235	+		CCNA_02199	0.89	+0.4
2,349,235	+		CCNA_02199	0.89	-0.5
2,349,245	+				-0.4
2,349,262	+				-2.9
2,349,270	-				-1.9
2,349,274	+				-0.2
2,349,274	+				+0.8
2,349,277	-				-1.7
2,349,315	-				-1.1
2,349,333	-				+0.3
2,349,369	+				+1.1
2,349,374	-		CCNA_02200	0.11	+0.9
2,349,384	-		CCNA_02200	0.14	-0.7
2,349,468	-		CCNA_02200	0.35	-0.5
2,349,504	+		CCNA_02200	0.44	-1.6
2,349,538	+		CCNA_02200	0.53	-0.3
2,349,538	+		CCNA_02200	0.53	+1.1
2,349,539	+		CCNA_02200	0.53	-1.6
2,349,547	-		CCNA_02200	0.55	+1.6
2,349,547	-		CCNA_02200	0.55	-0.3
2,349,558	+		CCNA_02200	0.58	-1.5
2,349,561	-		CCNA_02200	0.59	+0.5
2,349,574	-		CCNA_02200	0.62	-2.1
2,349,588	-		CCNA_02200	0.66	-1.9
2,349,601	+		CCNA_02200	0.69	+1.7
2,349,603	-		CCNA_02200	0.69	-1.9
2,349,635	+		CCNA_02200	0.78	-1.4
2,349,657	+		CCNA_02200	0.83	-1.0
2,349,716	+				-2.5
2,349,724	-				+0.4
2,349,767	-				+4.6
2,349,777	-				+0.7
2,349,820	+				-2.7
2,349,900	+		CCNA_02201	0.20	-0.5
2,349,900	+				+4.8
2,349,900	+		CCNA_02201	0.20	-0.1
2,349,900	-		CCNA_02201	0.20	-0.7
2,349,908	-		CCNA_02201	0.22	-0.4
2,349,908	-		CCNA_02201	0.22	+1.3
2,349,942	-		CCNA_02201	0.28	+0.9
2,349,972	+		CCNA_02201	0.33	+2.3
2,349,972	+		CCNA_02201	0.33	-1.4
2,349,980	-		CCNA_02201	0.35	+0.4
2,349,987	-		CCNA_02201	0.36	-0.3
2,349,992	-		CCNA_02201	0.37	+0.9
2,350,015	+		CCNA_02201	0.41	+0.8
2,350,027	+		CCNA_02201	0.43	+0.6
2,350,035	-		CCNA_02201	0.45	+1.0
2,350,035	-		CCNA_02201	0.45	+1.0
2,350,037	+		CCNA_02201	0.45	-0.9
2,350,055	-		CCNA_02201	0.48	-0.1
2,350,062	+		CCNA_02201	0.49	+1.5
2,350,074	+		CCNA_02201	0.52	+3.4
2,350,074	+		CCNA_02201	0.52	-0.0
2,350,074	+		CCNA_02201	0.52	-0.1
2,350,076	+		CCNA_02201	0.52	-0.8
2,350,082	-		CCNA_02201	0.53	+0.9
2,350,082	-				+0.7
2,350,178	-		CCNA_02201	0.70	+3.1
2,350,209	+		CCNA_02201	0.76	-0.9
2,350,237	-		CCNA_02201	0.81	-0.1
2,350,252	-		CCNA_02201	0.83	+0.2
2,350,346	-				-0.3
2,350,346	-				+0.1
2,350,349	+				-0.2
2,350,357	-				-0.6
2,350,357	-				-1.5
2,350,375	+				+1.2
2,350,375	+				-2.4
2,350,376	-				+3.7
2,350,376	-				+3.8
2,350,383	-				-0.4
2,350,450	+				-1.8
2,350,458	-				-1.8
2,350,459	-				-1.1
2,350,505	+		CCNA_02202	0.11	-1.6
2,350,554	+		CCNA_02202	0.18	+0.8
2,350,580	+		CCNA_02202	0.21	+0.6
2,350,615	+		CCNA_02202	0.25	-3.1
2,350,616	+		CCNA_02202	0.25	-2.5
2,350,639	-		CCNA_02202	0.28	-1.5
2,350,642	+		CCNA_02202	0.29	-0.1
2,350,643	-		CCNA_02202	0.29	-0.2
2,350,655	-		CCNA_02202	0.30	+0.1
2,350,655	-		CCNA_02202	0.30	-1.8
2,350,702	+		CCNA_02202	0.36	-0.3
2,350,704	+		CCNA_02202	0.36	-1.4
2,350,704	+		CCNA_02202	0.36	+1.3