Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26800 and AO356_26805 are separated by 84 nucleotides AO356_26805 and AO356_26810 are separated by 72 nucleotides AO356_26810 and AO356_26815 are separated by 69 nucleotides
AO356_26800: AO356_26800 - aldehyde dehydrogenase, at 6,102,773 to 6,104,260
_26800
AO356_26805: AO356_26805 - hypothetical protein, at 6,104,345 to 6,104,845
_26805
AO356_26810: AO356_26810 - ADP/ATP translocating protein, at 6,104,918 to 6,106,240
_26810
AO356_26815: AO356_26815 - short-chain dehydrogenase, at 6,106,310 to 6,107,368
_26815
Position (kb)
6104
6105
6106
6107 Strain fitness (log2 ratio)
-1
0
1
2 at 6103.977 kb on - strand, within AO356_26800 at 6104.021 kb on + strand, within AO356_26800 at 6104.255 kb on - strand at 6104.258 kb on + strand at 6104.258 kb on + strand at 6104.479 kb on + strand, within AO356_26805 at 6104.479 kb on + strand, within AO356_26805 at 6104.494 kb on + strand, within AO356_26805 at 6104.494 kb on + strand, within AO356_26805 at 6104.495 kb on - strand, within AO356_26805 at 6104.694 kb on + strand, within AO356_26805 at 6104.826 kb on - strand at 6104.886 kb on + strand at 6104.886 kb on + strand at 6104.892 kb on - strand at 6104.892 kb on - strand at 6105.145 kb on - strand, within AO356_26810 at 6105.148 kb on + strand, within AO356_26810 at 6105.398 kb on - strand, within AO356_26810 at 6105.469 kb on - strand, within AO356_26810 at 6105.521 kb on + strand, within AO356_26810 at 6105.525 kb on + strand, within AO356_26810 at 6105.526 kb on - strand, within AO356_26810 at 6105.526 kb on - strand, within AO356_26810 at 6105.526 kb on - strand, within AO356_26810 at 6105.818 kb on + strand, within AO356_26810 at 6105.819 kb on - strand, within AO356_26810 at 6105.819 kb on - strand, within AO356_26810 at 6105.819 kb on - strand, within AO356_26810 at 6105.865 kb on - strand, within AO356_26810 at 6105.882 kb on + strand, within AO356_26810 at 6105.904 kb on + strand, within AO356_26810 at 6105.904 kb on + strand, within AO356_26810 at 6105.904 kb on + strand, within AO356_26810 at 6105.966 kb on + strand, within AO356_26810 at 6105.966 kb on + strand, within AO356_26810 at 6105.995 kb on + strand, within AO356_26810 at 6106.224 kb on + strand at 6106.224 kb on + strand at 6106.224 kb on + strand at 6106.225 kb on - strand at 6106.235 kb on - strand at 6106.235 kb on - strand at 6106.263 kb on + strand at 6106.263 kb on + strand at 6106.264 kb on - strand at 6106.318 kb on - strand at 6106.446 kb on + strand, within AO356_26815 at 6106.446 kb on + strand, within AO356_26815 at 6106.447 kb on - strand, within AO356_26815 at 6106.483 kb on - strand, within AO356_26815 at 6106.857 kb on + strand, within AO356_26815 at 6107.201 kb on + strand, within AO356_26815
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 6,103,977 - AO356_26800 0.81 +0.4 6,104,021 + AO356_26800 0.84 -1.3 6,104,255 - +0.3 6,104,258 + -0.4 6,104,258 + +0.2 6,104,479 + AO356_26805 0.27 +0.9 6,104,479 + AO356_26805 0.27 +0.0 6,104,494 + AO356_26805 0.30 +1.8 6,104,494 + AO356_26805 0.30 +0.2 6,104,495 - AO356_26805 0.30 +0.9 6,104,694 + AO356_26805 0.70 -0.7 6,104,826 - +0.2 6,104,886 + -0.7 6,104,886 + -0.6 6,104,892 - -0.6 6,104,892 - -1.1 6,105,145 - AO356_26810 0.17 +0.8 6,105,148 + AO356_26810 0.17 +0.9 6,105,398 - AO356_26810 0.36 +0.4 6,105,469 - AO356_26810 0.42 -0.0 6,105,521 + AO356_26810 0.46 -0.4 6,105,525 + AO356_26810 0.46 +1.8 6,105,526 - AO356_26810 0.46 -1.2 6,105,526 - AO356_26810 0.46 +0.1 6,105,526 - AO356_26810 0.46 +0.5 6,105,818 + AO356_26810 0.68 -1.0 6,105,819 - AO356_26810 0.68 +0.8 6,105,819 - AO356_26810 0.68 +0.3 6,105,819 - AO356_26810 0.68 -0.1 6,105,865 - AO356_26810 0.72 -0.2 6,105,882 + AO356_26810 0.73 +0.6 6,105,904 + AO356_26810 0.75 +1.2 6,105,904 + AO356_26810 0.75 +0.7 6,105,904 + AO356_26810 0.75 +0.0 6,105,966 + AO356_26810 0.79 +1.4 6,105,966 + AO356_26810 0.79 +1.1 6,105,995 + AO356_26810 0.81 +0.7 6,106,224 + +0.5 6,106,224 + +0.5 6,106,224 + +0.2 6,106,225 - +0.8 6,106,235 - -0.6 6,106,235 - +0.0 6,106,263 + -0.2 6,106,263 + -0.1 6,106,264 - +1.0 6,106,318 - -0.6 6,106,446 + AO356_26815 0.13 -0.6 6,106,446 + AO356_26815 0.13 -0.3 6,106,447 - AO356_26815 0.13 +0.9 6,106,483 - AO356_26815 0.16 -0.2 6,106,857 + AO356_26815 0.52 -0.7 6,107,201 + AO356_26815 0.84 -0.4
Or see this region's nucleotide sequence