Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22620 and AO356_22625 are separated by 40 nucleotides AO356_22625 and AO356_22630 are separated by 10 nucleotides
AO356_22620: AO356_22620 - ATPase, at 5,054,430 to 5,055,506
_22620
AO356_22625: AO356_22625 - nitrate ABC transporter ATP-binding protein, at 5,055,547 to 5,056,851
_22625
AO356_22630: AO356_22630 - sulfonate ABC transporter permease, at 5,056,862 to 5,058,583
_22630
Position (kb)
5055
5056
5057 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5054.590 kb on + strand, within AO356_22620 at 5054.591 kb on - strand, within AO356_22620 at 5055.205 kb on + strand, within AO356_22620 at 5055.205 kb on + strand, within AO356_22620 at 5055.205 kb on + strand, within AO356_22620 at 5055.205 kb on + strand, within AO356_22620 at 5055.206 kb on - strand, within AO356_22620 at 5055.206 kb on - strand, within AO356_22620 at 5055.534 kb on - strand at 5055.534 kb on - strand at 5055.534 kb on - strand at 5055.536 kb on - strand at 5055.591 kb on - strand at 5055.639 kb on + strand at 5055.640 kb on - strand at 5055.758 kb on + strand, within AO356_22625 at 5055.758 kb on + strand, within AO356_22625 at 5055.758 kb on + strand, within AO356_22625 at 5055.758 kb on + strand, within AO356_22625 at 5055.759 kb on - strand, within AO356_22625 at 5055.759 kb on - strand, within AO356_22625 at 5055.759 kb on - strand, within AO356_22625 at 5055.759 kb on - strand, within AO356_22625 at 5055.759 kb on - strand, within AO356_22625 at 5055.759 kb on - strand, within AO356_22625 at 5055.762 kb on + strand, within AO356_22625 at 5055.762 kb on + strand, within AO356_22625 at 5055.762 kb on + strand, within AO356_22625 at 5055.762 kb on + strand, within AO356_22625 at 5055.763 kb on - strand, within AO356_22625 at 5055.763 kb on - strand, within AO356_22625 at 5055.763 kb on - strand, within AO356_22625 at 5055.763 kb on - strand, within AO356_22625 at 5056.100 kb on + strand, within AO356_22625 at 5056.100 kb on + strand, within AO356_22625 at 5056.100 kb on + strand, within AO356_22625 at 5056.100 kb on + strand, within AO356_22625 at 5056.100 kb on + strand, within AO356_22625 at 5056.101 kb on - strand, within AO356_22625 at 5056.101 kb on - strand, within AO356_22625 at 5056.101 kb on - strand, within AO356_22625 at 5056.101 kb on - strand, within AO356_22625 at 5056.245 kb on + strand, within AO356_22625 at 5056.245 kb on + strand, within AO356_22625 at 5056.333 kb on + strand, within AO356_22625 at 5056.334 kb on - strand, within AO356_22625 at 5056.334 kb on - strand, within AO356_22625 at 5056.334 kb on - strand, within AO356_22625 at 5056.473 kb on + strand, within AO356_22625 at 5056.522 kb on + strand, within AO356_22625 at 5056.797 kb on - strand at 5056.840 kb on + strand at 5056.841 kb on - strand at 5056.841 kb on - strand at 5056.897 kb on - strand at 5056.897 kb on - strand at 5057.025 kb on + strand at 5057.025 kb on + strand at 5057.025 kb on + strand at 5057.025 kb on + strand at 5057.026 kb on - strand at 5057.026 kb on - strand at 5057.026 kb on - strand at 5057.026 kb on - strand at 5057.026 kb on - strand at 5057.112 kb on + strand, within AO356_22630 at 5057.112 kb on + strand, within AO356_22630 at 5057.112 kb on + strand, within AO356_22630 at 5057.112 kb on + strand, within AO356_22630 at 5057.112 kb on + strand, within AO356_22630 at 5057.113 kb on - strand, within AO356_22630 at 5057.113 kb on - strand, within AO356_22630 at 5057.113 kb on - strand, within AO356_22630 at 5057.113 kb on - strand, within AO356_22630 at 5057.113 kb on - strand, within AO356_22630 at 5057.113 kb on - strand, within AO356_22630 at 5057.113 kb on - strand, within AO356_22630 at 5057.113 kb on - strand, within AO356_22630 at 5057.115 kb on + strand, within AO356_22630 at 5057.116 kb on - strand, within AO356_22630 at 5057.241 kb on + strand, within AO356_22630 at 5057.241 kb on + strand, within AO356_22630 at 5057.242 kb on - strand, within AO356_22630 at 5057.242 kb on - strand, within AO356_22630 at 5057.242 kb on - strand, within AO356_22630 at 5057.242 kb on - strand, within AO356_22630 at 5057.242 kb on - strand, within AO356_22630 at 5057.242 kb on - strand, within AO356_22630 at 5057.433 kb on - strand, within AO356_22630 at 5057.433 kb on - strand, within AO356_22630 at 5057.433 kb on - strand, within AO356_22630 at 5057.433 kb on - strand, within AO356_22630 at 5057.494 kb on + strand, within AO356_22630 at 5057.494 kb on + strand, within AO356_22630 at 5057.736 kb on + strand, within AO356_22630 at 5057.736 kb on + strand, within AO356_22630 at 5057.829 kb on + strand, within AO356_22630 at 5057.829 kb on + strand, within AO356_22630 at 5057.829 kb on + strand, within AO356_22630
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 5,054,590 + AO356_22620 0.15 +0.6 5,054,591 - AO356_22620 0.15 -0.0 5,055,205 + AO356_22620 0.72 -0.2 5,055,205 + AO356_22620 0.72 +0.1 5,055,205 + AO356_22620 0.72 -0.8 5,055,205 + AO356_22620 0.72 -0.0 5,055,206 - AO356_22620 0.72 +0.2 5,055,206 - AO356_22620 0.72 +0.4 5,055,534 - +0.2 5,055,534 - +0.2 5,055,534 - -0.2 5,055,536 - -0.2 5,055,591 - +0.7 5,055,639 + +0.4 5,055,640 - -0.4 5,055,758 + AO356_22625 0.16 -0.6 5,055,758 + AO356_22625 0.16 -1.0 5,055,758 + AO356_22625 0.16 +0.3 5,055,758 + AO356_22625 0.16 -1.5 5,055,759 - AO356_22625 0.16 +0.7 5,055,759 - AO356_22625 0.16 -0.4 5,055,759 - AO356_22625 0.16 -1.3 5,055,759 - AO356_22625 0.16 -0.3 5,055,759 - AO356_22625 0.16 -0.5 5,055,759 - AO356_22625 0.16 +0.9 5,055,762 + AO356_22625 0.16 +0.1 5,055,762 + AO356_22625 0.16 +0.6 5,055,762 + AO356_22625 0.16 +0.3 5,055,762 + AO356_22625 0.16 +0.3 5,055,763 - AO356_22625 0.17 -1.2 5,055,763 - AO356_22625 0.17 -0.3 5,055,763 - AO356_22625 0.17 +0.8 5,055,763 - AO356_22625 0.17 +1.4 5,056,100 + AO356_22625 0.42 +0.8 5,056,100 + AO356_22625 0.42 -1.1 5,056,100 + AO356_22625 0.42 +0.6 5,056,100 + AO356_22625 0.42 +0.0 5,056,100 + AO356_22625 0.42 -0.1 5,056,101 - AO356_22625 0.42 -0.4 5,056,101 - AO356_22625 0.42 +0.0 5,056,101 - AO356_22625 0.42 -1.2 5,056,101 - AO356_22625 0.42 -0.8 5,056,245 + AO356_22625 0.53 +0.4 5,056,245 + AO356_22625 0.53 -0.3 5,056,333 + AO356_22625 0.60 -0.1 5,056,334 - AO356_22625 0.60 +0.5 5,056,334 - AO356_22625 0.60 -0.1 5,056,334 - AO356_22625 0.60 +0.0 5,056,473 + AO356_22625 0.71 -0.4 5,056,522 + AO356_22625 0.75 -3.1 5,056,797 - +0.3 5,056,840 + +0.3 5,056,841 - +0.2 5,056,841 - +0.0 5,056,897 - -0.3 5,056,897 - +1.3 5,057,025 + +1.1 5,057,025 + -0.8 5,057,025 + -1.3 5,057,025 + -1.2 5,057,026 - -1.1 5,057,026 - +0.5 5,057,026 - +1.0 5,057,026 - +0.4 5,057,026 - -0.3 5,057,112 + AO356_22630 0.15 -0.2 5,057,112 + AO356_22630 0.15 -0.6 5,057,112 + AO356_22630 0.15 -0.1 5,057,112 + AO356_22630 0.15 -0.3 5,057,112 + AO356_22630 0.15 -0.1 5,057,113 - AO356_22630 0.15 -0.1 5,057,113 - AO356_22630 0.15 -0.9 5,057,113 - AO356_22630 0.15 -0.2 5,057,113 - AO356_22630 0.15 -0.2 5,057,113 - AO356_22630 0.15 -0.2 5,057,113 - AO356_22630 0.15 +0.5 5,057,113 - AO356_22630 0.15 -0.6 5,057,113 - AO356_22630 0.15 -1.1 5,057,115 + AO356_22630 0.15 -0.1 5,057,116 - AO356_22630 0.15 +0.2 5,057,241 + AO356_22630 0.22 -2.2 5,057,241 + AO356_22630 0.22 -0.8 5,057,242 - AO356_22630 0.22 +0.2 5,057,242 - AO356_22630 0.22 +0.0 5,057,242 - AO356_22630 0.22 -0.3 5,057,242 - AO356_22630 0.22 +1.0 5,057,242 - AO356_22630 0.22 -1.4 5,057,242 - AO356_22630 0.22 -0.3 5,057,433 - AO356_22630 0.33 -0.4 5,057,433 - AO356_22630 0.33 +1.0 5,057,433 - AO356_22630 0.33 +0.9 5,057,433 - AO356_22630 0.33 -0.7 5,057,494 + AO356_22630 0.37 +0.1 5,057,494 + AO356_22630 0.37 -0.7 5,057,736 + AO356_22630 0.51 -0.7 5,057,736 + AO356_22630 0.51 -0.8 5,057,829 + AO356_22630 0.56 +0.6 5,057,829 + AO356_22630 0.56 +0.1 5,057,829 + AO356_22630 0.56 +0.4
Or see this region's nucleotide sequence