Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_04190

Experiment: D-Galactose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_04185 and AO356_04190 are separated by 936 nucleotidesAO356_04190 and AO356_04195 are separated by 324 nucleotides AO356_04185: AO356_04185 - transposase, at 938,197 to 938,898 _04185 AO356_04190: AO356_04190 - hypothetical protein, at 939,835 to 940,104 _04190 AO356_04195: AO356_04195 - adhesin, at 940,429 to 953,463 _04195 Position (kb) 939 940 941Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 938.852 kb on - strandat 938.852 kb on - strandat 938.880 kb on + strandat 938.880 kb on + strandat 938.881 kb on - strandat 938.898 kb on + strandat 938.899 kb on - strandat 938.932 kb on - strandat 939.027 kb on + strandat 939.084 kb on - strandat 939.110 kb on - strandat 939.111 kb on + strandat 939.186 kb on - strandat 939.186 kb on - strandat 939.399 kb on - strandat 939.561 kb on + strandat 939.562 kb on - strandat 939.562 kb on - strandat 939.562 kb on - strandat 939.626 kb on + strandat 939.650 kb on - strandat 939.674 kb on + strandat 939.683 kb on - strandat 939.774 kb on - strandat 940.122 kb on - strandat 940.290 kb on + strandat 940.365 kb on - strandat 940.369 kb on + strandat 940.406 kb on + strandat 940.432 kb on + strandat 940.432 kb on + strandat 940.471 kb on + strandat 940.471 kb on + strandat 940.472 kb on - strandat 940.530 kb on + strandat 940.534 kb on + strandat 940.534 kb on + strandat 940.535 kb on - strandat 940.535 kb on - strandat 940.535 kb on - strandat 940.546 kb on + strandat 940.546 kb on + strandat 940.546 kb on + strandat 940.547 kb on - strandat 940.549 kb on + strandat 940.596 kb on + strandat 940.597 kb on - strandat 940.597 kb on - strandat 940.623 kb on + strandat 940.623 kb on + strandat 940.623 kb on + strandat 940.624 kb on - strandat 940.624 kb on - strandat 940.624 kb on - strandat 940.624 kb on - strandat 940.624 kb on - strandat 940.624 kb on - strandat 940.624 kb on - strandat 940.694 kb on + strandat 940.695 kb on - strandat 940.779 kb on + strandat 940.780 kb on - strandat 941.041 kb on + strandat 941.041 kb on + strandat 941.041 kb on + strandat 941.041 kb on + strandat 941.042 kb on - strandat 941.042 kb on - strandat 941.042 kb on - strandat 941.042 kb on - strandat 941.042 kb on - strandat 941.042 kb on - strandat 941.042 kb on - strandat 941.042 kb on - strandat 941.042 kb on - strandat 941.058 kb on + strandat 941.058 kb on + strandat 941.058 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Galactose (C)
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938,852 - -0.9
938,852 - +0.8
938,880 + -0.1
938,880 + -0.0
938,881 - +1.3
938,898 + +0.7
938,899 - -0.0
938,932 - +0.3
939,027 + +0.6
939,084 - +0.6
939,110 - +0.1
939,111 + -0.1
939,186 - -0.8
939,186 - +0.3
939,399 - +0.3
939,561 + +0.7
939,562 - -0.4
939,562 - +0.5
939,562 - +0.3
939,626 + +0.1
939,650 - +0.1
939,674 + +0.5
939,683 - +0.6
939,774 - +0.4
940,122 - +0.8
940,290 + -2.0
940,365 - +0.3
940,369 + -2.6
940,406 + -3.5
940,432 + -1.8
940,432 + -2.8
940,471 + -3.5
940,471 + -3.0
940,472 - +1.2
940,530 + -3.7
940,534 + -3.3
940,534 + -4.0
940,535 - +1.2
940,535 - -0.5
940,535 - +0.1
940,546 + -0.6
940,546 + -1.9
940,546 + -3.3
940,547 - +0.1
940,549 + -3.9
940,596 + -0.1
940,597 - +0.1
940,597 - +0.1
940,623 + -0.5
940,623 + -1.6
940,623 + -0.1
940,624 - -0.3
940,624 - +0.3
940,624 - +0.4
940,624 - +0.2
940,624 - -0.7
940,624 - -0.7
940,624 - -0.2
940,694 + -1.0
940,695 - -0.1
940,779 + -0.9
940,780 - -0.3
941,041 + -0.5
941,041 + -0.3
941,041 + -0.2
941,041 + -0.5
941,042 - -0.1
941,042 - +0.5
941,042 - +1.3
941,042 - -0.5
941,042 - -0.5
941,042 - +0.5
941,042 - -0.2
941,042 - +0.1
941,042 - -0.2
941,058 + -0.4
941,058 + -0.3
941,058 + +0.4

Or see this region's nucleotide sequence