Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37525

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,895,737	+		RR42_RS37520	0.44	-0.3
3,896,143	+		RR42_RS37520	0.74	-0.9
3,896,143	+		RR42_RS37520	0.74	-0.4
3,896,144	-		RR42_RS37520	0.74	-0.1
3,896,144	-		RR42_RS37520	0.74	-0.3
3,896,179	+		RR42_RS37520	0.76	-0.4
3,896,179	+		RR42_RS37520	0.76	-0.4
3,896,191	+		RR42_RS37520	0.77	+0.8
3,896,191	+		RR42_RS37520	0.77	-0.6
3,896,191	+		RR42_RS37520	0.77	-1.1
3,896,192	-		RR42_RS37520	0.77	+0.5
3,896,192	-		RR42_RS37520	0.77	-0.5
3,896,200	-		RR42_RS37520	0.78	+0.4
3,896,269	+		RR42_RS37520	0.83	+1.0
3,896,269	+		RR42_RS37520	0.83	+0.2
3,896,269	+		RR42_RS37520	0.83	-0.4
3,896,270	-		RR42_RS37520	0.83	-2.4
3,896,311	+		RR42_RS37520	0.86	+0.5
3,896,311	+		RR42_RS37520	0.86	+0.0
3,896,311	+		RR42_RS37520	0.86	+0.6
3,896,312	-		RR42_RS37520	0.86	+0.2
3,896,369	+				+0.5
3,896,437	+				-0.7
3,896,437	+				-0.1
3,896,505	-				+0.4
3,896,505	-				-1.4
3,896,707	+		RR42_RS37525	0.16	-0.4
3,896,708	-		RR42_RS37525	0.17	-1.4
3,896,708	-		RR42_RS37525	0.17	+0.6
3,896,708	-		RR42_RS37525	0.17	-0.8
3,896,782	-		RR42_RS37525	0.32	-0.0
3,896,784	+		RR42_RS37525	0.33	-0.3
3,896,784	+		RR42_RS37525	0.33	+0.4
3,896,785	-		RR42_RS37525	0.33	-1.4
3,896,785	-		RR42_RS37525	0.33	+1.0
3,896,785	-		RR42_RS37525	0.33	-0.7
3,896,797	-		RR42_RS37525	0.35	-1.0
3,896,797	-		RR42_RS37525	0.35	-0.7
3,896,797	-		RR42_RS37525	0.35	+0.2
3,896,947	+		RR42_RS37525	0.67	-0.4
3,896,947	+		RR42_RS37525	0.67	-1.8
3,896,948	-		RR42_RS37525	0.68	-0.9
3,896,948	-		RR42_RS37525	0.68	-2.0
3,896,951	-		RR42_RS37525	0.68	+2.6
3,896,951	-		RR42_RS37525	0.68	-0.6
3,896,951	-		RR42_RS37525	0.68	-0.5
3,897,046	+		RR42_RS37525	0.88	-0.4
3,897,046	+		RR42_RS37525	0.88	-0.1
3,897,046	+		RR42_RS37525	0.88	-0.3
3,897,047	-		RR42_RS37525	0.89	+0.3
3,897,134	-				-0.5
3,897,160	+				+0.4
3,897,166	+				+0.7
3,897,167	-				-0.0
3,897,290	+				+0.0
3,897,387	+				-1.5
3,897,388	-				-0.8
3,897,401	+				-0.0
3,897,401	+				+1.7
3,897,402	-				-0.1
3,897,425	+				-1.4
3,897,431	+				-0.7
3,897,431	+				-1.7
3,897,431	+				-0.0
3,897,432	-				-0.5
3,897,443	+				-0.8
3,897,444	-				+0.4
3,897,456	+				-1.3
3,897,457	-				-0.8
3,897,457	-				-0.5
3,897,457	-				-1.8
3,897,470	+				-0.6
3,897,549	+		RR42_RS37530	0.13	-1.8
3,897,705	+		RR42_RS37530	0.56	+1.6
3,897,706	-		RR42_RS37530	0.57	+0.1
3,897,718	-		RR42_RS37530	0.60	+0.8
3,897,767	+		RR42_RS37530	0.74	-0.4
3,897,767	+		RR42_RS37530	0.74	-1.3
3,897,767	+		RR42_RS37530	0.74	-1.4
3,897,767	+		RR42_RS37530	0.74	-1.1
3,897,767	+		RR42_RS37530	0.74	+1.3
3,897,767	+		RR42_RS37530	0.74	-0.1
3,897,966	+				-0.8
3,897,966	+				-0.9
3,897,993	+				-0.3
3,897,994	-				-1.4
3,897,994	-				-1.1
3,898,036	+				-0.7
3,898,037	-				-0.0
3,898,037	-				-0.1