Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37290

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,836,567	+		RR42_RS37285	0.48	+0.2
3,836,569	-		RR42_RS37285	0.48	+0.6
3,836,569	-		RR42_RS37285	0.48	+0.1
3,836,569	-		RR42_RS37285	0.48	-1.5
3,836,628	-		RR42_RS37285	0.55	+0.0
3,836,711	-		RR42_RS37285	0.64	+1.1
3,836,711	-		RR42_RS37285	0.64	-0.7
3,836,772	+		RR42_RS37285	0.70	-0.8
3,836,773	-		RR42_RS37285	0.70	+0.2
3,836,805	+		RR42_RS37285	0.74	-0.2
3,836,805	+		RR42_RS37285	0.74	+2.0
3,836,805	+		RR42_RS37285	0.74	-0.2
3,836,805	+		RR42_RS37285	0.74	-0.9
3,836,805	+		RR42_RS37285	0.74	+0.0
3,836,805	+		RR42_RS37285	0.74	+0.3
3,836,805	+		RR42_RS37285	0.74	-1.1
3,836,805	+		RR42_RS37285	0.74	-1.7
3,836,805	+		RR42_RS37285	0.74	+0.6
3,836,805	+		RR42_RS37285	0.74	+0.8
3,836,805	+		RR42_RS37285	0.74	-0.4
3,836,806	-		RR42_RS37285	0.74	-0.2
3,836,806	-		RR42_RS37285	0.74	+0.2
3,836,806	-		RR42_RS37285	0.74	+0.2
3,837,166	+				-0.9
3,837,175	+				-1.5
3,837,232	+				-0.4
3,837,232	+				+0.6
3,837,233	-				-1.3
3,837,371	+				+0.2
3,837,372	-				-0.9
3,837,373	+				+0.8
3,837,373	+				-0.6
3,837,374	-				-0.8
3,837,443	+				-1.0
3,837,443	+				+1.6
3,837,444	-				-0.2
3,837,454	+		RR42_RS37290	0.11	-0.9
3,837,454	+		RR42_RS37290	0.11	+0.0
3,837,454	+		RR42_RS37290	0.11	+0.7
3,837,454	+		RR42_RS37290	0.11	+0.8
3,837,454	+		RR42_RS37290	0.11	+0.6
3,837,455	-		RR42_RS37290	0.12	+0.6
3,837,455	-		RR42_RS37290	0.12	-0.3
3,837,455	-		RR42_RS37290	0.12	+0.5
3,837,521	-		RR42_RS37290	0.32	+1.2
3,837,583	+		RR42_RS37290	0.52	+2.0
3,837,583	+		RR42_RS37290	0.52	+0.5
3,837,583	+		RR42_RS37290	0.52	+0.7
3,837,583	+		RR42_RS37290	0.52	+0.1
3,837,584	-		RR42_RS37290	0.52	+1.2
3,837,584	-		RR42_RS37290	0.52	-0.4
3,837,584	-		RR42_RS37290	0.52	+0.5
3,837,622	+		RR42_RS37290	0.64	+0.5
3,837,622	+		RR42_RS37290	0.64	+1.2
3,837,622	+		RR42_RS37290	0.64	-1.6
3,837,622	+		RR42_RS37290	0.64	+0.1
3,837,623	-		RR42_RS37290	0.64	-0.9
3,837,685	+		RR42_RS37290	0.84	-0.9
3,837,685	+		RR42_RS37290	0.84	-0.8
3,837,841	+				+0.1
3,837,841	+				-0.3
3,838,005	+				-1.8
3,838,057	+				-0.0
3,838,057	+				+3.0
3,838,057	+				-0.5
3,838,058	-				+0.7
3,838,058	-				-0.3
3,838,058	-				+1.1
3,838,162	+		RR42_RS37295	0.10	+0.6
3,838,162	+		RR42_RS37295	0.10	-1.9
3,838,231	+		RR42_RS37295	0.17	-0.1
3,838,231	+		RR42_RS37295	0.17	-0.4
3,838,232	-		RR42_RS37295	0.17	-0.5
3,838,399	+		RR42_RS37295	0.34	+0.1
3,838,400	-		RR42_RS37295	0.34	-1.3
3,838,471	+		RR42_RS37295	0.41	+1.2
3,838,504	+		RR42_RS37295	0.44	-0.9
3,838,504	+		RR42_RS37295	0.44	+0.6
3,838,504	+		RR42_RS37295	0.44	+0.5
3,838,504	+		RR42_RS37295	0.44	-0.2
3,838,504	+		RR42_RS37295	0.44	-0.7
3,838,504	+		RR42_RS37295	0.44	+2.2
3,838,505	-		RR42_RS37295	0.44	+0.6
3,838,505	-		RR42_RS37295	0.44	+1.4
3,838,505	-		RR42_RS37295	0.44	+0.1
3,838,607	-		RR42_RS37295	0.54	-0.9
3,838,698	+		RR42_RS37295	0.63	-1.2
3,838,698	+		RR42_RS37295	0.63	+0.0
3,838,699	-		RR42_RS37295	0.63	+1.6
3,838,699	-		RR42_RS37295	0.63	+0.5