Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37045

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,767,254	-		RR42_RS37040	0.59	-1.0
3,767,424	+		RR42_RS37040	0.70	-1.3
3,767,425	-		RR42_RS37040	0.70	+1.6
3,767,425	-		RR42_RS37040	0.70	-0.7
3,767,425	-		RR42_RS37040	0.70	+0.9
3,767,433	+		RR42_RS37040	0.70	+1.0
3,767,463	+		RR42_RS37040	0.72	-0.3
3,767,706	+		RR42_RS37040	0.88	-0.7
3,767,707	-		RR42_RS37040	0.88	-0.4
3,767,741	+		RR42_RS37040	0.90	+0.7
3,767,742	-		RR42_RS37040	0.90	+1.1
3,767,805	+				+1.1
3,767,805	+				+3.6
3,767,805	+				-1.1
3,767,806	-				+0.2
3,767,810	+				+1.2
3,767,959	+				-0.4
3,767,959	+				+0.1
3,767,960	-				+1.3
3,768,512	+		RR42_RS37045	0.45	+1.6
3,768,513	-		RR42_RS37045	0.45	+0.3
3,769,065	+				-0.4
3,769,066	-				-1.7
3,769,066	-				-0.1
3,769,066	-				+1.6
3,769,123	-				+0.1
3,769,238	+				+0.2
3,769,238	+				-0.3
3,769,238	+				+0.7
3,769,238	+				-1.4
3,769,288	+				+1.1
3,769,327	+				+1.1
3,769,328	-				+1.1
3,769,328	-				-0.2
3,769,328	-				-1.0
3,769,396	+		RR42_RS37050	0.12	+1.0
3,769,396	+		RR42_RS37050	0.12	-0.8
3,769,396	+		RR42_RS37050	0.12	-0.6
3,769,396	+		RR42_RS37050	0.12	-1.1
3,769,396	+		RR42_RS37050	0.12	+0.6
3,769,396	+		RR42_RS37050	0.12	-0.8
3,769,397	-		RR42_RS37050	0.12	+1.6
3,769,397	-		RR42_RS37050	0.12	-2.0
3,769,397	-		RR42_RS37050	0.12	+1.6
3,769,397	-		RR42_RS37050	0.12	+0.5
3,769,397	-		RR42_RS37050	0.12	+0.3
3,769,397	-		RR42_RS37050	0.12	-0.4
3,769,448	+		RR42_RS37050	0.18	-0.3
3,769,449	-		RR42_RS37050	0.19	-0.8
3,769,449	-		RR42_RS37050	0.19	+1.3
3,769,503	+		RR42_RS37050	0.25	+0.8
3,769,774	+		RR42_RS37050	0.58	-0.4
3,769,774	+		RR42_RS37050	0.58	-1.2
3,769,774	+		RR42_RS37050	0.58	-0.3
3,769,775	-		RR42_RS37050	0.58	-0.2
3,769,775	-		RR42_RS37050	0.58	+1.0
3,769,775	-		RR42_RS37050	0.58	-0.8
3,769,813	+		RR42_RS37050	0.63	-0.2
3,769,813	+		RR42_RS37050	0.63	+0.2
3,769,813	+		RR42_RS37050	0.63	-0.0
3,769,813	+		RR42_RS37050	0.63	-0.9
3,769,813	+		RR42_RS37050	0.63	-0.7
3,769,813	+		RR42_RS37050	0.63	-0.9
3,769,814	-		RR42_RS37050	0.63	+0.3
3,769,814	-		RR42_RS37050	0.63	+0.1
3,769,919	+		RR42_RS37050	0.76	+2.6
3,769,920	-		RR42_RS37050	0.76	-2.1
3,769,949	-		RR42_RS37050	0.79	+0.3