Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36960

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,745,871	+		RR42_RS36955	0.35	+0.2
3,745,871	+		RR42_RS36955	0.35	-0.8
3,745,950	+		RR42_RS36955	0.41	+1.2
3,745,950	+		RR42_RS36955	0.41	+1.0
3,745,951	-		RR42_RS36955	0.41	+0.7
3,746,019	-		RR42_RS36955	0.46	+0.9
3,746,235	-		RR42_RS36955	0.62	+1.6
3,746,235	-		RR42_RS36955	0.62	-0.4
3,746,302	+		RR42_RS36955	0.67	-0.1
3,746,303	-		RR42_RS36955	0.67	+2.1
3,746,303	-		RR42_RS36955	0.67	+0.2
3,746,313	-		RR42_RS36955	0.68	+0.1
3,746,389	+		RR42_RS36955	0.74	-1.7
3,746,390	-		RR42_RS36955	0.74	+0.6
3,746,555	+		RR42_RS36955	0.86	-1.5
3,746,555	+		RR42_RS36955	0.86	+0.1
3,746,594	+		RR42_RS36955	0.89	-0.1
3,747,076	-		RR42_RS36960	0.18	-0.4
3,747,180	+		RR42_RS36960	0.26	-0.3
3,747,181	-		RR42_RS36960	0.26	-0.3
3,747,207	+		RR42_RS36960	0.28	+1.0
3,747,351	+		RR42_RS36960	0.39	+0.7
3,747,351	+		RR42_RS36960	0.39	-1.8
3,747,525	+		RR42_RS36960	0.53	+0.2
3,747,703	+		RR42_RS36960	0.66	-0.4
3,747,793	-		RR42_RS36960	0.73	+2.6
3,748,005	+		RR42_RS36960	0.89	+0.2
3,748,006	-		RR42_RS36960	0.89	-0.4
3,748,006	-		RR42_RS36960	0.89	-1.0
3,748,009	-		RR42_RS36960	0.90	-2.3
3,748,009	-		RR42_RS36960	0.90	-0.7
3,748,011	+		RR42_RS36960	0.90	-0.4
3,748,011	+		RR42_RS36960	0.90	-0.6
3,748,012	-				-0.8
3,748,012	-				+0.4
3,748,141	-				+0.1
3,748,141	-				-0.8
3,748,292	+				-1.0
3,748,395	-		RR42_RS36965	0.13	+0.6
3,748,517	+		RR42_RS36965	0.19	+0.3
3,748,518	-		RR42_RS36965	0.19	-0.8
3,748,536	+		RR42_RS36965	0.20	-0.3
3,748,655	+		RR42_RS36965	0.26	+0.7
3,748,655	+		RR42_RS36965	0.26	+0.6
3,748,718	-		RR42_RS36965	0.29	+0.1
3,748,751	+		RR42_RS36965	0.31	-0.4
3,748,751	+		RR42_RS36965	0.31	+0.4
3,748,752	-		RR42_RS36965	0.31	-0.0
3,748,839	+		RR42_RS36965	0.35	-0.1
3,748,860	-		RR42_RS36965	0.36	+0.4
3,748,862	+		RR42_RS36965	0.36	+1.1
3,748,862	+		RR42_RS36965	0.36	-0.0
3,748,862	+		RR42_RS36965	0.36	-0.0
3,748,883	+		RR42_RS36965	0.37	-1.6
3,748,883	+		RR42_RS36965	0.37	-0.1
3,748,984	+		RR42_RS36965	0.42	-0.4
3,749,056	+		RR42_RS36965	0.46	-1.0
3,749,070	-		RR42_RS36965	0.47	+0.6
3,749,090	+		RR42_RS36965	0.48	+1.2
3,749,091	-		RR42_RS36965	0.48	+0.3
3,749,091	-		RR42_RS36965	0.48	+0.2
3,749,091	-		RR42_RS36965	0.48	-0.0