Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36670

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,682,262	+		RR42_RS36665	0.65	-0.3
3,682,262	+		RR42_RS36665	0.65	-0.4
3,682,262	+		RR42_RS36665	0.65	-0.8
3,682,263	-		RR42_RS36665	0.65	-1.1
3,682,263	-		RR42_RS36665	0.65	+0.1
3,682,306	+		RR42_RS36665	0.70	+1.5
3,682,306	+		RR42_RS36665	0.70	+0.4
3,682,306	+		RR42_RS36665	0.70	-2.0
3,682,306	+		RR42_RS36665	0.70	-0.8
3,682,307	-		RR42_RS36665	0.70	-1.8
3,682,354	+		RR42_RS36665	0.75	-1.0
3,682,355	-		RR42_RS36665	0.75	-1.5
3,682,370	+		RR42_RS36665	0.76	-1.0
3,682,370	+		RR42_RS36665	0.76	+2.5
3,682,371	-		RR42_RS36665	0.76	-0.3
3,682,371	-		RR42_RS36665	0.76	-0.2
3,682,598	+				-0.9
3,682,598	+				+1.5
3,682,612	+				-0.3
3,682,807	+				-0.2
3,682,807	+				+1.2
3,682,888	+				-1.1
3,682,889	-				-0.2
3,682,889	-				+0.1
3,682,905	+				-0.2
3,682,906	-				-1.4
3,682,906	-				+1.2
3,682,906	-				-0.2
3,682,908	+				-0.5
3,682,908	+				-1.4
3,682,908	+				-0.5
3,682,909	-				+1.2
3,682,909	-				-0.6
3,682,909	-				-0.7
3,682,909	-				+0.8
3,682,909	-				-0.2
3,682,909	-				+1.2
3,682,924	+				-0.2
3,682,924	+				+1.0
3,682,984	+				+1.0
3,682,985	-				+1.0
3,682,985	-				+1.2
3,682,985	-				-0.1
3,682,985	-				+0.8
3,682,985	-				-0.1
3,683,139	+				-0.8
3,683,139	+				-1.4
3,683,140	-				+0.7
3,683,206	-				+0.3
3,683,206	-				+1.5
3,683,230	-				-0.8
3,683,230	-				+1.5
3,683,631	+		RR42_RS36670	0.29	+0.5
3,683,631	+		RR42_RS36670	0.29	+0.6
3,683,631	+		RR42_RS36670	0.29	+2.1
3,683,631	+		RR42_RS36670	0.29	-0.3
3,683,631	+		RR42_RS36670	0.29	-0.5
3,683,631	+		RR42_RS36670	0.29	-0.0
3,683,631	+		RR42_RS36670	0.29	+1.0
3,683,632	-		RR42_RS36670	0.29	+0.1
3,683,632	-		RR42_RS36670	0.29	-0.7
3,683,632	-		RR42_RS36670	0.29	+0.2
3,683,632	-		RR42_RS36670	0.29	+0.4
3,683,632	-		RR42_RS36670	0.29	+1.2
3,683,632	-		RR42_RS36670	0.29	-0.5
3,683,632	-		RR42_RS36670	0.29	+0.5
3,683,755	+		RR42_RS36670	0.38	+0.1
3,683,755	+		RR42_RS36670	0.38	-2.1
3,683,898	-		RR42_RS36670	0.47	-0.1
3,683,943	+		RR42_RS36670	0.50	+1.0
3,683,943	+		RR42_RS36670	0.50	+0.2
3,683,944	-		RR42_RS36670	0.51	-0.1
3,683,952	+		RR42_RS36670	0.51	-0.9
3,683,952	+		RR42_RS36670	0.51	-0.1
3,683,952	+		RR42_RS36670	0.51	-1.1
3,683,952	+		RR42_RS36670	0.51	-0.9
3,683,953	-		RR42_RS36670	0.51	+0.5
3,683,953	-		RR42_RS36670	0.51	-1.5
3,683,970	+		RR42_RS36670	0.52	+0.4
3,683,971	-		RR42_RS36670	0.52	-1.6
3,683,971	-		RR42_RS36670	0.52	-2.3
3,684,041	-		RR42_RS36670	0.57	+1.7
3,684,041	-		RR42_RS36670	0.57	+2.7
3,684,041	-		RR42_RS36670	0.57	-0.3
3,684,042	+		RR42_RS36670	0.57	-1.4
3,684,042	+		RR42_RS36670	0.57	-0.9
3,684,042	+		RR42_RS36670	0.57	-0.6
3,684,042	+		RR42_RS36670	0.57	+0.1
3,684,042	+		RR42_RS36670	0.57	+0.1
3,684,042	+		RR42_RS36670	0.57	-0.2
3,684,042	+		RR42_RS36670	0.57	+1.0
3,684,042	+		RR42_RS36670	0.57	-0.9
3,684,042	+		RR42_RS36670	0.57	+1.0
3,684,043	-		RR42_RS36670	0.57	+0.5
3,684,043	-		RR42_RS36670	0.57	+1.0
3,684,043	-		RR42_RS36670	0.57	+0.8
3,684,043	-		RR42_RS36670	0.57	+1.2
3,684,222	+		RR42_RS36670	0.69	+0.5
3,684,222	+		RR42_RS36670	0.69	-0.3
3,684,331	+		RR42_RS36670	0.77	+0.4
3,684,331	+		RR42_RS36670	0.77	+0.2
3,684,332	-		RR42_RS36670	0.77	+0.3
3,684,518	+		RR42_RS36670	0.89	+0.4
3,684,547	+				-0.1
3,684,667	+				+0.2
3,684,667	+				-1.5
3,684,716	+				-0.8
3,684,716	+				+1.9
3,684,716	+				-0.8
3,684,717	-				+1.9
3,684,717	-				-0.6
3,684,717	-				-0.1
3,684,717	-				+0.1
3,684,768	-				+0.0
3,684,827	+				-1.5
3,684,827	+				-0.0
3,684,827	+				+2.5
3,684,827	+				+0.8
3,684,828	-				+2.5
3,684,828	-				-1.5
3,684,828	-				-0.0
3,684,828	-				+0.2
3,685,079	+		RR42_RS36675	0.33	-0.8
3,685,079	+		RR42_RS36675	0.33	+0.9
3,685,079	+		RR42_RS36675	0.33	+0.9
3,685,079	+		RR42_RS36675	0.33	-0.3
3,685,079	+		RR42_RS36675	0.33	-0.1
3,685,080	-		RR42_RS36675	0.33	+0.7
3,685,206	+		RR42_RS36675	0.49	-1.2
3,685,206	+		RR42_RS36675	0.49	+1.1
3,685,207	-		RR42_RS36675	0.49	+0.5
3,685,289	-		RR42_RS36675	0.60	-1.2
3,685,289	-		RR42_RS36675	0.60	+0.5