Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36390

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,617,541	-		RR42_RS36385	0.59	+1.0
3,617,708	+		RR42_RS36385	0.69	-0.1
3,617,708	+		RR42_RS36385	0.69	-0.0
3,617,708	+		RR42_RS36385	0.69	-0.9
3,617,708	+		RR42_RS36385	0.69	+0.1
3,617,709	-		RR42_RS36385	0.69	-0.2
3,617,957	+		RR42_RS36385	0.86	-0.7
3,617,957	+		RR42_RS36385	0.86	-0.9
3,617,958	-		RR42_RS36385	0.86	+0.6
3,617,958	-		RR42_RS36385	0.86	-0.0
3,617,958	-		RR42_RS36385	0.86	+0.4
3,618,108	+				-0.6
3,618,109	-				+0.0
3,618,434	+				+0.4
3,618,542	+				-0.5
3,618,542	+				+0.5
3,618,543	-				+1.4
3,618,543	-				+0.1
3,618,543	-				-0.9
3,618,734	+		RR42_RS36390	0.23	-0.2
3,618,734	+		RR42_RS36390	0.23	+0.4
3,618,735	-		RR42_RS36390	0.23	+0.6
3,618,735	-		RR42_RS36390	0.23	-0.8
3,618,743	-		RR42_RS36390	0.24	+0.0
3,618,866	+		RR42_RS36390	0.34	-1.6
3,618,882	+		RR42_RS36390	0.36	-0.3
3,619,102	-		RR42_RS36390	0.55	+0.1
3,619,331	+		RR42_RS36390	0.75	-0.3
3,619,331	+		RR42_RS36390	0.75	+0.4
3,619,331	+		RR42_RS36390	0.75	+1.0
3,619,331	+		RR42_RS36390	0.75	-1.2
3,619,331	+		RR42_RS36390	0.75	-0.5
3,619,332	-		RR42_RS36390	0.75	+0.5
3,619,332	-		RR42_RS36390	0.75	+0.5
3,619,601	+				+0.2
3,619,601	+				-2.1
3,619,780	+				+1.2
3,619,861	+		RR42_RS36395	0.16	+1.2
3,619,861	+		RR42_RS36395	0.16	-0.5
3,619,861	+		RR42_RS36395	0.16	-0.4
3,619,862	-		RR42_RS36395	0.16	-0.3
3,619,895	-		RR42_RS36395	0.19	+0.7
3,620,134	+		RR42_RS36395	0.38	-0.9
3,620,134	+		RR42_RS36395	0.38	+0.4
3,620,134	+		RR42_RS36395	0.38	+0.3
3,620,134	+		RR42_RS36395	0.38	-1.5
3,620,134	+		RR42_RS36395	0.38	-2.6
3,620,134	+		RR42_RS36395	0.38	-1.6
3,620,135	-		RR42_RS36395	0.38	-1.3
3,620,135	-		RR42_RS36395	0.38	-0.9
3,620,401	+		RR42_RS36395	0.59	+0.7
3,620,401	+		RR42_RS36395	0.59	+1.2
3,620,402	-		RR42_RS36395	0.60	-0.6
3,620,440	+		RR42_RS36395	0.63	+0.2