Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36305

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,597,531	+				-0.8
3,597,714	+		RR42_RS36300	0.31	+0.3
3,597,714	+		RR42_RS36300	0.31	+0.5
3,597,715	-		RR42_RS36300	0.31	+0.9
3,597,727	-		RR42_RS36300	0.32	+0.3
3,597,727	-		RR42_RS36300	0.32	+0.9
3,597,892	-		RR42_RS36300	0.53	+0.8
3,598,003	-		RR42_RS36300	0.66	+0.1
3,598,041	+		RR42_RS36300	0.71	+1.1
3,598,332	+				+0.8
3,598,659	-		RR42_RS36305	0.33	+1.0
3,598,659	-		RR42_RS36305	0.33	-0.1
3,598,659	-		RR42_RS36305	0.33	-0.2
3,598,659	-		RR42_RS36305	0.33	+0.3
3,599,242	+				+0.5
3,599,273	+				-1.8
3,599,273	+				+0.6
3,599,274	-				+2.3
3,599,475	-		RR42_RS36310	0.21	+1.2
3,599,475	-		RR42_RS36310	0.21	-0.3
3,599,475	-		RR42_RS36310	0.21	+0.5
3,599,518	+		RR42_RS36310	0.25	-1.0
3,599,518	+		RR42_RS36310	0.25	-0.0
3,599,519	-		RR42_RS36310	0.25	+0.3
3,599,519	-		RR42_RS36310	0.25	+0.9
3,599,596	+		RR42_RS36310	0.33	+0.5
3,599,597	-		RR42_RS36310	0.33	+0.9
3,599,719	+		RR42_RS36310	0.45	+2.9
3,599,720	-		RR42_RS36310	0.45	+2.1
3,599,794	+		RR42_RS36310	0.53	+2.1
3,599,795	-		RR42_RS36310	0.53	+1.2
3,599,810	-		RR42_RS36310	0.54	+0.3
3,599,858	+		RR42_RS36310	0.59	+1.2
3,599,858	+		RR42_RS36310	0.59	+0.5
3,599,859	-		RR42_RS36310	0.59	+0.2
3,600,028	+		RR42_RS36310	0.76	-0.5
3,600,029	-		RR42_RS36310	0.76	-0.7
3,600,029	-		RR42_RS36310	0.76	-0.4
3,600,029	-		RR42_RS36310	0.76	+2.5