Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36205

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,570,859	+		RR42_RS36200	0.61	-0.6
3,570,904	+		RR42_RS36200	0.64	-0.7
3,570,904	+		RR42_RS36200	0.64	-0.1
3,570,904	+		RR42_RS36200	0.64	+0.6
3,570,904	+		RR42_RS36200	0.64	+1.8
3,570,904	+		RR42_RS36200	0.64	+0.5
3,570,904	+		RR42_RS36200	0.64	-1.0
3,570,904	+		RR42_RS36200	0.64	+1.1
3,570,904	+		RR42_RS36200	0.64	+0.4
3,570,904	+		RR42_RS36200	0.64	+0.7
3,570,904	+		RR42_RS36200	0.64	-0.7
3,570,904	+		RR42_RS36200	0.64	+0.5
3,570,904	+		RR42_RS36200	0.64	+0.9
3,570,904	+		RR42_RS36200	0.64	-0.7
3,570,904	+		RR42_RS36200	0.64	-0.6
3,570,904	+		RR42_RS36200	0.64	+0.0
3,570,905	-		RR42_RS36200	0.64	-0.4
3,570,905	-		RR42_RS36200	0.64	-0.9
3,570,905	-		RR42_RS36200	0.64	+0.0
3,570,905	-		RR42_RS36200	0.64	-1.7
3,570,905	-		RR42_RS36200	0.64	+0.8
3,570,905	-		RR42_RS36200	0.64	+0.6
3,570,905	-		RR42_RS36200	0.64	-0.5
3,570,905	-		RR42_RS36200	0.64	-0.8
3,570,905	-		RR42_RS36200	0.64	+0.3
3,570,906	+		RR42_RS36200	0.64	+0.3
3,570,906	+		RR42_RS36200	0.64	-0.5
3,571,213	-		RR42_RS36200	0.83	+0.3
3,571,213	-		RR42_RS36200	0.83	-0.4
3,571,213	-		RR42_RS36200	0.83	-1.5
3,571,287	+		RR42_RS36200	0.88	+0.5
3,571,287	+		RR42_RS36200	0.88	-0.0
3,571,288	-		RR42_RS36200	0.88	+0.2
3,571,288	-		RR42_RS36200	0.88	-0.3
3,571,288	-		RR42_RS36200	0.88	+1.9
3,571,288	-		RR42_RS36200	0.88	+0.6
3,571,406	+				-0.7
3,571,406	+				+0.7
3,571,407	-				+0.0
3,571,407	-				-0.1
3,571,407	-				+0.5
3,571,513	+				-0.6
3,571,513	+				-0.9
3,571,513	+				-0.9
3,571,514	-				-0.3
3,571,514	-				-0.8
3,571,514	-				+0.5
3,571,740	-				+1.5
3,571,758	-				-0.1
3,571,758	-				+0.8
3,571,787	+				-1.0
3,571,787	+				+0.6
3,571,787	+				+1.5
3,571,787	+				+0.1
3,571,787	+				-1.0
3,571,787	+				+1.2
3,571,787	+				+0.1
3,571,788	-				+0.1
3,571,788	-				+0.9
3,571,788	-				-0.4
3,571,788	-				-0.2
3,571,851	-				+0.0
3,571,906	+				-1.7
3,572,209	+		RR42_RS36205	0.29	-0.1
3,572,209	+		RR42_RS36205	0.29	+0.1
3,572,209	+		RR42_RS36205	0.29	+0.9
3,572,210	-		RR42_RS36205	0.29	+0.8
3,572,210	-		RR42_RS36205	0.29	-1.1
3,572,210	-		RR42_RS36205	0.29	-1.6
3,572,210	-		RR42_RS36205	0.29	+0.4
3,572,221	+		RR42_RS36205	0.30	+0.5
3,572,222	-		RR42_RS36205	0.30	+0.5
3,572,222	-		RR42_RS36205	0.30	-0.8
3,572,222	-		RR42_RS36205	0.30	+2.5
3,572,222	-		RR42_RS36205	0.30	-1.1
3,572,434	+		RR42_RS36205	0.44	+0.2
3,572,608	-		RR42_RS36205	0.55	+1.5
3,572,743	+		RR42_RS36205	0.64	+0.2
3,572,743	+		RR42_RS36205	0.64	-1.0
3,572,743	+		RR42_RS36205	0.64	+1.8
3,572,744	-		RR42_RS36205	0.64	+0.8
3,572,744	-		RR42_RS36205	0.64	-0.3
3,572,744	-		RR42_RS36205	0.64	-0.3
3,572,744	-		RR42_RS36205	0.64	+0.6
3,572,744	-		RR42_RS36205	0.64	+0.6
3,572,744	-		RR42_RS36205	0.64	-0.9
3,572,763	+		RR42_RS36205	0.66	+0.5
3,572,778	+		RR42_RS36205	0.67	-1.7
3,572,845	+		RR42_RS36205	0.71	-1.4
3,572,845	+		RR42_RS36205	0.71	-1.3
3,572,846	-		RR42_RS36205	0.71	-0.7
3,572,846	-		RR42_RS36205	0.71	-0.1
3,572,985	+		RR42_RS36205	0.80	+0.0
3,572,985	+		RR42_RS36205	0.80	+0.3
3,573,277	+				+0.2
3,573,278	-				+0.7
3,573,296	+				-0.6
3,573,297	-				+0.5
3,573,297	-				-0.4
3,573,297	-				-1.6
3,573,298	+				+0.9
3,573,298	+				-1.0
3,573,298	+				+0.9
3,573,298	+				+0.0
3,573,299	-				-1.0
3,573,386	+				-0.7
3,573,387	-				-0.5
3,573,460	+				+0.5
3,573,460	+				-0.9
3,573,461	-				-0.2
3,573,589	+		RR42_RS36210	0.17	+0.9
3,573,777	+		RR42_RS36210	0.31	+1.4
3,573,805	+		RR42_RS36210	0.33	+0.2
3,573,805	+		RR42_RS36210	0.33	-0.2
3,573,806	-		RR42_RS36210	0.33	-0.7
3,573,806	-		RR42_RS36210	0.33	-0.4
3,573,806	-		RR42_RS36210	0.33	-0.3
3,573,839	-		RR42_RS36210	0.35	-1.4
3,573,925	+		RR42_RS36210	0.42	-0.6
3,573,926	-		RR42_RS36210	0.42	-0.3
3,574,064	+		RR42_RS36210	0.52	+0.0
3,574,064	+		RR42_RS36210	0.52	-0.1
3,574,065	-		RR42_RS36210	0.52	+0.3
3,574,102	+		RR42_RS36210	0.55	+0.1
3,574,102	+		RR42_RS36210	0.55	+0.1
3,574,102	+		RR42_RS36210	0.55	+0.0
3,574,105	+		RR42_RS36210	0.55	+0.0
3,574,105	+		RR42_RS36210	0.55	+1.3
3,574,105	+		RR42_RS36210	0.55	-0.7
3,574,178	-		RR42_RS36210	0.61	+1.2
3,574,213	+		RR42_RS36210	0.63	-1.7
3,574,214	-		RR42_RS36210	0.63	-0.2
3,574,228	+		RR42_RS36210	0.64	+0.4
3,574,228	+		RR42_RS36210	0.64	+0.9
3,574,229	-		RR42_RS36210	0.65	-0.2
3,574,261	+		RR42_RS36210	0.67	-2.0
3,574,261	+		RR42_RS36210	0.67	-0.2
3,574,261	+		RR42_RS36210	0.67	-0.6
3,574,262	-		RR42_RS36210	0.67	+0.0
3,574,262	-		RR42_RS36210	0.67	-0.5
3,574,262	-		RR42_RS36210	0.67	+1.1
3,574,262	-		RR42_RS36210	0.67	-0.1