Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36105

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,549,261	+				+0.1
3,549,261	+				+0.3
3,549,262	-				+2.5
3,549,262	-				+0.5
3,549,262	-				-0.0
3,549,309	-				+2.0
3,549,309	-				-1.6
3,549,313	+				-0.4
3,549,313	+				+0.6
3,549,314	-				+0.4
3,549,409	+				+1.1
3,549,409	+				+1.2
3,549,436	+		RR42_RS36100	0.13	-0.2
3,549,554	+		RR42_RS36100	0.30	+1.2
3,549,554	+		RR42_RS36100	0.30	-0.2
3,549,555	-		RR42_RS36100	0.30	-0.0
3,549,679	+		RR42_RS36100	0.48	-0.5
3,549,679	+		RR42_RS36100	0.48	-0.7
3,549,679	+		RR42_RS36100	0.48	-1.1
3,549,766	+		RR42_RS36100	0.61	-0.8
3,549,767	-		RR42_RS36100	0.61	-0.0
3,549,767	-		RR42_RS36100	0.61	+0.4
3,549,767	-		RR42_RS36100	0.61	-0.6
3,549,767	-		RR42_RS36100	0.61	-0.6
3,549,823	+		RR42_RS36100	0.70	+0.1
3,549,839	-		RR42_RS36100	0.72	+1.3
3,549,839	-		RR42_RS36100	0.72	+0.2
3,549,839	-		RR42_RS36100	0.72	+1.3
3,549,895	+		RR42_RS36100	0.80	+0.5
3,549,895	+		RR42_RS36100	0.80	+0.5
3,549,896	-		RR42_RS36100	0.80	-0.1
3,549,913	+		RR42_RS36100	0.83	-0.8
3,549,914	-		RR42_RS36100	0.83	+0.4
3,549,931	+		RR42_RS36100	0.86	-0.5
3,549,931	+		RR42_RS36100	0.86	+0.2
3,549,943	+		RR42_RS36100	0.87	-2.1
3,550,506	+		RR42_RS36105	0.68	+1.1
3,550,507	-		RR42_RS36105	0.69	-0.9
3,550,507	-		RR42_RS36105	0.69	+0.7
3,550,648	+				+0.3
3,550,649	-				-0.5
3,550,693	+				-0.2
3,550,693	+				-0.3
3,550,693	+				+1.8
3,550,694	-				+0.5
3,550,694	-				-1.9
3,550,694	-				-0.1
3,550,694	-				-0.4
3,550,694	-				-0.7
3,550,694	-				-1.2
3,550,694	-				+0.4
3,550,695	+				-0.7
3,550,695	+				+1.0
3,550,696	-				+0.5
3,550,883	+				-1.7
3,550,884	-				-2.0
3,550,975	+		RR42_RS36110	0.22	-2.0
3,550,976	-		RR42_RS36110	0.22	-1.7
3,550,976	-		RR42_RS36110	0.22	-1.6
3,551,128	-		RR42_RS36110	0.49	-1.5
3,551,162	+		RR42_RS36110	0.55	-1.5
3,551,162	+		RR42_RS36110	0.55	+0.2
3,551,575	+				-0.7
3,551,575	+				-0.7
3,551,575	+				-0.2
3,551,575	+				-0.1
3,551,576	-				-0.2
3,551,576	-				-0.1
3,551,576	-				+0.4
3,551,576	-				-0.8
3,551,576	-				+0.6
3,551,576	-				-0.5
3,551,580	+				-0.3