Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35370

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,389,301	-				+0.9
3,389,301	-				+3.0
3,389,395	+				-0.9
3,389,398	-				+1.4
3,389,451	+		RR42_RS35360	0.19	+1.1
3,389,451	+		RR42_RS35360	0.19	-1.3
3,389,452	-		RR42_RS35360	0.20	+0.9
3,389,452	-		RR42_RS35360	0.20	+0.3
3,389,452	-		RR42_RS35360	0.20	+1.3
3,389,452	-		RR42_RS35360	0.20	-0.1
3,389,701	+		RR42_RS35360	0.86	-1.4
3,389,756	+				+0.3
3,389,756	+				+0.9
3,389,757	-				-1.1
3,389,757	-				-0.1
3,389,823	+				+0.3
3,389,823	+				-0.4
3,389,901	-		RR42_RS35365	0.23	-0.3
3,389,987	-		RR42_RS35365	0.48	-0.1
3,389,987	-		RR42_RS35365	0.48	-0.0
3,389,987	-		RR42_RS35365	0.48	+0.2
3,390,074	-		RR42_RS35365	0.73	+0.4
3,390,074	-		RR42_RS35365	0.73	-0.6
3,390,174	-				+0.5
3,390,182	-				+1.4
3,390,192	+				+0.6
3,390,252	+				+1.1
3,390,285	+				+0.3
3,390,285	+				+1.4
3,390,286	-				-1.9
3,390,468	+		RR42_RS35370	0.18	-2.4
3,390,769	+		RR42_RS35370	0.41	-0.5
3,390,841	+		RR42_RS35370	0.47	+1.9
3,390,841	+		RR42_RS35370	0.47	-1.1
3,390,897	+		RR42_RS35370	0.51	-0.9
3,390,898	-		RR42_RS35370	0.51	+2.0
3,391,020	+		RR42_RS35370	0.61	+0.6
3,391,020	+		RR42_RS35370	0.61	+1.4
3,391,020	+		RR42_RS35370	0.61	+1.7
3,391,021	-		RR42_RS35370	0.61	+0.1
3,391,021	-		RR42_RS35370	0.61	-0.8
3,391,056	+		RR42_RS35370	0.64	-1.2
3,391,081	+		RR42_RS35370	0.66	+0.6
3,391,169	-		RR42_RS35370	0.72	-1.0
3,391,169	-		RR42_RS35370	0.72	+0.5
3,391,298	-		RR42_RS35370	0.82	-1.3
3,391,371	+		RR42_RS35370	0.88	-0.2
3,391,371	+		RR42_RS35370	0.88	-0.3
3,391,372	-		RR42_RS35370	0.88	-0.4
3,391,372	-		RR42_RS35370	0.88	+0.9
3,391,502	+				-0.6
3,391,529	+				+0.1
3,391,529	+				+0.1
3,391,594	+				+0.9
3,391,594	+				-1.0
3,391,595	-				-1.5
3,391,667	+				-0.9
3,391,667	+				-0.1
3,391,667	+				+0.2
3,391,667	+				-0.2
3,391,668	-				+0.5
3,391,668	-				+0.9
3,391,671	+				+0.4
3,391,739	+		RR42_RS35375	0.10	-0.1
3,391,814	+		RR42_RS35375	0.16	+0.3
3,391,814	+		RR42_RS35375	0.16	-0.9
3,391,815	-		RR42_RS35375	0.16	+0.0
3,391,835	+		RR42_RS35375	0.17	-2.1
3,391,899	+		RR42_RS35375	0.22	-0.1
3,391,900	-		RR42_RS35375	0.22	-0.1
3,391,901	+		RR42_RS35375	0.22	+0.2
3,391,901	+		RR42_RS35375	0.22	+0.4
3,391,989	+		RR42_RS35375	0.29	-0.5
3,391,989	+		RR42_RS35375	0.29	-1.4
3,392,034	+		RR42_RS35375	0.32	+0.7
3,392,103	+		RR42_RS35375	0.37	-0.5
3,392,438	+		RR42_RS35375	0.62	-2.6
3,392,438	+		RR42_RS35375	0.62	-0.0
3,392,438	+		RR42_RS35375	0.62	+0.6
3,392,438	+		RR42_RS35375	0.62	+0.6
3,392,439	-		RR42_RS35375	0.62	-1.9
3,392,488	+		RR42_RS35375	0.65	-1.5
3,392,488	+		RR42_RS35375	0.65	+0.4
3,392,488	+		RR42_RS35375	0.65	+0.4
3,392,489	-		RR42_RS35375	0.65	-0.9
3,392,515	+		RR42_RS35375	0.67	+0.5