Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34940

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,289,023	+		RR42_RS34930	0.80	+0.1
3,289,086	+		RR42_RS34930	0.85	-0.6
3,289,086	+		RR42_RS34930	0.85	-0.5
3,289,087	-		RR42_RS34930	0.85	-0.8
3,289,087	-		RR42_RS34930	0.85	-0.0
3,289,087	-		RR42_RS34930	0.85	+1.4
3,289,087	-		RR42_RS34930	0.85	+1.8
3,289,087	-		RR42_RS34930	0.85	-0.2
3,289,087	-		RR42_RS34930	0.85	-1.0
3,289,228	+				-1.5
3,289,228	+				-0.6
3,289,229	-				-0.5
3,289,230	+				-0.1
3,289,230	+				+1.0
3,289,231	-				-0.8
3,289,231	-				+3.8
3,289,231	-				-0.0
3,289,297	-				-0.5
3,289,531	+		RR42_RS34935	0.70	+0.6
3,289,549	+		RR42_RS34935	0.76	-1.6
3,289,549	+		RR42_RS34935	0.76	+0.5
3,289,549	+		RR42_RS34935	0.76	+0.5
3,289,606	+				-0.3
3,289,606	+				-0.5
3,289,769	-				-0.9
3,290,259	+		RR42_RS34940	0.76	+0.9
3,290,259	+		RR42_RS34940	0.76	+0.5
3,290,664	+		RR42_RS34945	0.32	+0.0
3,290,665	-		RR42_RS34945	0.32	+0.6
3,290,940	+		RR42_RS34945	0.75	+0.4
3,291,197	+				+0.6
3,291,197	+				-1.1
3,291,197	+				-0.9
3,291,198	-				-1.9
3,291,198	-				+0.8
3,291,203	+				-1.0
3,291,203	+				+0.3
3,291,204	-				+0.0
3,291,378	+		RR42_RS34950	0.16	+0.4
3,291,396	+		RR42_RS34950	0.17	-0.2
3,291,396	+		RR42_RS34950	0.17	-0.0
3,291,397	-		RR42_RS34950	0.17	+0.3
3,291,397	-		RR42_RS34950	0.17	+0.5
3,291,398	+		RR42_RS34950	0.17	-0.5