Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34555

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,194,372	+		RR42_RS34550	0.81	-0.1
3,194,373	-		RR42_RS34550	0.81	+1.7
3,194,585	+		RR42_RS34550	0.89	-0.1
3,194,585	+		RR42_RS34550	0.89	+0.3
3,194,586	-		RR42_RS34550	0.89	-0.2
3,194,586	-		RR42_RS34550	0.89	-0.2
3,194,586	-		RR42_RS34550	0.89	-0.2
3,194,592	+		RR42_RS34550	0.90	+1.1
3,194,592	+		RR42_RS34550	0.90	-0.9
3,194,593	-		RR42_RS34550	0.90	+0.6
3,194,603	+				-0.2
3,194,603	+				+0.4
3,194,603	+				+0.5
3,194,794	+				+0.6
3,194,836	-				+2.4
3,194,895	+				-0.5
3,194,994	-				+1.0
3,195,159	-				+0.0
3,195,185	-				-0.1
3,195,200	+				-1.0
3,195,200	+				-0.1
3,195,314	-				+0.6
3,195,326	-				-1.0
3,195,364	+		RR42_RS34555	0.13	-1.0
3,195,375	-		RR42_RS34555	0.14	-0.8
3,195,375	-		RR42_RS34555	0.14	-0.2
3,195,688	-		RR42_RS34555	0.68	-1.5
3,195,863	-				-1.8
3,195,988	+				+0.2
3,195,988	+				+1.4
3,195,988	+				+0.7
3,195,988	+				-0.3
3,195,988	+				+0.0
3,195,988	+				+0.8
3,195,989	-				-0.9
3,195,989	-				-1.4
3,195,989	-				+0.4
3,195,989	-				+0.2
3,195,989	-				-0.4
3,195,989	-				-1.8
3,196,167	+				-0.4
3,196,189	-				+0.4
3,196,408	+		RR42_RS34560	0.24	+0.1
3,196,498	+		RR42_RS34560	0.35	+0.5
3,196,498	+		RR42_RS34560	0.35	+0.2
3,196,498	+		RR42_RS34560	0.35	-0.8
3,196,499	-		RR42_RS34560	0.35	+0.8
3,196,499	-		RR42_RS34560	0.35	+1.2
3,196,499	-				+0.3
3,196,499	-		RR42_RS34560	0.35	-2.2
3,196,499	-		RR42_RS34560	0.35	-1.2
3,196,499	-		RR42_RS34560	0.35	-0.0
3,196,502	+		RR42_RS34560	0.35	+0.7
3,196,502	+		RR42_RS34560	0.35	-1.6
3,196,583	+		RR42_RS34560	0.44	+0.3
3,196,651	+		RR42_RS34560	0.52	-1.7
3,196,651	+		RR42_RS34560	0.52	+2.1