Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34550

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,191,813	+				+0.8
3,191,813	+				+0.6
3,191,844	-				-0.4
3,191,853	-				-0.8
3,191,853	-				+1.0
3,192,009	+				+0.6
3,192,387	-				+0.8
3,192,398	+				-1.0
3,192,398	+				+0.0
3,192,500	+				+0.5
3,192,579	+				-0.6
3,192,581	+				+0.1
3,192,591	+				-0.7
3,192,593	+				+0.7
3,192,593	+				-0.5
3,192,593	+				-2.0
3,192,593	+				-0.5
3,192,593	+				+2.1
3,192,593	+				+0.2
3,192,594	-				-1.2
3,192,594	-				-1.2
3,192,695	+		RR42_RS34550	0.13	-2.2
3,192,732	+		RR42_RS34550	0.14	+0.8
3,192,733	-		RR42_RS34550	0.14	-0.8
3,192,809	+		RR42_RS34550	0.17	+0.6
3,192,890	+		RR42_RS34550	0.21	+0.0
3,192,890	+		RR42_RS34550	0.21	+0.2
3,192,891	-		RR42_RS34550	0.21	+0.1
3,192,891	-		RR42_RS34550	0.21	-0.9
3,192,891	-		RR42_RS34550	0.21	-0.5
3,192,990	-		RR42_RS34550	0.25	+0.3
3,192,990	-		RR42_RS34550	0.25	-1.2
3,193,008	-		RR42_RS34550	0.25	+0.6
3,193,008	-		RR42_RS34550	0.25	-0.6
3,193,175	+		RR42_RS34550	0.32	-0.4
3,193,176	-		RR42_RS34550	0.32	-0.8
3,193,176	-		RR42_RS34550	0.32	+0.0
3,193,176	-		RR42_RS34550	0.32	+0.3
3,193,206	-		RR42_RS34550	0.33	+0.8
3,193,331	+		RR42_RS34550	0.38	+0.0
3,193,331	+		RR42_RS34550	0.38	-0.7
3,193,332	-		RR42_RS34550	0.38	-0.8
3,193,406	+		RR42_RS34550	0.41	+0.5
3,193,409	+		RR42_RS34550	0.42	-0.6
3,193,410	-		RR42_RS34550	0.42	-0.8
3,193,410	-		RR42_RS34550	0.42	+0.1
3,193,410	-		RR42_RS34550	0.42	-2.3
3,193,479	-		RR42_RS34550	0.44	-0.1
3,193,511	+		RR42_RS34550	0.46	-2.1
3,193,511	+		RR42_RS34550	0.46	-1.7
3,193,598	+		RR42_RS34550	0.49	-1.0
3,193,598	+		RR42_RS34550	0.49	-0.0
3,193,633	-		RR42_RS34550	0.51	+0.2
3,193,754	+		RR42_RS34550	0.56	+0.5
3,193,837	+		RR42_RS34550	0.59	-0.9
3,193,837	+		RR42_RS34550	0.59	-1.4
3,193,925	+		RR42_RS34550	0.63	-1.1
3,193,925	+		RR42_RS34550	0.63	-0.0
3,194,082	+		RR42_RS34550	0.69	-1.8
3,194,124	+		RR42_RS34550	0.71	+1.3
3,194,372	+		RR42_RS34550	0.81	-0.1
3,194,373	-		RR42_RS34550	0.81	+1.7
3,194,585	+		RR42_RS34550	0.89	-0.1
3,194,585	+		RR42_RS34550	0.89	+0.3
3,194,586	-		RR42_RS34550	0.89	-0.2
3,194,586	-		RR42_RS34550	0.89	-0.2
3,194,586	-		RR42_RS34550	0.89	-0.2
3,194,592	+		RR42_RS34550	0.90	+1.1
3,194,592	+		RR42_RS34550	0.90	-0.9
3,194,593	-		RR42_RS34550	0.90	+0.6
3,194,603	+				-0.2
3,194,603	+				+0.4
3,194,603	+				+0.5
3,194,794	+				+0.6
3,194,836	-				+2.4
3,194,895	+				-0.5
3,194,994	-				+1.0
3,195,159	-				+0.0
3,195,185	-				-0.1
3,195,200	+				-1.0
3,195,200	+				-0.1
3,195,314	-				+0.6
3,195,326	-				-1.0
3,195,364	+		RR42_RS34555	0.13	-1.0
3,195,375	-		RR42_RS34555	0.14	-0.8
3,195,375	-		RR42_RS34555	0.14	-0.2
3,195,688	-		RR42_RS34555	0.68	-1.5