Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34255

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,112,343	+		RR42_RS34250	0.34	+0.4
3,112,343	+		RR42_RS34250	0.34	-0.1
3,112,343	+		RR42_RS34250	0.34	+0.5
3,112,344	-		RR42_RS34250	0.34	+0.4
3,112,344	-		RR42_RS34250	0.34	-0.3
3,112,344	-		RR42_RS34250	0.34	+1.7
3,112,344	-		RR42_RS34250	0.34	+0.6
3,112,358	+		RR42_RS34250	0.35	+0.0
3,112,359	-		RR42_RS34250	0.36	+0.5
3,112,499	-		RR42_RS34250	0.51	+0.0
3,112,554	+		RR42_RS34250	0.57	-1.0
3,112,625	+		RR42_RS34250	0.65	-0.3
3,112,625	+		RR42_RS34250	0.65	+1.6
3,112,625	+		RR42_RS34250	0.65	-1.0
3,112,626	-		RR42_RS34250	0.65	-1.3
3,112,626	-		RR42_RS34250	0.65	+0.9
3,112,626	-		RR42_RS34250	0.65	+0.7
3,112,626	-		RR42_RS34250	0.65	+0.0
3,112,626	-		RR42_RS34250	0.65	+0.3
3,112,626	-		RR42_RS34250	0.65	+0.2
3,112,670	+		RR42_RS34250	0.70	-0.8
3,112,768	-		RR42_RS34250	0.81	+0.3
3,112,785	-		RR42_RS34250	0.83	-0.4
3,112,941	-				+0.1
3,112,941	-				+0.2
3,113,050	+				-1.5
3,113,050	+				-0.1
3,113,051	-				+1.1
3,113,198	-				+1.1
3,113,215	+				+0.6
3,113,215	+				+1.3
3,113,215	+				+0.2
3,113,224	+				+0.7
3,113,264	-				+0.6
3,113,606	-		RR42_RS34255	0.29	-1.0
3,113,875	-		RR42_RS34255	0.47	+1.5
3,113,971	+		RR42_RS34255	0.53	+0.0
3,114,101	-		RR42_RS34255	0.62	+0.7
3,114,223	+		RR42_RS34255	0.70	+2.1
3,114,224	-		RR42_RS34255	0.70	-1.3
3,114,310	+		RR42_RS34255	0.76	+0.0
3,114,310	+		RR42_RS34255	0.76	+0.5
3,114,310	+		RR42_RS34255	0.76	-1.1
3,114,310	+		RR42_RS34255	0.76	+1.8
3,114,311	-		RR42_RS34255	0.76	-0.5
3,114,311	-		RR42_RS34255	0.76	-0.8
3,114,442	+		RR42_RS34255	0.84	-0.4
3,114,442	+		RR42_RS34255	0.84	+0.4
3,114,535	+				+0.3
3,114,536	-				+0.6
3,114,571	+				+0.6
3,114,571	+				-0.4
3,114,682	+				-0.1
3,115,001	+		RR42_RS34260	0.20	+0.0
3,115,002	-		RR42_RS34260	0.20	-1.8
3,115,002	-		RR42_RS34260	0.20	+0.3
3,115,146	-		RR42_RS34260	0.34	+0.6
3,115,172	+		RR42_RS34260	0.37	-0.5
3,115,172	+		RR42_RS34260	0.37	+0.0
3,115,173	-		RR42_RS34260	0.37	-0.5
3,115,173	-		RR42_RS34260	0.37	-0.3
3,115,173	-		RR42_RS34260	0.37	+0.0
3,115,193	+		RR42_RS34260	0.39	-1.2
3,115,353	-		RR42_RS34260	0.54	-0.7
3,115,353	-		RR42_RS34260	0.54	+0.5
3,115,642	+		RR42_RS34260	0.82	+1.2
3,115,643	-		RR42_RS34260	0.83	-0.9