Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34075

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
3,073,573	+		RR42_RS34070	0.52	-2.0
3,073,579	+		RR42_RS34070	0.53	-2.1
3,073,579	+		RR42_RS34070	0.53	-1.0
3,073,631	+		RR42_RS34070	0.58	-0.7
3,073,632	-		RR42_RS34070	0.58	+0.2
3,073,633	+		RR42_RS34070	0.58	+0.3
3,073,633	+		RR42_RS34070	0.58	-0.0
3,073,815	+		RR42_RS34070	0.76	-0.2
3,073,815	+		RR42_RS34070	0.76	+2.3
3,073,816	-		RR42_RS34070	0.77	+2.0
3,073,866	+		RR42_RS34070	0.82	-0.9
3,073,867	-		RR42_RS34070	0.82	+0.7
3,073,871	+		RR42_RS34070	0.82	+0.7
3,073,871	+		RR42_RS34070	0.82	+1.5
3,073,931	-		RR42_RS34070	0.88	+0.4
3,073,931	-		RR42_RS34070	0.88	-2.4
3,073,931	-		RR42_RS34070	0.88	-0.5
3,074,001	-				+0.4
3,074,069	-				-0.9
3,074,069	-				+0.1
3,074,069	-				+0.0
3,074,069	-				+0.7
3,074,147	-				-0.1
3,074,147	-				-0.6
3,074,223	+				+1.6
3,074,351	+				+0.6
3,074,351	+				-2.1
3,074,351	+				+0.5
3,074,352	-				+1.3
3,074,488	+		RR42_RS34075	0.38	-1.4
3,074,488	+		RR42_RS34075	0.38	+1.0
3,074,488	+		RR42_RS34075	0.38	+0.1
3,074,489	-		RR42_RS34075	0.38	-1.7
3,074,520	+		RR42_RS34075	0.46	+0.1
3,074,521	-		RR42_RS34075	0.46	+0.9
3,074,555	+		RR42_RS34075	0.55	+2.3
3,074,555	+		RR42_RS34075	0.55	-1.5
3,074,595	+		RR42_RS34075	0.66	-0.5
3,074,596	-		RR42_RS34075	0.66	+0.5
3,074,596	-		RR42_RS34075	0.66	+1.7
3,074,598	+		RR42_RS34075	0.67	+2.9
3,074,598	+		RR42_RS34075	0.67	+1.2
3,074,598	+		RR42_RS34075	0.67	+0.3
3,074,755	+				+0.0
3,074,877	-				+1.3
3,074,877	-				+0.3
3,074,877	-				-0.2
3,074,945	+		RR42_RS34080	0.16	-0.4
3,074,945	+		RR42_RS34080	0.16	-1.4
3,074,946	-		RR42_RS34080	0.16	-0.2
3,074,946	-		RR42_RS34080	0.16	+0.2
3,074,946	-		RR42_RS34080	0.16	+0.7
3,075,086	+		RR42_RS34080	0.32	+0.4
3,075,087	-		RR42_RS34080	0.33	+0.2
3,075,087	-		RR42_RS34080	0.33	+0.7
3,075,241	+		RR42_RS34080	0.50	-1.3
3,075,242	-		RR42_RS34080	0.51	-0.4
3,075,260	-		RR42_RS34080	0.53	-0.0
3,075,533	+		RR42_RS34080	0.84	+0.3
3,075,534	-		RR42_RS34080	0.85	+0.8
3,075,535	+		RR42_RS34080	0.85	-0.5
3,075,535	+		RR42_RS34080	0.85	-0.0
3,075,535	+		RR42_RS34080	0.85	-0.0
3,075,535	+		RR42_RS34080	0.85	-1.1
3,075,535	+		RR42_RS34080	0.85	-0.2
3,075,535	+		RR42_RS34080	0.85	+0.7
3,075,536	-		RR42_RS34080	0.85	+1.3
3,075,587	+				-0.3
3,075,587	+				+0.2
3,075,587	+				+0.5
3,075,587	+				-0.7
3,075,587	+				-1.5
3,075,587	+				-1.2
3,075,587	+				-0.6
3,075,588	-				-0.9
3,075,588	-				+0.5
3,075,588	-				+1.0
3,075,588	-				+0.4
3,075,588	-				-0.8
3,075,656	-				-0.7