Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32555

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
2,698,498	-				+0.9
2,698,861	-		RR42_RS32550	0.42	+0.3
2,698,861	-		RR42_RS32550	0.42	+0.6
2,698,949	+		RR42_RS32550	0.51	-1.0
2,698,949	+		RR42_RS32550	0.51	+0.1
2,699,027	+		RR42_RS32550	0.59	+1.2
2,699,117	+		RR42_RS32550	0.69	-0.0
2,699,118	-		RR42_RS32550	0.69	+0.6
2,699,247	-		RR42_RS32550	0.82	-0.8
2,699,440	+				+0.7
2,699,440	+				+0.7
2,699,441	-				-0.7
2,699,441	-				-0.2
2,699,442	+				-0.3
2,699,443	-				+1.6
2,699,443	-				+1.1
2,699,549	-				+0.4
2,699,549	-				+0.2
2,700,191	-		RR42_RS32555	0.56	-0.7
2,701,019	+		RR42_RS32560	0.12	-0.6
2,701,046	+		RR42_RS32560	0.14	-1.2
2,701,160	+		RR42_RS32560	0.25	-1.2
2,701,250	+		RR42_RS32560	0.33	-1.5
2,701,251	-		RR42_RS32560	0.33	+0.6
2,701,368	-		RR42_RS32560	0.44	-0.2
2,701,481	+		RR42_RS32560	0.54	-0.8
2,701,513	-		RR42_RS32560	0.57	-0.4
2,701,513	-		RR42_RS32560	0.57	-0.0
2,701,520	+		RR42_RS32560	0.58	-0.5
2,701,520	+		RR42_RS32560	0.58	-2.7
2,701,521	-		RR42_RS32560	0.58	-1.1
2,701,521	-		RR42_RS32560	0.58	-0.6
2,701,521	-		RR42_RS32560	0.58	+0.1
2,701,521	-		RR42_RS32560	0.58	-1.1
2,701,521	-		RR42_RS32560	0.58	-0.1
2,701,546	-		RR42_RS32560	0.60	-0.5
2,701,546	-		RR42_RS32560	0.60	-0.7
2,701,556	+		RR42_RS32560	0.61	-0.4
2,701,556	+		RR42_RS32560	0.61	-0.1
2,701,556	+		RR42_RS32560	0.61	-0.3
2,701,557	-		RR42_RS32560	0.61	-0.1
2,701,557	-		RR42_RS32560	0.61	-0.4
2,701,557	-		RR42_RS32560	0.61	-0.9
2,701,557	-		RR42_RS32560	0.61	+0.4
2,701,557	-		RR42_RS32560	0.61	+1.2
2,701,560	+		RR42_RS32560	0.61	-0.7
2,701,635	-		RR42_RS32560	0.68	-0.3
2,701,635	-		RR42_RS32560	0.68	-0.6