Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32420

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
2,667,295	+		RR42_RS32415	0.24	+2.1
2,667,379	+		RR42_RS32415	0.30	-0.3
2,667,421	+		RR42_RS32415	0.34	-0.2
2,667,422	-		RR42_RS32415	0.34	+1.8
2,667,422	-		RR42_RS32415	0.34	+1.1
2,667,422	-		RR42_RS32415	0.34	+0.3
2,667,422	-		RR42_RS32415	0.34	+1.6
2,667,574	+		RR42_RS32415	0.46	-0.7
2,667,575	-		RR42_RS32415	0.46	-0.8
2,667,631	+		RR42_RS32415	0.51	+0.5
2,667,632	-		RR42_RS32415	0.51	+0.2
2,668,025	-		RR42_RS32415	0.83	+0.5
2,668,480	+				-1.0
2,668,480	+				+0.7
2,668,720	+		RR42_RS32420	0.15	-0.3
2,668,721	-		RR42_RS32420	0.15	+1.0
2,668,721	-		RR42_RS32420	0.15	+0.2
2,668,795	+		RR42_RS32420	0.17	-0.9
2,668,796	-		RR42_RS32420	0.17	+0.7
2,668,796	-		RR42_RS32420	0.17	+0.3
2,668,837	+		RR42_RS32420	0.18	+0.1
2,669,013	+		RR42_RS32420	0.24	-1.0
2,669,074	+		RR42_RS32420	0.26	-1.9
2,669,075	-		RR42_RS32420	0.26	+0.3
2,669,075	-		RR42_RS32420	0.26	-0.7
2,669,076	+		RR42_RS32420	0.26	-0.9
2,669,092	+		RR42_RS32420	0.26	-0.4
2,669,092	+		RR42_RS32420	0.26	-0.3
2,669,092	+		RR42_RS32420	0.26	-0.1
2,669,093	-		RR42_RS32420	0.26	+0.4
2,669,093	-		RR42_RS32420	0.26	+0.1
2,669,093	-		RR42_RS32420	0.26	-2.0
2,669,198	-		RR42_RS32420	0.29	+0.4
2,669,231	-		RR42_RS32420	0.30	+0.3
2,669,317	+		RR42_RS32420	0.33	+0.7
2,669,317	+		RR42_RS32420	0.33	+2.1
2,669,318	-		RR42_RS32420	0.33	-0.4
2,669,318	-		RR42_RS32420	0.33	+0.9
2,669,881	+		RR42_RS32420	0.51	+0.8
2,669,900	+		RR42_RS32420	0.51	-0.4
2,670,037	+		RR42_RS32420	0.56	+0.7
2,670,220	+		RR42_RS32420	0.61	-0.7
2,670,220	+		RR42_RS32420	0.61	-0.8
2,670,221	-		RR42_RS32420	0.61	-0.1
2,670,517	+		RR42_RS32420	0.70	-0.0
2,670,518	-		RR42_RS32420	0.70	+0.8
2,670,518	-		RR42_RS32420	0.70	-1.3
2,670,518	-		RR42_RS32420	0.70	+0.3
2,670,562	+		RR42_RS32420	0.72	-0.0
2,670,563	-		RR42_RS32420	0.72	-0.9
2,670,617	-		RR42_RS32420	0.74	-1.4
2,670,617	-		RR42_RS32420	0.74	-1.9
2,670,877	+		RR42_RS32420	0.82	-1.4
2,670,878	-		RR42_RS32420	0.82	+0.2
2,670,878	-		RR42_RS32420	0.82	-1.4
2,670,922	+		RR42_RS32420	0.83	-0.9
2,670,923	-		RR42_RS32420	0.83	-0.2
2,670,923	-		RR42_RS32420	0.83	+0.1
2,671,589	+				-0.4
2,671,760	+		RR42_RS32425	0.19	-1.5
2,671,761	-		RR42_RS32425	0.20	+2.1
2,672,019	-		RR42_RS32425	0.37	-0.3
2,672,092	-		RR42_RS32425	0.42	-0.1