Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31830

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
2,516,902	+				+0.1
2,516,902	+				+0.2
2,517,212	+		RR42_RS31825	0.43	-0.5
2,517,213	-		RR42_RS31825	0.43	-0.4
2,517,341	-		RR42_RS31825	0.58	-0.1
2,517,554	+		RR42_RS31825	0.83	-0.5
2,517,554	+		RR42_RS31825	0.83	-0.1
2,517,686	+				-0.9
2,517,877	+				+1.5
2,518,426	-		RR42_RS31830	0.75	+0.1
2,518,540	-		RR42_RS31830	0.89	+1.3
2,518,544	-		RR42_RS31830	0.90	+1.6
2,518,728	-		RR42_RS31835	0.11	+0.6
2,518,805	-		RR42_RS31835	0.19	+0.1
2,518,805	-		RR42_RS31835	0.19	-0.2
2,518,856	+		RR42_RS31835	0.25	+1.6
2,518,856	+		RR42_RS31835	0.25	+2.1
2,518,857	-		RR42_RS31835	0.25	-0.9
2,518,857	-		RR42_RS31835	0.25	+0.4
2,519,019	+		RR42_RS31835	0.44	+0.5
2,519,020	-		RR42_RS31835	0.44	-0.4
2,519,020	-		RR42_RS31835	0.44	+2.5
2,519,021	+		RR42_RS31835	0.44	-0.7
2,519,021	+		RR42_RS31835	0.44	+1.5
2,519,022	-		RR42_RS31835	0.45	-0.2
2,519,109	-		RR42_RS31835	0.55	-0.1
2,519,109	-		RR42_RS31835	0.55	-0.9
2,519,602	-				+1.5