Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31390

Experiment: R2A with Paraquat dichloride 0.064 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.064 mg/ml
2,417,939	+				-0.3
2,417,940	-				-0.5
2,417,940	-				+0.9
2,417,956	-				-0.1
2,418,020	+				+0.9
2,418,020	+				-0.8
2,418,021	-				-1.1
2,418,177	+		RR42_RS31385	0.26	+0.7
2,418,264	-		RR42_RS31385	0.38	-1.1
2,418,274	-		RR42_RS31385	0.40	+0.7
2,418,312	+		RR42_RS31385	0.45	+1.1
2,418,312	+		RR42_RS31385	0.45	+0.6
2,418,437	+		RR42_RS31385	0.62	-1.6
2,418,438	-		RR42_RS31385	0.62	-0.1
2,418,438	-		RR42_RS31385	0.62	+1.1
2,418,438	-		RR42_RS31385	0.62	-0.1
2,418,576	-		RR42_RS31385	0.82	-0.1
2,418,576	-		RR42_RS31385	0.82	+0.7
2,418,614	+		RR42_RS31385	0.87	+0.8
2,418,614	+		RR42_RS31385	0.87	-0.6
2,418,615	-		RR42_RS31385	0.87	-0.3
2,418,771	+				-0.3
2,418,771	+				-0.8
2,418,772	-				+0.2
2,418,772	-				-2.2
2,418,772	-				-0.5
2,418,860	+				+0.0
2,418,863	-				-0.0
2,418,867	+				-0.6
2,418,867	+				-0.7
2,418,868	-				+0.3
2,418,868	-				+0.3
2,418,870	-				+0.3
2,419,210	+		RR42_RS31390	0.28	-0.4
2,419,210	+		RR42_RS31390	0.28	-0.5
2,419,211	-		RR42_RS31390	0.28	-0.8
2,419,242	+		RR42_RS31390	0.31	+0.5
2,419,242	+		RR42_RS31390	0.31	-1.4
2,419,243	-		RR42_RS31390	0.31	-0.9
2,419,479	-		RR42_RS31390	0.56	+0.4
2,419,589	+		RR42_RS31390	0.67	+0.4
2,419,589	+		RR42_RS31390	0.67	+1.6
2,419,589	+		RR42_RS31390	0.67	+1.0
2,419,590	-		RR42_RS31390	0.67	+0.2
2,419,595	+		RR42_RS31390	0.67	-0.8
2,419,595	+		RR42_RS31390	0.67	-1.2
2,419,595	+		RR42_RS31390	0.67	-0.4
2,419,596	-		RR42_RS31390	0.68	-2.4
2,419,703	+		RR42_RS31390	0.79	-1.1
2,419,703	+		RR42_RS31390	0.79	+0.5
2,419,704	-		RR42_RS31390	0.79	-1.4
2,419,704	-		RR42_RS31390	0.79	-1.0
2,419,895	+				+0.5
2,419,895	+				+0.2
2,419,895	+				+0.7
2,419,896	-				+0.2
2,419,899	+				+0.1
2,419,899	+				-0.2
2,419,899	+				-1.1
2,419,899	+				-1.6
2,419,900	-				+1.1
2,419,900	-				-0.5
2,419,933	+				-0.5
2,419,941	+				+0.2
2,419,941	+				+0.6
2,419,941	+				-0.8
2,419,941	+				+0.2
2,420,068	+				+1.1
2,420,069	-				-0.5
2,420,069	-				+0.3
2,420,069	-				-0.0
2,420,098	+				+0.7
2,420,098	+				+0.1
2,420,098	+				+1.5
2,420,099	-				+0.1
2,420,175	+				+0.2
2,420,175	+				+0.7
2,420,355	+		RR42_RS31395	0.10	+0.4
2,420,356	-		RR42_RS31395	0.11	+0.7
2,420,356	-		RR42_RS31395	0.11	+0.8
2,420,425	+		RR42_RS31395	0.20	-0.5
2,420,562	+		RR42_RS31395	0.40	+0.3
2,420,562	+		RR42_RS31395	0.40	+2.1
2,420,562	+		RR42_RS31395	0.40	-2.5
2,420,562	+		RR42_RS31395	0.40	+0.3
2,420,563	-		RR42_RS31395	0.40	-0.5
2,420,563	-		RR42_RS31395	0.40	+0.6
2,420,563	-		RR42_RS31395	0.40	-0.7
2,420,563	-		RR42_RS31395	0.40	+1.6
2,420,670	-		RR42_RS31395	0.56	-1.5
2,420,748	+		RR42_RS31395	0.67	-1.8
2,420,749	-		RR42_RS31395	0.67	+0.1
2,420,838	+		RR42_RS31395	0.80	-1.4
2,420,839	-		RR42_RS31395	0.80	-0.3
2,420,857	+		RR42_RS31395	0.83	-2.0